RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CYB5RLQ6IPT4 315 aa34.55■■■■□ 3.12
CCS-208ENST00000533244 RAPGEF2Q9Y4G8 1499 aa34.54■■■■□ 3.12
CCS-208ENST00000533244 CHIC1Q5VXU3 224 aa34.51■■■■□ 3.12
CCS-208ENST00000533244 JPH4Q96JJ6 628 aa34.49■■■■□ 3.11
CCS-208ENST00000533244 PRXQ9BXM0 1461 aa34.46■■■■□ 3.11
CCS-208ENST00000533244 PRG4Q92954 1404 aaPredicted RBP34.45■■■■□ 3.11
CCS-208ENST00000533244 EEA1Q15075 1411 aa34.42■■■■□ 3.1
CCS-208ENST00000533244 IQGAP2Q13576 1575 aa34.36■■■■□ 3.09
CCS-208ENST00000533244 CSRNP3Q8WYN3 585 aa34.33■■■■□ 3.09
CCS-208ENST00000533244 CTTNBP2Q8WZ74 1663 aa34.24■■■■□ 3.07
CCS-208ENST00000533244 UGGT2Q9NYU1 1516 aa34.2■■■■□ 3.07
CCS-208ENST00000533244 CARMIL2Q6F5E8 1435 aa34.14■■■■□ 3.06
CCS-208ENST00000533244 DISP1Q96F81 1524 aa34.14■■■■□ 3.06
CCS-208ENST00000533244 FAM9AQ8IZU1 332 aaPredicted RBP34.12■■■■□ 3.05
CCS-208ENST00000533244 KIF21BO75037 1637 aa34.09■■■■□ 3.05
CCS-208ENST00000533244 TNIKQ9UKE5 1360 aa34.06■■■■□ 3.04
CCS-208ENST00000533244 KIAA0556O60303 1618 aa34.05■■■■□ 3.04
CCS-208ENST00000533244 PTPRGP23470 1445 aa34.02■■■■□ 3.04
CCS-208ENST00000533244 ADCY10Q96PN6 1610 aa33.98■■■■□ 3.03
CCS-208ENST00000533244 GOLGA3Q08378 1498 aa33.96■■■■□ 3.03
CCS-208ENST00000533244 UHRF1BP1LA0JNW5 1464 aa33.84■■■■□ 3.01
CCS-208ENST00000533244 SAMD9Q5K651 1589 aa33.83■■■■□ 3.01
CCS-208ENST00000533244 UACAQ9BZF9 1416 aa33.82■■■■□ 3.01
CCS-208ENST00000533244 TRHP20396 242 aaPredicted RBP33.82■■■■□ 3
CCS-208ENST00000533244 TTBK1Q5TCY1 1321 aaPredicted RBP33.82■■■■□ 3
CCS-208ENST00000533244 MAPKBP1O60336 1514 aa33.79■■■■□ 3
CCS-208ENST00000533244 ABCC2Q92887 1545 aa33.79■■■■□ 3
CCS-208ENST00000533244 NPM1P06748 294 aaKnown RBP eCLIP33.75■■■□□ 2.99
CCS-208ENST00000533244 ABCA8O94911 1581 aa33.69■■■□□ 2.98
CCS-208ENST00000533244 PLB1Q6P1J6 1458 aa33.69■■■□□ 2.98
CCS-208ENST00000533244 KDM5BQ9UGL1 1544 aa33.67■■■□□ 2.98
CCS-208ENST00000533244 EFCAB5A4FU69 1503 aa33.66■■■□□ 2.98
CCS-208ENST00000533244 UBTFP17480 764 aaKnown RBP33.65■■■□□ 2.98
CCS-208ENST00000533244 P3H3Q8IVL6 736 aa33.63■■■□□ 2.97
CCS-208ENST00000533244 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
CCS-208ENST00000533244 EHMT2Q96KQ7 1210 aa33.62■■■□□ 2.97
CCS-208ENST00000533244 ABCC10Q5T3U5 1492 aa33.62■■■□□ 2.97
CCS-208ENST00000533244 DIP2BQ9P265 1576 aa33.58■■■□□ 2.97
CCS-208ENST00000533244 ZCCHC11Q5TAX3 1644 aaKnown RBP33.58■■■□□ 2.97
CCS-208ENST00000533244 RANGAP1P46060 587 aaPredicted RBP33.56■■■□□ 2.96
CCS-208ENST00000533244 FHOD3Q2V2M9 1422 aa33.56■■■□□ 2.96
CCS-208ENST00000533244 ASXL2Q76L83 1435 aa33.54■■■□□ 2.96
CCS-208ENST00000533244 RAPGEF6Q8TEU7 1601 aa33.48■■■□□ 2.95
CCS-208ENST00000533244 ARHGAP35Q9NRY4 1499 aa33.47■■■□□ 2.95
CCS-208ENST00000533244 FAM69CQ0P6D2 419 aa33.45■■■□□ 2.95
CCS-208ENST00000533244 GLI2P10070 1586 aa33.4■■■□□ 2.94
CCS-208ENST00000533244 ATP10BO94823 1461 aa33.38■■■□□ 2.93
CCS-208ENST00000533244 NUP153P49790 1475 aaKnown RBP33.37■■■□□ 2.93
CCS-208ENST00000533244 WDR7Q9Y4E6 1490 aa33.37■■■□□ 2.93
CCS-208ENST00000533244 EPRSP07814 1512 aaKnown RBP33.36■■■□□ 2.93
CCS-208ENST00000533244 FMN1Q68DA7 1419 aa33.3■■■□□ 2.92
CCS-208ENST00000533244 ARID3CA6NKF2 412 aa33.25■■■□□ 2.91
CCS-208ENST00000533244 MAP3K4Q9Y6R4 1608 aa33.23■■■□□ 2.91
CCS-208ENST00000533244 CLIP1P30622 1438 aa33.22■■■□□ 2.91
CCS-208ENST00000533244 TSPOAP1O95153 1857 aa33.21■■■□□ 2.91
CCS-208ENST00000533244 PPRC1Q5VV67 1664 aaKnown RBP33.2■■■□□ 2.91
CCS-208ENST00000533244 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
CCS-208ENST00000533244 CFAP43Q8NDM7 1665 aa33.13■■■□□ 2.89
CCS-208ENST00000533244 KCNH8Q96L42 1107 aa33.11■■■□□ 2.89
CCS-208ENST00000533244 CDK13Q14004 1512 aaKnown RBP33.1■■■□□ 2.89
CCS-208ENST00000533244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.09■■■□□ 2.89
CCS-208ENST00000533244 HNRNPUL2Q1KMD3 747 aaKnown RBP33.09■■■□□ 2.89
CCS-208ENST00000533244 CEP162Q5TB80 1403 aa33.07■■■□□ 2.88
CCS-208ENST00000533244 PCF11O94913 1555 aaKnown RBP33.06■■■□□ 2.88
CCS-208ENST00000533244 CASKIN1Q8WXD9 1431 aa33.06■■■□□ 2.88
CCS-208ENST00000533244 ABCA9Q8IUA7 1624 aa33.06■■■□□ 2.88
CCS-208ENST00000533244 MAGI3Q5TCQ9 1506 aa33.04■■■□□ 2.88
CCS-208ENST00000533244 TEX14Q8IWB6 1497 aa33.04■■■□□ 2.88
CCS-208ENST00000533244 CD109Q6YHK3 1445 aa33.04■■■□□ 2.88
CCS-208ENST00000533244 LOC105371045A0A1W2PR82 267 aa33.03■■■□□ 2.88
CCS-208ENST00000533244 LRRIQ1Q96JM4 1722 aa33.02■■■□□ 2.88
CCS-208ENST00000533244 PLEKHD1A6NEE1 506 aa33.02■■■□□ 2.88
CCS-208ENST00000533244 KDM6BO15054 1643 aa33.01■■■□□ 2.87
CCS-208ENST00000533244 FYCO1Q9BQS8 1478 aa32.99■■■□□ 2.87
CCS-208ENST00000533244 ATP1B4Q9UN42 357 aaPredicted RBP32.97■■■□□ 2.87
CCS-208ENST00000533244 CCDC18Q5T9S5 1454 aa32.93■■■□□ 2.86
CCS-208ENST00000533244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.88■■■□□ 2.85
CCS-208ENST00000533244 COL17A1Q9UMD9 1497 aaPredicted RBP32.88■■■□□ 2.85
CCS-208ENST00000533244 CDK11AQ9UQ88 783 aaPredicted RBP32.87■■■□□ 2.85
CCS-208ENST00000533244 TTC37Q6PGP7 1564 aa32.85■■■□□ 2.85
CCS-208ENST00000533244 TROQ12816 1431 aaPredicted RBP32.85■■■□□ 2.85
CCS-208ENST00000533244 KIF14Q15058 1648 aa32.78■■■□□ 2.84
CCS-208ENST00000533244 NEO1Q92859 1461 aa32.77■■■□□ 2.84
CCS-208ENST00000533244 PHLDB1Q86UU1 1377 aa32.76■■■□□ 2.84
CCS-208ENST00000533244 ARAP3Q8WWN8 1544 aa32.75■■■□□ 2.83
CCS-208ENST00000533244 VPS8Q8N3P4 1428 aa32.69■■■□□ 2.82
CCS-208ENST00000533244 PLCH2O75038 1416 aa32.69■■■□□ 2.82
CCS-208ENST00000533244 CFAP74Q9C0B2 1584 aa32.67■■■□□ 2.82
CCS-208ENST00000533244 FANCAO15360 1455 aa32.67■■■□□ 2.82
CCS-208ENST00000533244 MYO5CQ9NQX4 1742 aa32.66■■■□□ 2.82
CCS-208ENST00000533244 AKNAQ7Z591 1439 aa32.61■■■□□ 2.81
CCS-208ENST00000533244 FRMPD1Q5SYB0 1578 aa32.56■■■□□ 2.8
CCS-208ENST00000533244 PREX2Q70Z35 1606 aa32.54■■■□□ 2.8
CCS-208ENST00000533244 EHBP1L1Q8N3D4 1523 aa32.53■■■□□ 2.8
CCS-208ENST00000533244 MTUS2Q5JR59 1369 aa32.53■■■□□ 2.8
CCS-208ENST00000533244 CDC42BPBQ9Y5S2 1711 aa32.52■■■□□ 2.8
CCS-208ENST00000533244 TIAM1Q13009 1591 aa32.52■■■□□ 2.8
CCS-208ENST00000533244 DENND4BO75064 1496 aaPredicted RBP32.51■■■□□ 2.79
CCS-208ENST00000533244 EFCAB2Q5VUJ9 269 aa32.51■■■□□ 2.79
CCS-208ENST00000533244 RICTORQ6R327 1708 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms