RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATM-222ENST00000533733 RAD54L2Q9Y4B4 1467 aa17.82■□□□□ 0.44
ATM-222ENST00000533733 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
ATM-222ENST00000533733 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
ATM-222ENST00000533733 KANK4Q5T7N3 995 aaPredicted RBP17.78■□□□□ 0.44
ATM-222ENST00000533733 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
ATM-222ENST00000533733 LRRC9Q6ZRR7 1453 aa17.77■□□□□ 0.43
ATM-222ENST00000533733 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
ATM-222ENST00000533733 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
ATM-222ENST00000533733 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
ATM-222ENST00000533733 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
ATM-222ENST00000533733 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
ATM-222ENST00000533733 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
ATM-222ENST00000533733 SAMD9Q5K651 1589 aa17.71■□□□□ 0.43
ATM-222ENST00000533733 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.42
ATM-222ENST00000533733 DHX57Q6P158 1386 aaKnown RBP17.7■□□□□ 0.42
ATM-222ENST00000533733 THOC2Q8NI27 1593 aaKnown RBP17.69■□□□□ 0.42
ATM-222ENST00000533733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
ATM-222ENST00000533733 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
ATM-222ENST00000533733 FHOD3Q2V2M9 1422 aa17.62■□□□□ 0.41
ATM-222ENST00000533733 MRC2Q9UBG0 1479 aa17.61■□□□□ 0.41
ATM-222ENST00000533733 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
ATM-222ENST00000533733 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
ATM-222ENST00000533733 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
ATM-222ENST00000533733 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
ATM-222ENST00000533733 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
ATM-222ENST00000533733 CENPBP07199 599 aaPredicted RBP17.55■□□□□ 0.4
ATM-222ENST00000533733 GRIN2BQ13224 1484 aa17.53■□□□□ 0.4
ATM-222ENST00000533733 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
ATM-222ENST00000533733 SUPT6HQ7KZ85 1726 aaKnown RBP17.52■□□□□ 0.4
ATM-222ENST00000533733 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
ATM-222ENST00000533733 RAB3GAP2Q9H2M9 1393 aa17.52■□□□□ 0.39
ATM-222ENST00000533733 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
ATM-222ENST00000533733 WDR62O43379 1518 aa17.51■□□□□ 0.39
ATM-222ENST00000533733 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
ATM-222ENST00000533733 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
ATM-222ENST00000533733 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
ATM-222ENST00000533733 P3H3Q8IVL6 736 aa17.48■□□□□ 0.39
ATM-222ENST00000533733 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
ATM-222ENST00000533733 FGD6Q6ZV73 1430 aa17.47■□□□□ 0.39
ATM-222ENST00000533733 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
ATM-222ENST00000533733 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
ATM-222ENST00000533733 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
ATM-222ENST00000533733 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
ATM-222ENST00000533733 ATP1B4Q9UN42 357 aaPredicted RBP17.42■□□□□ 0.38
ATM-222ENST00000533733 ARHGEF11O15085 1522 aa17.41■□□□□ 0.38
ATM-222ENST00000533733 FAM50AQ14320 339 aaKnown RBP17.41■□□□□ 0.38
ATM-222ENST00000533733 MYOM3Q5VTT5 1437 aa17.41■□□□□ 0.38
ATM-222ENST00000533733 ITGAEP38570 1179 aa17.4■□□□□ 0.38
ATM-222ENST00000533733 NCOA2Q15596 1464 aa17.4■□□□□ 0.38
ATM-222ENST00000533733 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
ATM-222ENST00000533733 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
ATM-222ENST00000533733 HFM1A2PYH4 1435 aa17.35■□□□□ 0.37
ATM-222ENST00000533733 KIAA0586Q9BVV6 1533 aa17.35■□□□□ 0.37
ATM-222ENST00000533733 TCOF1Q13428 1488 aaKnown RBP17.34■□□□□ 0.37
ATM-222ENST00000533733 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.37
ATM-222ENST00000533733 EPRSP07814 1512 aaKnown RBP17.33■□□□□ 0.36
ATM-222ENST00000533733 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
ATM-222ENST00000533733 KIAA0556O60303 1618 aa17.32■□□□□ 0.36
ATM-222ENST00000533733 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
ATM-222ENST00000533733 AKNAQ7Z591 1439 aa17.31■□□□□ 0.36
ATM-222ENST00000533733 NEUROD1Q13562 356 aa17.31■□□□□ 0.36
ATM-222ENST00000533733 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
ATM-222ENST00000533733 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
ATM-222ENST00000533733 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
ATM-222ENST00000533733 MIER1Q8N108 512 aa17.28■□□□□ 0.36
ATM-222ENST00000533733 MAGI3Q5TCQ9 1506 aa17.27■□□□□ 0.36
ATM-222ENST00000533733 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.36
ATM-222ENST00000533733 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
ATM-222ENST00000533733 RAPGEF6Q8TEU7 1601 aa17.25■□□□□ 0.35
ATM-222ENST00000533733 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
ATM-222ENST00000533733 NAIPQ13075 1403 aa17.23■□□□□ 0.35
ATM-222ENST00000533733 DISP1Q96F81 1524 aa17.23■□□□□ 0.35
ATM-222ENST00000533733 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
ATM-222ENST00000533733 PTPRKQ15262 1439 aa17.2■□□□□ 0.34
ATM-222ENST00000533733 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
ATM-222ENST00000533733 CDK13Q14004 1512 aaKnown RBP17.18■□□□□ 0.34
ATM-222ENST00000533733 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
ATM-222ENST00000533733 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
ATM-222ENST00000533733 ADCY10Q96PN6 1610 aa17.15■□□□□ 0.34
ATM-222ENST00000533733 DNMT1P26358 1616 aaKnown RBP17.15■□□□□ 0.34
ATM-222ENST00000533733 CEP170Q5SW79 1584 aa17.14■□□□□ 0.33
ATM-222ENST00000533733 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
ATM-222ENST00000533733 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
ATM-222ENST00000533733 NUP160Q12769 1436 aa17.14■□□□□ 0.33
ATM-222ENST00000533733 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
ATM-222ENST00000533733 ROCK1Q13464 1354 aa17.13■□□□□ 0.33
ATM-222ENST00000533733 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
ATM-222ENST00000533733 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
ATM-222ENST00000533733 SIN3AQ96ST3 1273 aa17.11■□□□□ 0.33
ATM-222ENST00000533733 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.33
ATM-222ENST00000533733 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
ATM-222ENST00000533733 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
ATM-222ENST00000533733 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
ATM-222ENST00000533733 DAPK1P53355 1430 aa17.06■□□□□ 0.32
ATM-222ENST00000533733 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
ATM-222ENST00000533733 ABCA8O94911 1581 aa17.01■□□□□ 0.31
ATM-222ENST00000533733 ABCC5O15440 1437 aa16.99■□□□□ 0.31
ATM-222ENST00000533733 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
ATM-222ENST00000533733 KDM6BO15054 1643 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms