RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 CTTNBP2Q8WZ74 1663 aa35.05■■■■□ 3.2
SORL1-210ENST00000532451 KIF21AQ7Z4S6 1674 aa35.04■■■■□ 3.2
SORL1-210ENST00000532451 ZNF316A6NFI3 1004 aaPredicted RBP35.04■■■■□ 3.2
SORL1-210ENST00000532451 LRRC9Q6ZRR7 1453 aa35.02■■■■□ 3.2
SORL1-210ENST00000532451 PCF11O94913 1555 aaKnown RBP35.02■■■■□ 3.2
SORL1-210ENST00000532451 CLSPNQ9HAW4 1339 aa35■■■■□ 3.19
SORL1-210ENST00000532451 DHX57Q6P158 1386 aaKnown RBP35■■■■□ 3.19
SORL1-210ENST00000532451 CFAP43Q8NDM7 1665 aa34.99■■■■□ 3.19
SORL1-210ENST00000532451 P3H3Q8IVL6 736 aa34.98■■■■□ 3.19
SORL1-210ENST00000532451 TDRD9Q8NDG6 1382 aaKnown RBP34.98■■■■□ 3.19
SORL1-210ENST00000532451 FHOD3Q2V2M9 1422 aa34.98■■■■□ 3.19
SORL1-210ENST00000532451 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
SORL1-210ENST00000532451 FYCO1Q9BQS8 1478 aa34.92■■■■□ 3.18
SORL1-210ENST00000532451 AQRO60306 1485 aaKnown RBP eCLIP34.9■■■■□ 3.182e-6■■■■□ 25
SORL1-210ENST00000532451 CASKIN1Q8WXD9 1431 aa34.88■■■■□ 3.17
SORL1-210ENST00000532451 TARBP1Q13395 1621 aaKnown RBP34.86■■■■□ 3.17
SORL1-210ENST00000532451 PHLDB1Q86UU1 1377 aa34.83■■■■□ 3.17
SORL1-210ENST00000532451 FMN1Q68DA7 1419 aa34.8■■■■□ 3.16
SORL1-210ENST00000532451 ATP1B4Q9UN42 357 aaPredicted RBP34.79■■■■□ 3.16
SORL1-210ENST00000532451 ITGAEP38570 1179 aa34.78■■■■□ 3.16
SORL1-210ENST00000532451 SAMD9Q5K651 1589 aa34.77■■■■□ 3.16
SORL1-210ENST00000532451 SNAPC4Q5SXM2 1469 aa34.72■■■■□ 3.15
SORL1-210ENST00000532451 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
SORL1-210ENST00000532451 RAB3GAP2Q9H2M9 1393 aa34.67■■■■□ 3.14
SORL1-210ENST00000532451 PBRM1Q86U86 1689 aa34.65■■■■□ 3.14
SORL1-210ENST00000532451 SETD5Q9C0A6 1442 aa34.61■■■■□ 3.13
SORL1-210ENST00000532451 FAM50AQ14320 339 aaKnown RBP34.61■■■■□ 3.13
SORL1-210ENST00000532451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.56■■■■□ 3.12
SORL1-210ENST00000532451 GRIN2BQ13224 1484 aa34.55■■■■□ 3.12
SORL1-210ENST00000532451 SCAF1Q9H7N4 1312 aaKnown RBP34.54■■■■□ 3.12
SORL1-210ENST00000532451 ADAMTS12P58397 1594 aa34.54■■■■□ 3.12
SORL1-210ENST00000532451 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
SORL1-210ENST00000532451 LRRIQ1Q96JM4 1722 aa34.5■■■■□ 3.11
SORL1-210ENST00000532451 ACIN1Q9UKV3 1341 aaKnown RBP34.49■■■■□ 3.11
SORL1-210ENST00000532451 MTUS2Q5JR59 1369 aa34.49■■■■□ 3.11
SORL1-210ENST00000532451 MAPKBP1O60336 1514 aa34.48■■■■□ 3.11
SORL1-210ENST00000532451 IFT140Q96RY7 1462 aa34.45■■■■□ 3.11
SORL1-210ENST00000532451 WDR62O43379 1518 aa34.45■■■■□ 3.11
SORL1-210ENST00000532451 FGD6Q6ZV73 1430 aa34.45■■■■□ 3.11
SORL1-210ENST00000532451 IQGAP2Q13576 1575 aa34.43■■■■□ 3.1
SORL1-210ENST00000532451 CENPBP07199 599 aaPredicted RBP34.43■■■■□ 3.1
SORL1-210ENST00000532451 NEUROD1Q13562 356 aa34.42■■■■□ 3.1
SORL1-210ENST00000532451 EHBP1L1Q8N3D4 1523 aa34.37■■■■□ 3.09
SORL1-210ENST00000532451 MIER1Q8N108 512 aa34.37■■■■□ 3.09
SORL1-210ENST00000532451 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
SORL1-210ENST00000532451 NCOA2Q15596 1464 aa34.35■■■■□ 3.09
SORL1-210ENST00000532451 CCDC18Q5T9S5 1454 aa34.33■■■■□ 3.09
SORL1-210ENST00000532451 SUPT6HQ7KZ85 1726 aaKnown RBP34.33■■■■□ 3.09
SORL1-210ENST00000532451 MYOM3Q5VTT5 1437 aa34.3■■■■□ 3.08
SORL1-210ENST00000532451 HECW1Q76N89 1606 aa34.29■■■■□ 3.08
SORL1-210ENST00000532451 UGGT2Q9NYU1 1516 aa34.26■■■■□ 3.07
SORL1-210ENST00000532451 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
SORL1-210ENST00000532451 MAGI3Q5TCQ9 1506 aa34.23■■■■□ 3.07
SORL1-210ENST00000532451 PTPRKQ15262 1439 aa34.18■■■■□ 3.06
SORL1-210ENST00000532451 EIF4G3O43432 1585 aaKnown RBP34.18■■■■□ 3.06
SORL1-210ENST00000532451 EPRSP07814 1512 aaKnown RBP34.18■■■■□ 3.06
SORL1-210ENST00000532451 ERCC6Q03468 1493 aa34.16■■■■□ 3.06
SORL1-210ENST00000532451 HFM1A2PYH4 1435 aa34.16■■■■□ 3.06
SORL1-210ENST00000532451 KIAA0586Q9BVV6 1533 aa34.16■■■■□ 3.06
SORL1-210ENST00000532451 PTPN23Q9H3S7 1636 aa34.14■■■■□ 3.06
SORL1-210ENST00000532451 SIN3AQ96ST3 1273 aa34.11■■■■□ 3.05
SORL1-210ENST00000532451 GRIN2AQ12879 1464 aa34.11■■■■□ 3.05
SORL1-210ENST00000532451 YTHDC1Q96MU7 727 aaKnown RBP34.08■■■■□ 3.05
SORL1-210ENST00000532451 KIAA0556O60303 1618 aa34.08■■■■□ 3.05
SORL1-210ENST00000532451 CDK13Q14004 1512 aaKnown RBP34.08■■■■□ 3.05
SORL1-210ENST00000532451 TIMELESSQ9UNS1 1208 aa34.08■■■■□ 3.05
SORL1-210ENST00000532451 TCOF1Q13428 1488 aaKnown RBP34.07■■■■□ 3.04
SORL1-210ENST00000532451 DISP1Q96F81 1524 aa34.06■■■■□ 3.04
SORL1-210ENST00000532451 NAIPQ13075 1403 aa34.05■■■■□ 3.04
SORL1-210ENST00000532451 UACAQ9BZF9 1416 aa34.02■■■■□ 3.04
SORL1-210ENST00000532451 MAGI1Q96QZ7 1491 aaPredicted RBP34.02■■■■□ 3.04
SORL1-210ENST00000532451 GTF3C3Q9Y5Q9 886 aa33.99■■■■□ 3.03
SORL1-210ENST00000532451 MIA2Q96PC5 1412 aa33.96■■■■□ 3.03
SORL1-210ENST00000532451 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
SORL1-210ENST00000532451 ARID3CA6NKF2 412 aa33.9■■■■□ 3.02
SORL1-210ENST00000532451 RAPGEF6Q8TEU7 1601 aa33.9■■■■□ 3.02
SORL1-210ENST00000532451 NUP153P49790 1475 aaKnown RBP33.89■■■■□ 3.02
SORL1-210ENST00000532451 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
SORL1-210ENST00000532451 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
SORL1-210ENST00000532451 AKNAQ7Z591 1439 aa33.87■■■■□ 3.01
SORL1-210ENST00000532451 GCC2Q8IWJ2 1684 aa33.86■■■■□ 3.01
SORL1-210ENST00000532451 PPP1R15AO75807 674 aaPredicted RBP33.86■■■■□ 3.01
SORL1-210ENST00000532451 RRP7BPQ9NSQ0 103 aa33.8■■■■□ 3
SORL1-210ENST00000532451 CHIC2Q9UKJ5 165 aa33.79■■■■□ 3
SORL1-210ENST00000532451 TONSLQ96HA7 1378 aa33.79■■■■□ 3
SORL1-210ENST00000532451 NUP160Q12769 1436 aa33.76■■■■□ 3
SORL1-210ENST00000532451 CDK11AQ9UQ88 783 aaPredicted RBP33.75■■■□□ 2.99
SORL1-210ENST00000532451 FBLN2P98095 1184 aa33.72■■■□□ 2.99
SORL1-210ENST00000532451 CARMIL2Q6F5E8 1435 aa33.68■■■□□ 2.98
SORL1-210ENST00000532451 KDM6BO15054 1643 aa33.68■■■□□ 2.98
SORL1-210ENST00000532451 DAPK1P53355 1430 aa33.67■■■□□ 2.98
SORL1-210ENST00000532451 PLB1Q6P1J6 1458 aa33.66■■■□□ 2.98
SORL1-210ENST00000532451 TROQ12816 1431 aaPredicted RBP33.66■■■□□ 2.98
SORL1-210ENST00000532451 DNMT1P26358 1616 aaKnown RBP33.65■■■□□ 2.98
SORL1-210ENST00000532451 JPH4Q96JJ6 628 aa33.64■■■□□ 2.98
SORL1-210ENST00000532451 ROCK1Q13464 1354 aa33.64■■■□□ 2.98
SORL1-210ENST00000532451 DENND4BO75064 1496 aaPredicted RBP33.63■■■□□ 2.97
SORL1-210ENST00000532451 ABCC5O15440 1437 aa33.61■■■□□ 2.97
SORL1-210ENST00000532451 PRG4Q92954 1404 aaPredicted RBP33.61■■■□□ 2.97
SORL1-210ENST00000532451 TRIM52Q96A61 297 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms