RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 PRG4Q92954 1404 aaPredicted RBP24.34■■□□□ 1.49
PUF60-220ENST00000532884 SHROOM2Q13796 1616 aa24.31■■□□□ 1.48
PUF60-220ENST00000532884 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
PUF60-220ENST00000532884 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
PUF60-220ENST00000532884 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
PUF60-220ENST00000532884 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
PUF60-220ENST00000532884 CSRNP3Q8WYN3 585 aa24.2■■□□□ 1.46
PUF60-220ENST00000532884 TRHP20396 242 aaPredicted RBP24.19■■□□□ 1.46
PUF60-220ENST00000532884 TTBK1Q5TCY1 1321 aaPredicted RBP24.18■■□□□ 1.46
PUF60-220ENST00000532884 PRXQ9BXM0 1461 aa24.14■■□□□ 1.46
PUF60-220ENST00000532884 IQGAP2Q13576 1575 aa24.13■■□□□ 1.45
PUF60-220ENST00000532884 EEA1Q15075 1411 aa24.09■■□□□ 1.45
PUF60-220ENST00000532884 CARMIL2Q6F5E8 1435 aa24.09■■□□□ 1.45
PUF60-220ENST00000532884 PTPRGP23470 1445 aa24.04■■□□□ 1.44
PUF60-220ENST00000532884 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
PUF60-220ENST00000532884 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
PUF60-220ENST00000532884 NPM1P06748 294 aaKnown RBP eCLIP24■■□□□ 1.43
PUF60-220ENST00000532884 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
PUF60-220ENST00000532884 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
PUF60-220ENST00000532884 CTTNBP2Q8WZ74 1663 aa23.96■■□□□ 1.43
PUF60-220ENST00000532884 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
PUF60-220ENST00000532884 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
PUF60-220ENST00000532884 P3H3Q8IVL6 736 aa23.9■■□□□ 1.42
PUF60-220ENST00000532884 KIAA0556O60303 1618 aa23.89■■□□□ 1.42
PUF60-220ENST00000532884 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
PUF60-220ENST00000532884 UBTFP17480 764 aaKnown RBP23.85■■□□□ 1.41
PUF60-220ENST00000532884 UACAQ9BZF9 1416 aa23.84■■□□□ 1.41
PUF60-220ENST00000532884 KIF21BO75037 1637 aa23.82■■□□□ 1.4
PUF60-220ENST00000532884 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
PUF60-220ENST00000532884 ABCC2Q92887 1545 aa23.77■■□□□ 1.4
PUF60-220ENST00000532884 UHRF1BP1LA0JNW5 1464 aa23.75■■□□□ 1.39
PUF60-220ENST00000532884 PLB1Q6P1J6 1458 aa23.75■■□□□ 1.39
PUF60-220ENST00000532884 MAPKBP1O60336 1514 aa23.74■■□□□ 1.39
PUF60-220ENST00000532884 ARID3CA6NKF2 412 aa23.7■■□□□ 1.38
PUF60-220ENST00000532884 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
PUF60-220ENST00000532884 ASXL2Q76L83 1435 aa23.67■■□□□ 1.38
PUF60-220ENST00000532884 SAMD9Q5K651 1589 aa23.66■■□□□ 1.38
PUF60-220ENST00000532884 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
PUF60-220ENST00000532884 FHOD3Q2V2M9 1422 aa23.65■■□□□ 1.38
PUF60-220ENST00000532884 ABCA8O94911 1581 aa23.64■■□□□ 1.37
PUF60-220ENST00000532884 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
PUF60-220ENST00000532884 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
PUF60-220ENST00000532884 ZCCHC11Q5TAX3 1644 aaKnown RBP23.61■■□□□ 1.37
PUF60-220ENST00000532884 EFCAB5A4FU69 1503 aa23.56■■□□□ 1.36
PUF60-220ENST00000532884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.56■■□□□ 1.36
PUF60-220ENST00000532884 HNRNPUL2Q1KMD3 747 aaKnown RBP23.56■■□□□ 1.36
PUF60-220ENST00000532884 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
PUF60-220ENST00000532884 ATP10BO94823 1461 aa23.51■■□□□ 1.35
PUF60-220ENST00000532884 WDR7Q9Y4E6 1490 aa23.5■■□□□ 1.35
PUF60-220ENST00000532884 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
PUF60-220ENST00000532884 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
PUF60-220ENST00000532884 RAPGEF6Q8TEU7 1601 aa23.5■■□□□ 1.35
PUF60-220ENST00000532884 ARHGAP35Q9NRY4 1499 aa23.49■■□□□ 1.35
PUF60-220ENST00000532884 TSPOAP1O95153 1857 aa23.48■■□□□ 1.35
PUF60-220ENST00000532884 GLI2P10070 1586 aa23.44■■□□□ 1.34
PUF60-220ENST00000532884 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
PUF60-220ENST00000532884 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
PUF60-220ENST00000532884 LOC105371045A0A1W2PR82 267 aa23.37■■□□□ 1.33
PUF60-220ENST00000532884 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
PUF60-220ENST00000532884 CLIP1P30622 1438 aa23.35■■□□□ 1.33
PUF60-220ENST00000532884 CD109Q6YHK3 1445 aa23.34■■□□□ 1.33
PUF60-220ENST00000532884 MAP3K4Q9Y6R4 1608 aa23.33■■□□□ 1.33
PUF60-220ENST00000532884 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
PUF60-220ENST00000532884 PPRC1Q5VV67 1664 aaKnown RBP23.31■■□□□ 1.32
PUF60-220ENST00000532884 KDM6BO15054 1643 aa23.3■■□□□ 1.32
PUF60-220ENST00000532884 TEX14Q8IWB6 1497 aa23.29■■□□□ 1.32
PUF60-220ENST00000532884 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
PUF60-220ENST00000532884 CFAP43Q8NDM7 1665 aa23.25■■□□□ 1.31
PUF60-220ENST00000532884 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
PUF60-220ENST00000532884 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
PUF60-220ENST00000532884 CEP162Q5TB80 1403 aa23.22■■□□□ 1.31
PUF60-220ENST00000532884 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
PUF60-220ENST00000532884 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
PUF60-220ENST00000532884 ABCA9Q8IUA7 1624 aa23.19■■□□□ 1.3
PUF60-220ENST00000532884 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
PUF60-220ENST00000532884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.29
PUF60-220ENST00000532884 FYCO1Q9BQS8 1478 aa23.11■■□□□ 1.29
PUF60-220ENST00000532884 LRRIQ1Q96JM4 1722 aa23.11■■□□□ 1.29
PUF60-220ENST00000532884 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
PUF60-220ENST00000532884 CCDC18Q5T9S5 1454 aa23.09■■□□□ 1.29
PUF60-220ENST00000532884 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
PUF60-220ENST00000532884 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.29
PUF60-220ENST00000532884 RAPGEF3O95398 923 aa23.06■■□□□ 1.28
PUF60-220ENST00000532884 NEO1Q92859 1461 aa23.05■■□□□ 1.28
PUF60-220ENST00000532884 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
PUF60-220ENST00000532884 FANCAO15360 1455 aa23.04■■□□□ 1.28
PUF60-220ENST00000532884 KIF14Q15058 1648 aa23.03■■□□□ 1.28
PUF60-220ENST00000532884 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
PUF60-220ENST00000532884 PLCH2O75038 1416 aa23■■□□□ 1.27
PUF60-220ENST00000532884 AKNAQ7Z591 1439 aa23■■□□□ 1.27
PUF60-220ENST00000532884 EFCAB2Q5VUJ9 269 aa22.98■■□□□ 1.27
PUF60-220ENST00000532884 MTUS2Q5JR59 1369 aa22.95■■□□□ 1.26
PUF60-220ENST00000532884 DENND4BO75064 1496 aaPredicted RBP22.93■■□□□ 1.26
PUF60-220ENST00000532884 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
PUF60-220ENST00000532884 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
PUF60-220ENST00000532884 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
PUF60-220ENST00000532884 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
PUF60-220ENST00000532884 KDM4FA0A1W2PPD8 638 aa22.91■■□□□ 1.26
PUF60-220ENST00000532884 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
PUF60-220ENST00000532884 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms