RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
CTSC-209ENST00000534131 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
CTSC-209ENST00000534131 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
CTSC-209ENST00000534131 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
CTSC-209ENST00000534131 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
CTSC-209ENST00000534131 KIF21BO75037 1637 aa19.34■□□□□ 0.69
CTSC-209ENST00000534131 ARHGEF11O15085 1522 aa19.32■□□□□ 0.68
CTSC-209ENST00000534131 CTTNBP2Q8WZ74 1663 aa19.29■□□□□ 0.68
CTSC-209ENST00000534131 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
CTSC-209ENST00000534131 NUP160Q12769 1436 aa19.27■□□□□ 0.68
CTSC-209ENST00000534131 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
CTSC-209ENST00000534131 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
CTSC-209ENST00000534131 UBTFP17480 764 aaKnown RBP19.22■□□□□ 0.67
CTSC-209ENST00000534131 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
CTSC-209ENST00000534131 CYB5RLQ6IPT4 315 aa19.21■□□□□ 0.67
CTSC-209ENST00000534131 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
CTSC-209ENST00000534131 IQGAP2Q13576 1575 aa19.19■□□□□ 0.66
CTSC-209ENST00000534131 JPH4Q96JJ6 628 aa19.14■□□□□ 0.65
CTSC-209ENST00000534131 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
CTSC-209ENST00000534131 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
CTSC-209ENST00000534131 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.64
CTSC-209ENST00000534131 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
CTSC-209ENST00000534131 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
CTSC-209ENST00000534131 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
CTSC-209ENST00000534131 LOC105371045A0A1W2PR82 267 aa19.02■□□□□ 0.64
CTSC-209ENST00000534131 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
CTSC-209ENST00000534131 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
CTSC-209ENST00000534131 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
CTSC-209ENST00000534131 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
CTSC-209ENST00000534131 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
CTSC-209ENST00000534131 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
CTSC-209ENST00000534131 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
CTSC-209ENST00000534131 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
CTSC-209ENST00000534131 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
CTSC-209ENST00000534131 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
CTSC-209ENST00000534131 PTPRGP23470 1445 aa18.9■□□□□ 0.62
CTSC-209ENST00000534131 CLIP1P30622 1438 aa18.89■□□□□ 0.61
CTSC-209ENST00000534131 CEP162Q5TB80 1403 aa18.87■□□□□ 0.61
CTSC-209ENST00000534131 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
CTSC-209ENST00000534131 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.61
CTSC-209ENST00000534131 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
CTSC-209ENST00000534131 UACAQ9BZF9 1416 aa18.77■□□□□ 0.6
CTSC-209ENST00000534131 RAPGEF6Q8TEU7 1601 aa18.76■□□□□ 0.59
CTSC-209ENST00000534131 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTSC-209ENST00000534131 ABCC2Q92887 1545 aa18.73■□□□□ 0.59
CTSC-209ENST00000534131 ABCA8O94911 1581 aa18.72■□□□□ 0.59
CTSC-209ENST00000534131 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
CTSC-209ENST00000534131 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
CTSC-209ENST00000534131 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
CTSC-209ENST00000534131 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
CTSC-209ENST00000534131 HECW1Q76N89 1606 aa18.7■□□□□ 0.58
CTSC-209ENST00000534131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
CTSC-209ENST00000534131 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
CTSC-209ENST00000534131 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
CTSC-209ENST00000534131 ZCCHC11Q5TAX3 1644 aaKnown RBP18.64■□□□□ 0.57
CTSC-209ENST00000534131 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
CTSC-209ENST00000534131 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
CTSC-209ENST00000534131 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.57
CTSC-209ENST00000534131 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
CTSC-209ENST00000534131 NUP153P49790 1475 aaKnown RBP18.59■□□□□ 0.57
CTSC-209ENST00000534131 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.57
CTSC-209ENST00000534131 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
CTSC-209ENST00000534131 APLP2Q06481 763 aa18.58■□□□□ 0.56
CTSC-209ENST00000534131 CDK11AQ9UQ88 783 aaPredicted RBP18.58■□□□□ 0.56
CTSC-209ENST00000534131 ATP10BO94823 1461 aa18.57■□□□□ 0.56
CTSC-209ENST00000534131 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
CTSC-209ENST00000534131 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
CTSC-209ENST00000534131 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
CTSC-209ENST00000534131 KIF13AQ9H1H9 1805 aa18.55■□□□□ 0.56
CTSC-209ENST00000534131 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
CTSC-209ENST00000534131 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
CTSC-209ENST00000534131 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
CTSC-209ENST00000534131 FAM69CQ0P6D2 419 aa18.49■□□□□ 0.55
CTSC-209ENST00000534131 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
CTSC-209ENST00000534131 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
CTSC-209ENST00000534131 ABCC10Q5T3U5 1492 aa18.46■□□□□ 0.55
CTSC-209ENST00000534131 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
CTSC-209ENST00000534131 KCNH8Q96L42 1107 aa18.45■□□□□ 0.54
CTSC-209ENST00000534131 TIAM1Q13009 1591 aa18.45■□□□□ 0.54
CTSC-209ENST00000534131 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
CTSC-209ENST00000534131 MSH5O43196 834 aa18.43■□□□□ 0.54
CTSC-209ENST00000534131 DIP2BQ9P265 1576 aa18.42■□□□□ 0.54
CTSC-209ENST00000534131 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
CTSC-209ENST00000534131 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.54
CTSC-209ENST00000534131 KIF14Q15058 1648 aa18.39■□□□□ 0.53
CTSC-209ENST00000534131 GLI2P10070 1586 aa18.38■□□□□ 0.53
CTSC-209ENST00000534131 TSPOAP1O95153 1857 aa18.38■□□□□ 0.53
CTSC-209ENST00000534131 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
CTSC-209ENST00000534131 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
CTSC-209ENST00000534131 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
CTSC-209ENST00000534131 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.53
CTSC-209ENST00000534131 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
CTSC-209ENST00000534131 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
CTSC-209ENST00000534131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTSC-209ENST00000534131 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CTSC-209ENST00000534131 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
CTSC-209ENST00000534131 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
CTSC-209ENST00000534131 TTC37Q6PGP7 1564 aa18.27■□□□□ 0.52
CTSC-209ENST00000534131 CCNB3Q8WWL7 1395 aa18.26■□□□□ 0.51
CTSC-209ENST00000534131 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms