RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
TRAPPC4-211ENST00000533012 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-211ENST00000533012 KIF21BO75037 1637 aa18.34■□□□□ 0.53
TRAPPC4-211ENST00000533012 GOLGA3Q08378 1498 aa18.33■□□□□ 0.52
TRAPPC4-211ENST00000533012 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC4-211ENST00000533012 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
TRAPPC4-211ENST00000533012 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
TRAPPC4-211ENST00000533012 SHROOM2Q13796 1616 aa18.25■□□□□ 0.51
TRAPPC4-211ENST00000533012 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
TRAPPC4-211ENST00000533012 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC4-211ENST00000533012 CYB5RLQ6IPT4 315 aa18.24■□□□□ 0.51
TRAPPC4-211ENST00000533012 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
TRAPPC4-211ENST00000533012 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
TRAPPC4-211ENST00000533012 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
TRAPPC4-211ENST00000533012 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.51
TRAPPC4-211ENST00000533012 UGGT2Q9NYU1 1516 aa18.21■□□□□ 0.51
TRAPPC4-211ENST00000533012 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
TRAPPC4-211ENST00000533012 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
TRAPPC4-211ENST00000533012 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
TRAPPC4-211ENST00000533012 TTBK1Q5TCY1 1321 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-211ENST00000533012 P3H3Q8IVL6 736 aa18.16■□□□□ 0.5
TRAPPC4-211ENST00000533012 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
TRAPPC4-211ENST00000533012 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
TRAPPC4-211ENST00000533012 PTPRGP23470 1445 aa18.15■□□□□ 0.5
TRAPPC4-211ENST00000533012 KIAA0556O60303 1618 aa18.09■□□□□ 0.49
TRAPPC4-211ENST00000533012 EFCAB5A4FU69 1503 aa18.04■□□□□ 0.48
TRAPPC4-211ENST00000533012 SAMD9Q5K651 1589 aa18.04■□□□□ 0.48
TRAPPC4-211ENST00000533012 NPM1P06748 294 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRAPPC4-211ENST00000533012 CLIP1P30622 1438 aa18.02■□□□□ 0.48
TRAPPC4-211ENST00000533012 FHOD3Q2V2M9 1422 aa18.02■□□□□ 0.48
TRAPPC4-211ENST00000533012 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
TRAPPC4-211ENST00000533012 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
TRAPPC4-211ENST00000533012 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
TRAPPC4-211ENST00000533012 PLB1Q6P1J6 1458 aa17.95■□□□□ 0.46
TRAPPC4-211ENST00000533012 FMN1Q68DA7 1419 aa17.94■□□□□ 0.46
TRAPPC4-211ENST00000533012 UHRF1BP1LA0JNW5 1464 aa17.94■□□□□ 0.46
TRAPPC4-211ENST00000533012 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC4-211ENST00000533012 ABCC2Q92887 1545 aa17.9■□□□□ 0.46
TRAPPC4-211ENST00000533012 ABCA8O94911 1581 aa17.89■□□□□ 0.45
TRAPPC4-211ENST00000533012 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.45
TRAPPC4-211ENST00000533012 ARID3CA6NKF2 412 aa17.87■□□□□ 0.45
TRAPPC4-211ENST00000533012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC4-211ENST00000533012 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
TRAPPC4-211ENST00000533012 KDM5BQ9UGL1 1544 aa17.84■□□□□ 0.45
TRAPPC4-211ENST00000533012 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.45
TRAPPC4-211ENST00000533012 ATP10BO94823 1461 aa17.82■□□□□ 0.44
TRAPPC4-211ENST00000533012 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-211ENST00000533012 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
TRAPPC4-211ENST00000533012 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-211ENST00000533012 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
TRAPPC4-211ENST00000533012 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC4-211ENST00000533012 ASXL2Q76L83 1435 aa17.76■□□□□ 0.43
TRAPPC4-211ENST00000533012 MAPKBP1O60336 1514 aa17.76■□□□□ 0.43
TRAPPC4-211ENST00000533012 ZCCHC11Q5TAX3 1644 aaKnown RBP17.75■□□□□ 0.43
TRAPPC4-211ENST00000533012 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
TRAPPC4-211ENST00000533012 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
TRAPPC4-211ENST00000533012 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
TRAPPC4-211ENST00000533012 FYCO1Q9BQS8 1478 aa17.74■□□□□ 0.43
TRAPPC4-211ENST00000533012 EPRSP07814 1512 aaKnown RBP17.73■□□□□ 0.43
TRAPPC4-211ENST00000533012 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
TRAPPC4-211ENST00000533012 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.43
TRAPPC4-211ENST00000533012 ABCC10Q5T3U5 1492 aa17.69■□□□□ 0.42
TRAPPC4-211ENST00000533012 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
TRAPPC4-211ENST00000533012 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
TRAPPC4-211ENST00000533012 CDK13Q14004 1512 aaKnown RBP17.68■□□□□ 0.42
TRAPPC4-211ENST00000533012 APLP2Q06481 763 aa17.68■□□□□ 0.42
TRAPPC4-211ENST00000533012 TROQ12816 1431 aaPredicted RBP17.61■□□□□ 0.41
TRAPPC4-211ENST00000533012 DIP2BQ9P265 1576 aa17.59■□□□□ 0.41
TRAPPC4-211ENST00000533012 MTUS2Q5JR59 1369 aa17.59■□□□□ 0.41
TRAPPC4-211ENST00000533012 GLI2P10070 1586 aa17.58■□□□□ 0.41
TRAPPC4-211ENST00000533012 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.4
TRAPPC4-211ENST00000533012 CD109Q6YHK3 1445 aa17.56■□□□□ 0.4
TRAPPC4-211ENST00000533012 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
TRAPPC4-211ENST00000533012 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC4-211ENST00000533012 TIAM1Q13009 1591 aa17.53■□□□□ 0.4
TRAPPC4-211ENST00000533012 MAGI3Q5TCQ9 1506 aa17.52■□□□□ 0.4
TRAPPC4-211ENST00000533012 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
TRAPPC4-211ENST00000533012 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
TRAPPC4-211ENST00000533012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRAPPC4-211ENST00000533012 KIF14Q15058 1648 aa17.49■□□□□ 0.39
TRAPPC4-211ENST00000533012 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
TRAPPC4-211ENST00000533012 EHBP1L1Q8N3D4 1523 aa17.47■□□□□ 0.39
TRAPPC4-211ENST00000533012 MAP3K4Q9Y6R4 1608 aa17.47■□□□□ 0.39
TRAPPC4-211ENST00000533012 CFAP43Q8NDM7 1665 aa17.46■□□□□ 0.39
TRAPPC4-211ENST00000533012 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
TRAPPC4-211ENST00000533012 EFCAB2Q5VUJ9 269 aa17.46■□□□□ 0.39
TRAPPC4-211ENST00000533012 PLCH2O75038 1416 aa17.46■□□□□ 0.39
TRAPPC4-211ENST00000533012 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
TRAPPC4-211ENST00000533012 TTC37Q6PGP7 1564 aa17.42■□□□□ 0.38
TRAPPC4-211ENST00000533012 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
TRAPPC4-211ENST00000533012 TSPOAP1O95153 1857 aa17.41■□□□□ 0.38
TRAPPC4-211ENST00000533012 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
TRAPPC4-211ENST00000533012 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
TRAPPC4-211ENST00000533012 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
TRAPPC4-211ENST00000533012 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
TRAPPC4-211ENST00000533012 FANCAO15360 1455 aa17.39■□□□□ 0.37
TRAPPC4-211ENST00000533012 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC4-211ENST00000533012 NEO1Q92859 1461 aa17.38■□□□□ 0.37
TRAPPC4-211ENST00000533012 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
TRAPPC4-211ENST00000533012 AKNAQ7Z591 1439 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms