RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 RUSC2Q8N2Y8 1516 aa39.76■■■■□ 3.96
LTBP3-220ENST00000532661 CUL7Q14999 1698 aa39.72■■■■□ 3.95
LTBP3-220ENST00000532661 CARMIL1Q5VZK9 1371 aa39.68■■■■□ 3.94
LTBP3-220ENST00000532661 KIAA0586Q9BVV6 1533 aa39.64■■■■□ 3.94
LTBP3-220ENST00000532661 RAPGEF2Q9Y4G8 1499 aa39.32■■■■□ 3.89
LTBP3-220ENST00000532661 IQGAP2Q13576 1575 aa39.28■■■■□ 3.88
LTBP3-220ENST00000532661 TTBK1Q5TCY1 1321 aaPredicted RBP39.27■■■■□ 3.88
LTBP3-220ENST00000532661 ADCY10Q96PN6 1610 aa39.26■■■■□ 3.88
LTBP3-220ENST00000532661 NPM1P06748 294 aaKnown RBP eCLIP39.26■■■■□ 3.88
LTBP3-220ENST00000532661 PTPRGP23470 1445 aa39.23■■■■□ 3.87
LTBP3-220ENST00000532661 CARMIL2Q6F5E8 1435 aa39.22■■■■□ 3.87
LTBP3-220ENST00000532661 TNIKQ9UKE5 1360 aa39.18■■■■□ 3.86
LTBP3-220ENST00000532661 DISP1Q96F81 1524 aa39.12■■■■□ 3.85
LTBP3-220ENST00000532661 KIF13AQ9H1H9 1805 aa39.12■■■■□ 3.85
LTBP3-220ENST00000532661 MAPKBP1O60336 1514 aa39.11■■■■□ 3.85
LTBP3-220ENST00000532661 FAM69CQ0P6D2 419 aa39.09■■■■□ 3.85
LTBP3-220ENST00000532661 ABCC10Q5T3U5 1492 aa39.07■■■■□ 3.85
LTBP3-220ENST00000532661 UGGT2Q9NYU1 1516 aa39.05■■■■□ 3.84
LTBP3-220ENST00000532661 PRXQ9BXM0 1461 aa39.03■■■■□ 3.84
LTBP3-220ENST00000532661 DIP2BQ9P265 1576 aa38.96■■■■□ 3.83
LTBP3-220ENST00000532661 ABCC2Q92887 1545 aa38.94■■■■□ 3.82
LTBP3-220ENST00000532661 UACAQ9BZF9 1416 aa38.93■■■■□ 3.82
LTBP3-220ENST00000532661 KIAA0556O60303 1618 aa38.92■■■■□ 3.82
LTBP3-220ENST00000532661 UHRF1BP1LA0JNW5 1464 aa38.9■■■■□ 3.82
LTBP3-220ENST00000532661 CTTNBP2Q8WZ74 1663 aa38.88■■■■□ 3.81
LTBP3-220ENST00000532661 CSRNP3Q8WYN3 585 aa38.86■■■■□ 3.81
LTBP3-220ENST00000532661 ASXL2Q76L83 1435 aa38.8■■■■□ 3.8
LTBP3-220ENST00000532661 GOLGA3Q08378 1498 aa38.75■■■■□ 3.79
LTBP3-220ENST00000532661 KDM5BQ9UGL1 1544 aa38.73■■■■□ 3.79
LTBP3-220ENST00000532661 PLB1Q6P1J6 1458 aa38.73■■■■□ 3.79
LTBP3-220ENST00000532661 FAM9AQ8IZU1 332 aaPredicted RBP38.67■■■■□ 3.78
LTBP3-220ENST00000532661 TSPOAP1O95153 1857 aa38.66■■■■□ 3.78
LTBP3-220ENST00000532661 EEA1Q15075 1411 aa38.65■■■■□ 3.78
LTBP3-220ENST00000532661 ZCCHC11Q5TAX3 1644 aaKnown RBP38.63■■■■□ 3.77
LTBP3-220ENST00000532661 P3H3Q8IVL6 736 aa38.62■■■■□ 3.77
LTBP3-220ENST00000532661 GLI2P10070 1586 aa38.59■■■■□ 3.77
LTBP3-220ENST00000532661 ABCA8O94911 1581 aa38.56■■■■□ 3.76
LTBP3-220ENST00000532661 EPRSP07814 1512 aaKnown RBP38.55■■■■□ 3.76
LTBP3-220ENST00000532661 AEBP2Q6ZN18 517 aaPredicted RBP38.53■■■■□ 3.76
LTBP3-220ENST00000532661 KDM6BO15054 1643 aa38.52■■■■□ 3.76
LTBP3-220ENST00000532661 CHIC1Q5VXU3 224 aa38.5■■■■□ 3.75
LTBP3-220ENST00000532661 PPRC1Q5VV67 1664 aaKnown RBP38.46■■■■□ 3.75
LTBP3-220ENST00000532661 RANGAP1P46060 587 aaPredicted RBP38.45■■■■□ 3.75
LTBP3-220ENST00000532661 WDR7Q9Y4E6 1490 aa38.45■■■■□ 3.75
LTBP3-220ENST00000532661 SAMD9Q5K651 1589 aa38.41■■■■□ 3.74
LTBP3-220ENST00000532661 ARID3CA6NKF2 412 aa38.4■■■■□ 3.74
LTBP3-220ENST00000532661 MAP3K4Q9Y6R4 1608 aa38.38■■■■□ 3.74
LTBP3-220ENST00000532661 KCNH8Q96L42 1107 aa38.37■■■■□ 3.73
LTBP3-220ENST00000532661 KIF21BO75037 1637 aa38.31■■■■□ 3.72
LTBP3-220ENST00000532661 ATP10BO94823 1461 aa38.29■■■■□ 3.72
LTBP3-220ENST00000532661 EHMT2Q96KQ7 1210 aa38.29■■■■□ 3.72
LTBP3-220ENST00000532661 COL17A1Q9UMD9 1497 aaPredicted RBP38.28■■■■□ 3.72
LTBP3-220ENST00000532661 FHOD3Q2V2M9 1422 aa38.26■■■■□ 3.72
LTBP3-220ENST00000532661 TEX14Q8IWB6 1497 aa38.25■■■■□ 3.71
LTBP3-220ENST00000532661 CD109Q6YHK3 1445 aa38.21■■■■□ 3.71
LTBP3-220ENST00000532661 RAPGEF6Q8TEU7 1601 aa38.2■■■■□ 3.7
LTBP3-220ENST00000532661 UBTFP17480 764 aaKnown RBP38.14■■■■□ 3.7
LTBP3-220ENST00000532661 MAGI3Q5TCQ9 1506 aa38.12■■■■□ 3.69
LTBP3-220ENST00000532661 CFAP43Q8NDM7 1665 aa38.12■■■■□ 3.69
LTBP3-220ENST00000532661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.12■■■■□ 3.69
LTBP3-220ENST00000532661 HNRNPUL2Q1KMD3 747 aaKnown RBP38.12■■■■□ 3.69
LTBP3-220ENST00000532661 NUP153P49790 1475 aaKnown RBP38.11■■■■□ 3.69
LTBP3-220ENST00000532661 KDM4FA0A1W2PPD8 638 aa38.1■■■■□ 3.69
LTBP3-220ENST00000532661 EFCAB5A4FU69 1503 aa38.07■■■■□ 3.69
LTBP3-220ENST00000532661 ABCA9Q8IUA7 1624 aa37.94■■■■□ 3.66
LTBP3-220ENST00000532661 PLEKHD1A6NEE1 506 aa37.89■■■■□ 3.66
LTBP3-220ENST00000532661 ARHGAP35Q9NRY4 1499 aa37.89■■■■□ 3.66
LTBP3-220ENST00000532661 ARAP3Q8WWN8 1544 aa37.82■■■■□ 3.64
LTBP3-220ENST00000532661 ADGRL1O94910 1474 aa37.81■■■■□ 3.64
LTBP3-220ENST00000532661 CDK13Q14004 1512 aaKnown RBP37.79■■■■□ 3.64
LTBP3-220ENST00000532661 ATP1B4Q9UN42 357 aaPredicted RBP37.79■■■■□ 3.64
LTBP3-220ENST00000532661 FMN1Q68DA7 1419 aa37.77■■■■□ 3.64
LTBP3-220ENST00000532661 PHLDB1Q86UU1 1377 aa37.75■■■■□ 3.63
LTBP3-220ENST00000532661 NEO1Q92859 1461 aa37.72■■■■□ 3.63
LTBP3-220ENST00000532661 RAPGEF3O95398 923 aa37.71■■■■□ 3.63
LTBP3-220ENST00000532661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.68■■■■□ 3.62
LTBP3-220ENST00000532661 HECW1Q76N89 1606 aa37.64■■■■□ 3.62
LTBP3-220ENST00000532661 TTC37Q6PGP7 1564 aa37.62■■■■□ 3.61
LTBP3-220ENST00000532661 AKNAQ7Z591 1439 aa37.56■■■■□ 3.6
LTBP3-220ENST00000532661 FANCAO15360 1455 aa37.56■■■■□ 3.6
LTBP3-220ENST00000532661 FRMPD1Q5SYB0 1578 aa37.54■■■■□ 3.6
LTBP3-220ENST00000532661 CDK11AQ9UQ88 783 aaPredicted RBP37.52■■■■□ 3.6
LTBP3-220ENST00000532661 DENND4BO75064 1496 aaPredicted RBP37.49■■■■□ 3.59
LTBP3-220ENST00000532661 PLCH2O75038 1416 aa37.46■■■■□ 3.59
LTBP3-220ENST00000532661 LRRIQ1Q96JM4 1722 aa37.44■■■■□ 3.58
LTBP3-220ENST00000532661 TROQ12816 1431 aaPredicted RBP37.44■■■■□ 3.58
LTBP3-220ENST00000532661 CFAP74Q9C0B2 1584 aa37.43■■■■□ 3.58
LTBP3-220ENST00000532661 CASKIN1Q8WXD9 1431 aa37.43■■■■□ 3.58
LTBP3-220ENST00000532661 PCF11O94913 1555 aaKnown RBP37.42■■■■□ 3.58
LTBP3-220ENST00000532661 KIF14Q15058 1648 aa37.41■■■■□ 3.58
LTBP3-220ENST00000532661 CLIP1P30622 1438 aa37.41■■■■□ 3.58
LTBP3-220ENST00000532661 RICTORQ6R327 1708 aa37.38■■■■□ 3.57
LTBP3-220ENST00000532661 EFCAB2Q5VUJ9 269 aa37.34■■■■□ 3.57
LTBP3-220ENST00000532661 SCAPERQ9BY12 1400 aa37.34■■■■□ 3.57
LTBP3-220ENST00000532661 CCDC18Q5T9S5 1454 aa37.31■■■■□ 3.56
LTBP3-220ENST00000532661 ARID4BQ4LE39 1312 aaPredicted RBP37.31■■■■□ 3.56
LTBP3-220ENST00000532661 MYO5CQ9NQX4 1742 aa37.28■■■■□ 3.56
LTBP3-220ENST00000532661 ARHGEF40Q8TER5 1519 aa37.28■■■■□ 3.56
LTBP3-220ENST00000532661 FYCO1Q9BQS8 1478 aa37.26■■■■□ 3.56
LTBP3-220ENST00000532661 YEATS2Q9ULM3 1422 aa37.26■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms