RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 IGF1RP08069 1367 aa32.07■■■□□ 2.73
HIF3A-216ENST00000533789 JPH4Q96JJ6 628 aa31.99■■■□□ 2.71
HIF3A-216ENST00000533789 KIAA0586Q9BVV6 1533 aa31.98■■■□□ 2.71
HIF3A-216ENST00000533789 KIF13AQ9H1H9 1805 aa31.91■■■□□ 2.7
HIF3A-216ENST00000533789 CARMIL1Q5VZK9 1371 aa31.89■■■□□ 2.7
HIF3A-216ENST00000533789 ADCY10Q96PN6 1610 aa31.82■■■□□ 2.69
HIF3A-216ENST00000533789 IQGAP2Q13576 1575 aa31.81■■■□□ 2.68
HIF3A-216ENST00000533789 MAPKBP1O60336 1514 aa31.72■■■□□ 2.67
HIF3A-216ENST00000533789 RAPGEF2Q9Y4G8 1499 aa31.69■■■□□ 2.66
HIF3A-216ENST00000533789 CTTNBP2Q8WZ74 1663 aa31.69■■■□□ 2.66
HIF3A-216ENST00000533789 CARMIL2Q6F5E8 1435 aa31.64■■■□□ 2.66
HIF3A-216ENST00000533789 DIP2BQ9P265 1576 aa31.62■■■□□ 2.65
HIF3A-216ENST00000533789 ABCC10Q5T3U5 1492 aa31.59■■■□□ 2.65
HIF3A-216ENST00000533789 PTPRGP23470 1445 aa31.58■■■□□ 2.65
HIF3A-216ENST00000533789 NPM1P06748 294 aaKnown RBP eCLIP31.57■■■□□ 2.64
HIF3A-216ENST00000533789 UGGT2Q9NYU1 1516 aa31.57■■■□□ 2.64
HIF3A-216ENST00000533789 TNIKQ9UKE5 1360 aa31.56■■■□□ 2.64
HIF3A-216ENST00000533789 DISP1Q96F81 1524 aa31.56■■■□□ 2.64
HIF3A-216ENST00000533789 KIAA0556O60303 1618 aa31.53■■■□□ 2.64
HIF3A-216ENST00000533789 TSPOAP1O95153 1857 aa31.48■■■□□ 2.63
HIF3A-216ENST00000533789 ABCC2Q92887 1545 aa31.47■■■□□ 2.63
HIF3A-216ENST00000533789 UHRF1BP1LA0JNW5 1464 aa31.44■■■□□ 2.62
HIF3A-216ENST00000533789 PRXQ9BXM0 1461 aa31.42■■■□□ 2.62
HIF3A-216ENST00000533789 FAM69CQ0P6D2 419 aa31.42■■■□□ 2.62
HIF3A-216ENST00000533789 TTBK1Q5TCY1 1321 aaPredicted RBP31.41■■■□□ 2.62
HIF3A-216ENST00000533789 UACAQ9BZF9 1416 aa31.39■■■□□ 2.62
HIF3A-216ENST00000533789 ZCCHC11Q5TAX3 1644 aaKnown RBP31.35■■■□□ 2.61
HIF3A-216ENST00000533789 GOLGA3Q08378 1498 aa31.31■■■□□ 2.6
HIF3A-216ENST00000533789 KDM5BQ9UGL1 1544 aa31.3■■■□□ 2.6
HIF3A-216ENST00000533789 PLB1Q6P1J6 1458 aa31.3■■■□□ 2.6
HIF3A-216ENST00000533789 ASXL2Q76L83 1435 aa31.3■■■□□ 2.6
HIF3A-216ENST00000533789 GLI2P10070 1586 aa31.29■■■□□ 2.6
HIF3A-216ENST00000533789 KDM6BO15054 1643 aa31.28■■■□□ 2.6
HIF3A-216ENST00000533789 PPRC1Q5VV67 1664 aaKnown RBP31.28■■■□□ 2.6
HIF3A-216ENST00000533789 ABCA8O94911 1581 aa31.19■■■□□ 2.58
HIF3A-216ENST00000533789 MAP3K4Q9Y6R4 1608 aa31.19■■■□□ 2.58
HIF3A-216ENST00000533789 EEA1Q15075 1411 aa31.15■■■□□ 2.58
HIF3A-216ENST00000533789 EPRSP07814 1512 aaKnown RBP31.14■■■□□ 2.57
HIF3A-216ENST00000533789 SAMD9Q5K651 1589 aa31.12■■■□□ 2.57
HIF3A-216ENST00000533789 CSRNP3Q8WYN3 585 aa31.11■■■□□ 2.57
HIF3A-216ENST00000533789 WDR7Q9Y4E6 1490 aa31.08■■■□□ 2.57
HIF3A-216ENST00000533789 AEBP2Q6ZN18 517 aaPredicted RBP31.07■■■□□ 2.56
HIF3A-216ENST00000533789 CFAP43Q8NDM7 1665 aa31.03■■■□□ 2.56
HIF3A-216ENST00000533789 KIF21BO75037 1637 aa31.02■■■□□ 2.56
HIF3A-216ENST00000533789 TEX14Q8IWB6 1497 aa30.98■■■□□ 2.55
HIF3A-216ENST00000533789 RAPGEF6Q8TEU7 1601 aa30.95■■■□□ 2.54
HIF3A-216ENST00000533789 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
HIF3A-216ENST00000533789 FAM9AQ8IZU1 332 aaPredicted RBP30.86■■■□□ 2.53
HIF3A-216ENST00000533789 MAGI3Q5TCQ9 1506 aa30.83■■■□□ 2.53
HIF3A-216ENST00000533789 ATP10BO94823 1461 aa30.82■■■□□ 2.53
HIF3A-216ENST00000533789 COL17A1Q9UMD9 1497 aaPredicted RBP30.82■■■□□ 2.53
HIF3A-216ENST00000533789 EFCAB5A4FU69 1503 aa30.82■■■□□ 2.52
HIF3A-216ENST00000533789 CD109Q6YHK3 1445 aa30.79■■■□□ 2.52
HIF3A-216ENST00000533789 ABCA9Q8IUA7 1624 aa30.78■■■□□ 2.52
HIF3A-216ENST00000533789 FHOD3Q2V2M9 1422 aa30.77■■■□□ 2.52
HIF3A-216ENST00000533789 KCNH8Q96L42 1107 aa30.74■■■□□ 2.51
HIF3A-216ENST00000533789 NUP153P49790 1475 aaKnown RBP30.74■■■□□ 2.51
HIF3A-216ENST00000533789 CHIC1Q5VXU3 224 aa30.72■■■□□ 2.51
HIF3A-216ENST00000533789 ARID3CA6NKF2 412 aa30.71■■■□□ 2.51
HIF3A-216ENST00000533789 RANGAP1P46060 587 aaPredicted RBP30.68■■■□□ 2.5
HIF3A-216ENST00000533789 KDM4FA0A1W2PPD8 638 aa30.65■■■□□ 2.5
HIF3A-216ENST00000533789 ADGRL1O94910 1474 aa30.6■■■□□ 2.49
HIF3A-216ENST00000533789 ARAP3Q8WWN8 1544 aa30.59■■■□□ 2.49
HIF3A-216ENST00000533789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.54■■■□□ 2.48
HIF3A-216ENST00000533789 HNRNPUL2Q1KMD3 747 aaKnown RBP30.54■■■□□ 2.48
HIF3A-216ENST00000533789 HECW1Q76N89 1606 aa30.51■■■□□ 2.48
HIF3A-216ENST00000533789 NEO1Q92859 1461 aa30.5■■■□□ 2.47
HIF3A-216ENST00000533789 UBTFP17480 764 aaKnown RBP30.5■■■□□ 2.47
HIF3A-216ENST00000533789 PHLDB1Q86UU1 1377 aa30.49■■■□□ 2.47
HIF3A-216ENST00000533789 ARHGAP35Q9NRY4 1499 aa30.49■■■□□ 2.47
HIF3A-216ENST00000533789 CDK13Q14004 1512 aaKnown RBP30.47■■■□□ 2.47
HIF3A-216ENST00000533789 CFAP74Q9C0B2 1584 aa30.47■■■□□ 2.47
HIF3A-216ENST00000533789 EHMT2Q96KQ7 1210 aa30.47■■■□□ 2.47
HIF3A-216ENST00000533789 TTC37Q6PGP7 1564 aa30.46■■■□□ 2.47
HIF3A-216ENST00000533789 FMN1Q68DA7 1419 aa30.45■■■□□ 2.46
HIF3A-216ENST00000533789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.44■■■□□ 2.46
HIF3A-216ENST00000533789 FRMPD1Q5SYB0 1578 aa30.44■■■□□ 2.46
HIF3A-216ENST00000533789 LRRIQ1Q96JM4 1722 aa30.44■■■□□ 2.46
HIF3A-216ENST00000533789 PLEKHD1A6NEE1 506 aa30.41■■■□□ 2.46
HIF3A-216ENST00000533789 RICTORQ6R327 1708 aa30.4■■■□□ 2.46
HIF3A-216ENST00000533789 MYO5CQ9NQX4 1742 aa30.36■■■□□ 2.45
HIF3A-216ENST00000533789 FANCAO15360 1455 aa30.31■■■□□ 2.44
HIF3A-216ENST00000533789 ARHGEF40Q8TER5 1519 aa30.27■■■□□ 2.44
HIF3A-216ENST00000533789 KIF14Q15058 1648 aa30.27■■■□□ 2.44
HIF3A-216ENST00000533789 PCF11O94913 1555 aaKnown RBP30.26■■■□□ 2.43
HIF3A-216ENST00000533789 RAPGEF3O95398 923 aa30.26■■■□□ 2.43
HIF3A-216ENST00000533789 AKNAQ7Z591 1439 aa30.26■■■□□ 2.43
HIF3A-216ENST00000533789 ADAMTSL3P82987 1691 aa30.24■■■□□ 2.43
HIF3A-216ENST00000533789 DENND4BO75064 1496 aaPredicted RBP30.24■■■□□ 2.43
HIF3A-216ENST00000533789 ZMYM4Q5VZL5 1548 aa30.22■■■□□ 2.43
HIF3A-216ENST00000533789 BCORL1Q5H9F3 1711 aa30.22■■■□□ 2.43
HIF3A-216ENST00000533789 ATP1B4Q9UN42 357 aaPredicted RBP30.2■■■□□ 2.43
HIF3A-216ENST00000533789 PLCH2O75038 1416 aa30.17■■■□□ 2.42
HIF3A-216ENST00000533789 HECW2Q9P2P5 1572 aa30.16■■■□□ 2.42
HIF3A-216ENST00000533789 TROQ12816 1431 aaPredicted RBP30.16■■■□□ 2.42
HIF3A-216ENST00000533789 CCDC18Q5T9S5 1454 aa30.15■■■□□ 2.42
HIF3A-216ENST00000533789 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
HIF3A-216ENST00000533789 CASKIN1Q8WXD9 1431 aa30.14■■■□□ 2.42
HIF3A-216ENST00000533789 CDC42BPBQ9Y5S2 1711 aa30.13■■■□□ 2.41
HIF3A-216ENST00000533789 CLIP1P30622 1438 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms