RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 IGF1RP08069 1367 aa19.72■□□□□ 0.75
CLCF1-202ENST00000533438 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
CLCF1-202ENST00000533438 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
CLCF1-202ENST00000533438 KIAA0586Q9BVV6 1533 aa19.62■□□□□ 0.73
CLCF1-202ENST00000533438 CARMIL1Q5VZK9 1371 aa19.58■□□□□ 0.73
CLCF1-202ENST00000533438 KIF13AQ9H1H9 1805 aa19.5■□□□□ 0.71
CLCF1-202ENST00000533438 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
CLCF1-202ENST00000533438 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
CLCF1-202ENST00000533438 IQGAP2Q13576 1575 aa19.48■□□□□ 0.71
CLCF1-202ENST00000533438 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 MAPKBP1O60336 1514 aa19.44■□□□□ 0.7
CLCF1-202ENST00000533438 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
CLCF1-202ENST00000533438 CARMIL2Q6F5E8 1435 aa19.4■□□□□ 0.7
CLCF1-202ENST00000533438 PTPRGP23470 1445 aa19.38■□□□□ 0.69
CLCF1-202ENST00000533438 DISP1Q96F81 1524 aa19.37■□□□□ 0.69
CLCF1-202ENST00000533438 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
CLCF1-202ENST00000533438 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
CLCF1-202ENST00000533438 UGGT2Q9NYU1 1516 aa19.36■□□□□ 0.69
CLCF1-202ENST00000533438 CTTNBP2Q8WZ74 1663 aa19.35■□□□□ 0.69
CLCF1-202ENST00000533438 KIAA0556O60303 1618 aa19.31■□□□□ 0.68
CLCF1-202ENST00000533438 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
CLCF1-202ENST00000533438 UHRF1BP1LA0JNW5 1464 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 PRXQ9BXM0 1461 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
CLCF1-202ENST00000533438 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
CLCF1-202ENST00000533438 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
CLCF1-202ENST00000533438 TSPOAP1O95153 1857 aa19.21■□□□□ 0.67
CLCF1-202ENST00000533438 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
CLCF1-202ENST00000533438 ASXL2Q76L83 1435 aa19.2■□□□□ 0.66
CLCF1-202ENST00000533438 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
CLCF1-202ENST00000533438 KDM6BO15054 1643 aa19.18■□□□□ 0.66
CLCF1-202ENST00000533438 ZCCHC11Q5TAX3 1644 aaKnown RBP19.18■□□□□ 0.66
CLCF1-202ENST00000533438 GLI2P10070 1586 aa19.18■□□□□ 0.66
CLCF1-202ENST00000533438 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
CLCF1-202ENST00000533438 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.66
CLCF1-202ENST00000533438 ABCA8O94911 1581 aa19.12■□□□□ 0.65
CLCF1-202ENST00000533438 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
CLCF1-202ENST00000533438 EEA1Q15075 1411 aa19.11■□□□□ 0.65
CLCF1-202ENST00000533438 EPRSP07814 1512 aaKnown RBP19.1■□□□□ 0.65
CLCF1-202ENST00000533438 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
CLCF1-202ENST00000533438 SAMD9Q5K651 1589 aa19.06■□□□□ 0.64
CLCF1-202ENST00000533438 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
CLCF1-202ENST00000533438 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
CLCF1-202ENST00000533438 KIF21BO75037 1637 aa18.99■□□□□ 0.63
CLCF1-202ENST00000533438 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
CLCF1-202ENST00000533438 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
CLCF1-202ENST00000533438 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
CLCF1-202ENST00000533438 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
CLCF1-202ENST00000533438 ADGRL1O94910 1474 aa18.94■□□□□ 0.62
CLCF1-202ENST00000533438 ATP10BO94823 1461 aa18.93■□□□□ 0.62
CLCF1-202ENST00000533438 ILDR1Q86SU0 546 aaPredicted RBP18.93■□□□□ 0.62
CLCF1-202ENST00000533438 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
CLCF1-202ENST00000533438 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
CLCF1-202ENST00000533438 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
CLCF1-202ENST00000533438 CD109Q6YHK3 1445 aa18.89■□□□□ 0.61
CLCF1-202ENST00000533438 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
CLCF1-202ENST00000533438 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
CLCF1-202ENST00000533438 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
CLCF1-202ENST00000533438 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
CLCF1-202ENST00000533438 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
CLCF1-202ENST00000533438 ARID3CA6NKF2 412 aa18.84■□□□□ 0.61
CLCF1-202ENST00000533438 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
CLCF1-202ENST00000533438 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
CLCF1-202ENST00000533438 HECW2Q9P2P5 1572 aa18.74■□□□□ 0.59
CLCF1-202ENST00000533438 PHLDB1Q86UU1 1377 aa18.74■□□□□ 0.59
CLCF1-202ENST00000533438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
CLCF1-202ENST00000533438 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
CLCF1-202ENST00000533438 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
CLCF1-202ENST00000533438 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
CLCF1-202ENST00000533438 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
CLCF1-202ENST00000533438 NEO1Q92859 1461 aa18.7■□□□□ 0.58
CLCF1-202ENST00000533438 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
CLCF1-202ENST00000533438 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
CLCF1-202ENST00000533438 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
CLCF1-202ENST00000533438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
CLCF1-202ENST00000533438 HECW1Q76N89 1606 aa18.67■□□□□ 0.58
CLCF1-202ENST00000533438 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.58
CLCF1-202ENST00000533438 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.58
CLCF1-202ENST00000533438 CFAP74Q9C0B2 1584 aa18.62■□□□□ 0.57
CLCF1-202ENST00000533438 LRRIQ1Q96JM4 1722 aa18.61■□□□□ 0.57
CLCF1-202ENST00000533438 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
CLCF1-202ENST00000533438 FANCAO15360 1455 aa18.58■□□□□ 0.57
CLCF1-202ENST00000533438 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
CLCF1-202ENST00000533438 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
CLCF1-202ENST00000533438 FBXO41Q8TF61 875 aa18.56■□□□□ 0.56
CLCF1-202ENST00000533438 PTPRMP28827 1452 aa18.55■□□□□ 0.56
CLCF1-202ENST00000533438 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
CLCF1-202ENST00000533438 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
CLCF1-202ENST00000533438 PLCH2O75038 1416 aa18.53■□□□□ 0.56
CLCF1-202ENST00000533438 MYO5CQ9NQX4 1742 aa18.53■□□□□ 0.56
CLCF1-202ENST00000533438 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
CLCF1-202ENST00000533438 KIF14Q15058 1648 aa18.52■□□□□ 0.56
CLCF1-202ENST00000533438 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
CLCF1-202ENST00000533438 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
CLCF1-202ENST00000533438 ZMYM4Q5VZL5 1548 aa18.51■□□□□ 0.55
CLCF1-202ENST00000533438 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
CLCF1-202ENST00000533438 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
CLCF1-202ENST00000533438 CASKIN1Q8WXD9 1431 aa18.49■□□□□ 0.55
CLCF1-202ENST00000533438 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms