RNA–Protein interactions for RNA: ENST00000534254.5

CHID1-224, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-224ENST00000534254 CUL7Q14999 1698 aa23.87■■□□□ 1.41
CHID1-224ENST00000534254 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
CHID1-224ENST00000534254 IGF1RP08069 1367 aa23.83■■□□□ 1.41
CHID1-224ENST00000534254 KIF27Q86VH2 1401 aa23.82■■□□□ 1.4
CHID1-224ENST00000534254 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
CHID1-224ENST00000534254 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
CHID1-224ENST00000534254 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
CHID1-224ENST00000534254 TTBK1Q5TCY1 1321 aaPredicted RBP23.75■■□□□ 1.39
CHID1-224ENST00000534254 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
CHID1-224ENST00000534254 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
CHID1-224ENST00000534254 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
CHID1-224ENST00000534254 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
CHID1-224ENST00000534254 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
CHID1-224ENST00000534254 NPM1P06748 294 aaKnown RBP eCLIP23.66■■□□□ 1.38
CHID1-224ENST00000534254 IQGAP2Q13576 1575 aa23.63■■□□□ 1.37
CHID1-224ENST00000534254 PTPRGP23470 1445 aa23.59■■□□□ 1.37
CHID1-224ENST00000534254 KDM6BO15054 1643 aa23.55■■□□□ 1.36
CHID1-224ENST00000534254 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
CHID1-224ENST00000534254 CARMIL2Q6F5E8 1435 aa23.51■■□□□ 1.35
CHID1-224ENST00000534254 DISP1Q96F81 1524 aa23.51■■□□□ 1.35
CHID1-224ENST00000534254 PPRC1Q5VV67 1664 aaKnown RBP23.49■■□□□ 1.35
CHID1-224ENST00000534254 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
CHID1-224ENST00000534254 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
CHID1-224ENST00000534254 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
CHID1-224ENST00000534254 KIAA0556O60303 1618 aa23.44■■□□□ 1.34
CHID1-224ENST00000534254 ASXL2Q76L83 1435 aa23.44■■□□□ 1.34
CHID1-224ENST00000534254 ZCCHC11Q5TAX3 1644 aaKnown RBP23.42■■□□□ 1.34
CHID1-224ENST00000534254 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
CHID1-224ENST00000534254 UACAQ9BZF9 1416 aa23.4■■□□□ 1.34
CHID1-224ENST00000534254 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
CHID1-224ENST00000534254 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
CHID1-224ENST00000534254 GLI2P10070 1586 aa23.35■■□□□ 1.33
CHID1-224ENST00000534254 MAP3K4Q9Y6R4 1608 aa23.32■■□□□ 1.32
CHID1-224ENST00000534254 KDM5BQ9UGL1 1544 aa23.32■■□□□ 1.32
CHID1-224ENST00000534254 EPRSP07814 1512 aaKnown RBP23.3■■□□□ 1.32
CHID1-224ENST00000534254 KDM4FA0A1W2PPD8 638 aa23.3■■□□□ 1.32
CHID1-224ENST00000534254 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
CHID1-224ENST00000534254 ABCA8O94911 1581 aa23.2■■□□□ 1.3
CHID1-224ENST00000534254 PRXQ9BXM0 1461 aa23.19■■□□□ 1.3
CHID1-224ENST00000534254 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
CHID1-224ENST00000534254 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
CHID1-224ENST00000534254 ARID3CA6NKF2 412 aa23.15■■□□□ 1.3
CHID1-224ENST00000534254 ADGRL1O94910 1474 aa23.13■■□□□ 1.29
CHID1-224ENST00000534254 P3H3Q8IVL6 736 aa23.13■■□□□ 1.29
CHID1-224ENST00000534254 CFAP43Q8NDM7 1665 aa23.13■■□□□ 1.29
CHID1-224ENST00000534254 TEX14Q8IWB6 1497 aa23.12■■□□□ 1.29
CHID1-224ENST00000534254 KCNH8Q96L42 1107 aa23.12■■□□□ 1.29
CHID1-224ENST00000534254 CD109Q6YHK3 1445 aa23.04■■□□□ 1.28
CHID1-224ENST00000534254 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
CHID1-224ENST00000534254 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
CHID1-224ENST00000534254 KIF21BO75037 1637 aa23■■□□□ 1.27
CHID1-224ENST00000534254 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
CHID1-224ENST00000534254 RAPGEF6Q8TEU7 1601 aa22.98■■□□□ 1.27
CHID1-224ENST00000534254 ATP10BO94823 1461 aa22.98■■□□□ 1.27
CHID1-224ENST00000534254 CSRNP3Q8WYN3 585 aa22.97■■□□□ 1.27
CHID1-224ENST00000534254 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
CHID1-224ENST00000534254 ABCA9Q8IUA7 1624 aa22.92■■□□□ 1.26
CHID1-224ENST00000534254 FHOD3Q2V2M9 1422 aa22.9■■□□□ 1.26
CHID1-224ENST00000534254 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
CHID1-224ENST00000534254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
CHID1-224ENST00000534254 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
CHID1-224ENST00000534254 NUP153P49790 1475 aaKnown RBP22.85■■□□□ 1.25
CHID1-224ENST00000534254 EHMT2Q96KQ7 1210 aa22.84■■□□□ 1.25
CHID1-224ENST00000534254 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
CHID1-224ENST00000534254 EEA1Q15075 1411 aa22.79■■□□□ 1.24
CHID1-224ENST00000534254 FRMPD1Q5SYB0 1578 aa22.79■■□□□ 1.24
CHID1-224ENST00000534254 RAPGEF3O95398 923 aa22.76■■□□□ 1.23
CHID1-224ENST00000534254 CDK13Q14004 1512 aaKnown RBP22.72■■□□□ 1.23
CHID1-224ENST00000534254 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
CHID1-224ENST00000534254 ADAMTSL3P82987 1691 aa22.71■■□□□ 1.23
CHID1-224ENST00000534254 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
CHID1-224ENST00000534254 ILDR1Q86SU0 546 aaPredicted RBP22.7■■□□□ 1.22
CHID1-224ENST00000534254 NEO1Q92859 1461 aa22.7■■□□□ 1.22
CHID1-224ENST00000534254 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
CHID1-224ENST00000534254 BCORL1Q5H9F3 1711 aa22.68■■□□□ 1.22
CHID1-224ENST00000534254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.67■■□□□ 1.223e-6■□□□□ 8.9
CHID1-224ENST00000534254 MADDQ8WXG6 1647 aa22.67■■□□□ 1.22
CHID1-224ENST00000534254 SIGLEC1Q9BZZ2 1709 aa22.64■■□□□ 1.21
CHID1-224ENST00000534254 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CHID1-224ENST00000534254 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
CHID1-224ENST00000534254 ARHGEF40Q8TER5 1519 aa22.62■■□□□ 1.21
CHID1-224ENST00000534254 RIMS1Q86UR5 1692 aaKnown RBP22.62■■□□□ 1.21
CHID1-224ENST00000534254 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
CHID1-224ENST00000534254 CFAP74Q9C0B2 1584 aa22.61■■□□□ 1.21
CHID1-224ENST00000534254 FANCAO15360 1455 aa22.6■■□□□ 1.21
CHID1-224ENST00000534254 PTPRMP28827 1452 aa22.6■■□□□ 1.21
CHID1-224ENST00000534254 ARID4BQ4LE39 1312 aaPredicted RBP22.59■■□□□ 1.21
CHID1-224ENST00000534254 AKNAQ7Z591 1439 aa22.59■■□□□ 1.21
CHID1-224ENST00000534254 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
CHID1-224ENST00000534254 ATP1B4Q9UN42 357 aaPredicted RBP22.58■■□□□ 1.21
CHID1-224ENST00000534254 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
CHID1-224ENST00000534254 MYO5CQ9NQX4 1742 aa22.56■■□□□ 1.2
CHID1-224ENST00000534254 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
CHID1-224ENST00000534254 KIF14Q15058 1648 aa22.55■■□□□ 1.2
CHID1-224ENST00000534254 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
CHID1-224ENST00000534254 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
CHID1-224ENST00000534254 YEATS2Q9ULM3 1422 aa22.53■■□□□ 1.2
CHID1-224ENST00000534254 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
CHID1-224ENST00000534254 ZMYM4Q5VZL5 1548 aa22.51■■□□□ 1.19
CHID1-224ENST00000534254 ZFYVE16Q7Z3T8 1539 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms