RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
CAPRIN1-212ENST00000532820 CUL7Q14999 1698 aa20.16■□□□□ 0.82
CAPRIN1-212ENST00000532820 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
CAPRIN1-212ENST00000532820 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
CAPRIN1-212ENST00000532820 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
CAPRIN1-212ENST00000532820 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
CAPRIN1-212ENST00000532820 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
CAPRIN1-212ENST00000532820 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
CAPRIN1-212ENST00000532820 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
CAPRIN1-212ENST00000532820 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
CAPRIN1-212ENST00000532820 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
CAPRIN1-212ENST00000532820 FAM50AQ14320 339 aaKnown RBP20.01■□□□□ 0.79
CAPRIN1-212ENST00000532820 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
CAPRIN1-212ENST00000532820 RRBP1Q9P2E9 1410 aaKnown RBP19.99■□□□□ 0.79
CAPRIN1-212ENST00000532820 PHLDB1Q86UU1 1377 aa19.99■□□□□ 0.79
CAPRIN1-212ENST00000532820 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
CAPRIN1-212ENST00000532820 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CAPRIN1-212ENST00000532820 WDR62O43379 1518 aa19.98■□□□□ 0.79
CAPRIN1-212ENST00000532820 FBLN2P98095 1184 aa19.97■□□□□ 0.79
CAPRIN1-212ENST00000532820 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
CAPRIN1-212ENST00000532820 IFT140Q96RY7 1462 aa19.97■□□□□ 0.79
CAPRIN1-212ENST00000532820 CASKIN1Q8WXD9 1431 aa19.94■□□□□ 0.78
CAPRIN1-212ENST00000532820 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
CAPRIN1-212ENST00000532820 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
CAPRIN1-212ENST00000532820 ADAMTS12P58397 1594 aa19.91■□□□□ 0.78
CAPRIN1-212ENST00000532820 MAP3K1Q13233 1512 aa19.91■□□□□ 0.78
CAPRIN1-212ENST00000532820 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
CAPRIN1-212ENST00000532820 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
CAPRIN1-212ENST00000532820 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
CAPRIN1-212ENST00000532820 CHMP7Q8WUX9 453 aaPredicted RBP19.86■□□□□ 0.77
CAPRIN1-212ENST00000532820 CFAP43Q8NDM7 1665 aa19.86■□□□□ 0.77
CAPRIN1-212ENST00000532820 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
CAPRIN1-212ENST00000532820 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
CAPRIN1-212ENST00000532820 THOC2Q8NI27 1593 aaKnown RBP19.84■□□□□ 0.77
CAPRIN1-212ENST00000532820 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
CAPRIN1-212ENST00000532820 RAB3GAP2Q9H2M9 1393 aa19.79■□□□□ 0.76
CAPRIN1-212ENST00000532820 LRRIQ1Q96JM4 1722 aa19.77■□□□□ 0.76
CAPRIN1-212ENST00000532820 DIEXFQ68CQ4 756 aaKnown RBP19.77■□□□□ 0.75
CAPRIN1-212ENST00000532820 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
CAPRIN1-212ENST00000532820 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
CAPRIN1-212ENST00000532820 KIAA0586Q9BVV6 1533 aa19.72■□□□□ 0.75
CAPRIN1-212ENST00000532820 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
CAPRIN1-212ENST00000532820 FGD6Q6ZV73 1430 aa19.7■□□□□ 0.74
CAPRIN1-212ENST00000532820 NCOA2Q15596 1464 aa19.7■□□□□ 0.74
CAPRIN1-212ENST00000532820 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
CAPRIN1-212ENST00000532820 MAGI3Q5TCQ9 1506 aa19.69■□□□□ 0.74
CAPRIN1-212ENST00000532820 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
CAPRIN1-212ENST00000532820 DISP1Q96F81 1524 aa19.67■□□□□ 0.74
CAPRIN1-212ENST00000532820 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
CAPRIN1-212ENST00000532820 UGGT2Q9NYU1 1516 aa19.67■□□□□ 0.74
CAPRIN1-212ENST00000532820 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
CAPRIN1-212ENST00000532820 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
CAPRIN1-212ENST00000532820 CHIC2Q9UKJ5 165 aa19.64■□□□□ 0.73
CAPRIN1-212ENST00000532820 CEP170Q5SW79 1584 aa19.64■□□□□ 0.73
CAPRIN1-212ENST00000532820 NEUROD1Q13562 356 aa19.63■□□□□ 0.73
CAPRIN1-212ENST00000532820 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
CAPRIN1-212ENST00000532820 MYOM3Q5VTT5 1437 aa19.62■□□□□ 0.73
CAPRIN1-212ENST00000532820 HECW1Q76N89 1606 aa19.62■□□□□ 0.73
CAPRIN1-212ENST00000532820 KIAA0556O60303 1618 aa19.62■□□□□ 0.73
CAPRIN1-212ENST00000532820 PTPRKQ15262 1439 aa19.61■□□□□ 0.73
CAPRIN1-212ENST00000532820 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
CAPRIN1-212ENST00000532820 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
CAPRIN1-212ENST00000532820 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
CAPRIN1-212ENST00000532820 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
CAPRIN1-212ENST00000532820 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.72
CAPRIN1-212ENST00000532820 PLB1Q6P1J6 1458 aa19.56■□□□□ 0.72
CAPRIN1-212ENST00000532820 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
CAPRIN1-212ENST00000532820 MAPKBP1O60336 1514 aa19.54■□□□□ 0.72
CAPRIN1-212ENST00000532820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.54■□□□□ 0.72
CAPRIN1-212ENST00000532820 NUP160Q12769 1436 aa19.52■□□□□ 0.72
CAPRIN1-212ENST00000532820 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
CAPRIN1-212ENST00000532820 PTPN23Q9H3S7 1636 aa19.51■□□□□ 0.71
CAPRIN1-212ENST00000532820 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
CAPRIN1-212ENST00000532820 CDK11AQ9UQ88 783 aaPredicted RBP19.49■□□□□ 0.71
CAPRIN1-212ENST00000532820 PRG4Q92954 1404 aaPredicted RBP19.49■□□□□ 0.71
CAPRIN1-212ENST00000532820 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
CAPRIN1-212ENST00000532820 ARHGEF11O15085 1522 aa19.48■□□□□ 0.71
CAPRIN1-212ENST00000532820 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
CAPRIN1-212ENST00000532820 MIER1Q8N108 512 aa19.44■□□□□ 0.7
CAPRIN1-212ENST00000532820 NAIPQ13075 1403 aa19.44■□□□□ 0.7
CAPRIN1-212ENST00000532820 HFM1A2PYH4 1435 aa19.44■□□□□ 0.7
CAPRIN1-212ENST00000532820 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
CAPRIN1-212ENST00000532820 YTHDC1Q96MU7 727 aaKnown RBP19.39■□□□□ 0.69
CAPRIN1-212ENST00000532820 CFDP1Q9UEE9 299 aaPredicted RBP19.39■□□□□ 0.69
CAPRIN1-212ENST00000532820 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
CAPRIN1-212ENST00000532820 PLEKHD1A6NEE1 506 aa19.37■□□□□ 0.69
CAPRIN1-212ENST00000532820 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
CAPRIN1-212ENST00000532820 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
CAPRIN1-212ENST00000532820 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
CAPRIN1-212ENST00000532820 PTPRGP23470 1445 aa19.35■□□□□ 0.69
CAPRIN1-212ENST00000532820 CHD1O14646 1710 aa19.35■□□□□ 0.69
CAPRIN1-212ENST00000532820 FOXD1Q16676 465 aa19.34■□□□□ 0.69
CAPRIN1-212ENST00000532820 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
CAPRIN1-212ENST00000532820 KIF14Q15058 1648 aa19.32■□□□□ 0.68
CAPRIN1-212ENST00000532820 KDM6BO15054 1643 aa19.31■□□□□ 0.68
CAPRIN1-212ENST00000532820 ATP10BO94823 1461 aa19.31■□□□□ 0.68
CAPRIN1-212ENST00000532820 DAPK1P53355 1430 aa19.3■□□□□ 0.68
CAPRIN1-212ENST00000532820 ABCC5O15440 1437 aa19.29■□□□□ 0.68
CAPRIN1-212ENST00000532820 TONSLQ96HA7 1378 aa19.27■□□□□ 0.68
CAPRIN1-212ENST00000532820 GPATCH8Q9UKJ3 1502 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms