RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
SSH3-209ENST00000532600 JPH4Q96JJ6 628 aa32.85■■■□□ 2.85
SSH3-209ENST00000532600 CARMIL1Q5VZK9 1371 aa32.75■■■□□ 2.83
SSH3-209ENST00000532600 KIAA0586Q9BVV6 1533 aa32.75■■■□□ 2.83
SSH3-209ENST00000532600 ADCY10Q96PN6 1610 aa32.5■■■□□ 2.79
SSH3-209ENST00000532600 RAPGEF2Q9Y4G8 1499 aa32.49■■■□□ 2.79
SSH3-209ENST00000532600 IQGAP2Q13576 1575 aa32.49■■■□□ 2.79
SSH3-209ENST00000532600 KIF13AQ9H1H9 1805 aa32.42■■■□□ 2.78
SSH3-209ENST00000532600 DISP1Q96F81 1524 aa32.37■■■□□ 2.77
SSH3-209ENST00000532600 PTPRGP23470 1445 aa32.35■■■□□ 2.77
SSH3-209ENST00000532600 MAPKBP1O60336 1514 aa32.35■■■□□ 2.77
SSH3-209ENST00000532600 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
SSH3-209ENST00000532600 TNIKQ9UKE5 1360 aa32.33■■■□□ 2.77
SSH3-209ENST00000532600 UGGT2Q9NYU1 1516 aa32.31■■■□□ 2.76
SSH3-209ENST00000532600 PRXQ9BXM0 1461 aa32.29■■■□□ 2.76
SSH3-209ENST00000532600 ABCC10Q5T3U5 1492 aa32.28■■■□□ 2.76
SSH3-209ENST00000532600 TTBK1Q5TCY1 1321 aaPredicted RBP32.27■■■□□ 2.76
SSH3-209ENST00000532600 NPM1P06748 294 aaKnown RBP eCLIP32.27■■■□□ 2.76
SSH3-209ENST00000532600 CTTNBP2Q8WZ74 1663 aa32.24■■■□□ 2.75
SSH3-209ENST00000532600 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
SSH3-209ENST00000532600 KIAA0556O60303 1618 aa32.22■■■□□ 2.75
SSH3-209ENST00000532600 ABCC2Q92887 1545 aa32.18■■■□□ 2.74
SSH3-209ENST00000532600 FAM69CQ0P6D2 419 aa32.18■■■□□ 2.74
SSH3-209ENST00000532600 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
SSH3-209ENST00000532600 UACAQ9BZF9 1416 aa32.15■■■□□ 2.74
SSH3-209ENST00000532600 CSRNP3Q8WYN3 585 aa32.05■■■□□ 2.72
SSH3-209ENST00000532600 ASXL2Q76L83 1435 aa32.04■■■□□ 2.72
SSH3-209ENST00000532600 KDM5BQ9UGL1 1544 aa32.03■■■□□ 2.72
SSH3-209ENST00000532600 GOLGA3Q08378 1498 aa32■■■□□ 2.71
SSH3-209ENST00000532600 ZCCHC11Q5TAX3 1644 aaKnown RBP31.97■■■□□ 2.71
SSH3-209ENST00000532600 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
SSH3-209ENST00000532600 TSPOAP1O95153 1857 aa31.96■■■□□ 2.71
SSH3-209ENST00000532600 EEA1Q15075 1411 aa31.94■■■□□ 2.7
SSH3-209ENST00000532600 ABCA8O94911 1581 aa31.93■■■□□ 2.7
SSH3-209ENST00000532600 GLI2P10070 1586 aa31.93■■■□□ 2.7
SSH3-209ENST00000532600 PPRC1Q5VV67 1664 aaKnown RBP31.89■■■□□ 2.7
SSH3-209ENST00000532600 EPRSP07814 1512 aaKnown RBP31.86■■■□□ 2.69
SSH3-209ENST00000532600 FAM9AQ8IZU1 332 aaPredicted RBP31.84■■■□□ 2.69
SSH3-209ENST00000532600 SAMD9Q5K651 1589 aa31.84■■■□□ 2.69
SSH3-209ENST00000532600 KDM6BO15054 1643 aa31.82■■■□□ 2.68
SSH3-209ENST00000532600 CHIC1Q5VXU3 224 aa31.8■■■□□ 2.68
SSH3-209ENST00000532600 P3H3Q8IVL6 736 aa31.8■■■□□ 2.68
SSH3-209ENST00000532600 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
SSH3-209ENST00000532600 WDR7Q9Y4E6 1490 aa31.76■■■□□ 2.67
SSH3-209ENST00000532600 KIF21BO75037 1637 aa31.75■■■□□ 2.67
SSH3-209ENST00000532600 ATP10BO94823 1461 aa31.65■■■□□ 2.66
SSH3-209ENST00000532600 COL17A1Q9UMD9 1497 aaPredicted RBP31.64■■■□□ 2.66
SSH3-209ENST00000532600 ARID3CA6NKF2 412 aa31.61■■■□□ 2.65
SSH3-209ENST00000532600 RANGAP1P46060 587 aaPredicted RBP31.61■■■□□ 2.65
SSH3-209ENST00000532600 RAPGEF6Q8TEU7 1601 aa31.6■■■□□ 2.65
SSH3-209ENST00000532600 FHOD3Q2V2M9 1422 aa31.6■■■□□ 2.65
SSH3-209ENST00000532600 AEBP2Q6ZN18 517 aaPredicted RBP31.6■■■□□ 2.65
SSH3-209ENST00000532600 KCNH8Q96L42 1107 aa31.57■■■□□ 2.64
SSH3-209ENST00000532600 TEX14Q8IWB6 1497 aa31.56■■■□□ 2.64
SSH3-209ENST00000532600 CFAP43Q8NDM7 1665 aa31.55■■■□□ 2.64
SSH3-209ENST00000532600 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
SSH3-209ENST00000532600 CD109Q6YHK3 1445 aa31.52■■■□□ 2.64
SSH3-209ENST00000532600 MAGI3Q5TCQ9 1506 aa31.51■■■□□ 2.63
SSH3-209ENST00000532600 EFCAB5A4FU69 1503 aa31.5■■■□□ 2.63
SSH3-209ENST00000532600 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
SSH3-209ENST00000532600 KDM4FA0A1W2PPD8 638 aa31.41■■■□□ 2.62
SSH3-209ENST00000532600 ABCA9Q8IUA7 1624 aa31.4■■■□□ 2.62
SSH3-209ENST00000532600 UBTFP17480 764 aaKnown RBP31.39■■■□□ 2.62
SSH3-209ENST00000532600 ARHGAP35Q9NRY4 1499 aa31.33■■■□□ 2.61
SSH3-209ENST00000532600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.32■■■□□ 2.6
SSH3-209ENST00000532600 HNRNPUL2Q1KMD3 747 aaKnown RBP31.32■■■□□ 2.6
SSH3-209ENST00000532600 ARAP3Q8WWN8 1544 aa31.26■■■□□ 2.59
SSH3-209ENST00000532600 CDK13Q14004 1512 aaKnown RBP31.25■■■□□ 2.59
SSH3-209ENST00000532600 ADGRL1O94910 1474 aa31.21■■■□□ 2.59
SSH3-209ENST00000532600 PLEKHD1A6NEE1 506 aa31.2■■■□□ 2.59
SSH3-209ENST00000532600 FMN1Q68DA7 1419 aa31.19■■■□□ 2.58
SSH3-209ENST00000532600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.58
SSH3-209ENST00000532600 NEO1Q92859 1461 aa31.16■■■□□ 2.58
SSH3-209ENST00000532600 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 HECW1Q76N89 1606 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 PHLDB1Q86UU1 1377 aa31.14■■■□□ 2.58
SSH3-209ENST00000532600 FRMPD1Q5SYB0 1578 aa31.1■■■□□ 2.57
SSH3-209ENST00000532600 LRRIQ1Q96JM4 1722 aa31.1■■■□□ 2.57
SSH3-209ENST00000532600 RAPGEF3O95398 923 aa31.08■■■□□ 2.57
SSH3-209ENST00000532600 ATP1B4Q9UN42 357 aaPredicted RBP31.05■■■□□ 2.56
SSH3-209ENST00000532600 FANCAO15360 1455 aa31.01■■■□□ 2.55
SSH3-209ENST00000532600 AKNAQ7Z591 1439 aa31■■■□□ 2.55
SSH3-209ENST00000532600 PCF11O94913 1555 aaKnown RBP30.98■■■□□ 2.55
SSH3-209ENST00000532600 KIF14Q15058 1648 aa30.98■■■□□ 2.55
SSH3-209ENST00000532600 RICTORQ6R327 1708 aa30.97■■■□□ 2.55
SSH3-209ENST00000532600 CFAP74Q9C0B2 1584 aa30.96■■■□□ 2.55
SSH3-209ENST00000532600 CASKIN1Q8WXD9 1431 aa30.95■■■□□ 2.54
SSH3-209ENST00000532600 PLCH2O75038 1416 aa30.94■■■□□ 2.54
SSH3-209ENST00000532600 DENND4BO75064 1496 aaPredicted RBP30.94■■■□□ 2.54
SSH3-209ENST00000532600 TROQ12816 1431 aaPredicted RBP30.92■■■□□ 2.54
SSH3-209ENST00000532600 CLIP1P30622 1438 aa30.9■■■□□ 2.54
SSH3-209ENST00000532600 CDK11AQ9UQ88 783 aaPredicted RBP30.88■■■□□ 2.53
SSH3-209ENST00000532600 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
SSH3-209ENST00000532600 ARHGEF40Q8TER5 1519 aa30.85■■■□□ 2.53
SSH3-209ENST00000532600 ZMYM4Q5VZL5 1548 aa30.83■■■□□ 2.53
SSH3-209ENST00000532600 CCDC18Q5T9S5 1454 aa30.83■■■□□ 2.53
SSH3-209ENST00000532600 FYCO1Q9BQS8 1478 aa30.82■■■□□ 2.53
SSH3-209ENST00000532600 ADAMTSL3P82987 1691 aa30.81■■■□□ 2.52
SSH3-209ENST00000532600 SCAPERQ9BY12 1400 aa30.8■■■□□ 2.52
SSH3-209ENST00000532600 POGZQ7Z3K3 1410 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms