RNA–Protein interactions for RNA: ENST00000532266.5

FDFT1-221, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 5

Gene FDFT1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-221ENST00000532266 SYNJ2O15056 1496 aa13.69□□□□□ -0.22
FDFT1-221ENST00000532266 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
FDFT1-221ENST00000532266 P3H3Q8IVL6 736 aa13.67□□□□□ -0.22
FDFT1-221ENST00000532266 CTTNBP2Q8WZ74 1663 aa13.66□□□□□ -0.22
FDFT1-221ENST00000532266 CHD1O14646 1710 aa13.62□□□□□ -0.23
FDFT1-221ENST00000532266 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
FDFT1-221ENST00000532266 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
FDFT1-221ENST00000532266 ARAP1Q96P48 1450 aa13.6□□□□□ -0.23
FDFT1-221ENST00000532266 IQGAP2Q13576 1575 aa13.58□□□□□ -0.23
FDFT1-221ENST00000532266 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
FDFT1-221ENST00000532266 NUP160Q12769 1436 aa13.57□□□□□ -0.24
FDFT1-221ENST00000532266 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
FDFT1-221ENST00000532266 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
FDFT1-221ENST00000532266 FHOD3Q2V2M9 1422 aa13.56□□□□□ -0.24
FDFT1-221ENST00000532266 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
FDFT1-221ENST00000532266 JPH4Q96JJ6 628 aa13.53□□□□□ -0.24
FDFT1-221ENST00000532266 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
FDFT1-221ENST00000532266 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
FDFT1-221ENST00000532266 EFCAB5A4FU69 1503 aa13.51□□□□□ -0.25
FDFT1-221ENST00000532266 SAMD9Q5K651 1589 aa13.5□□□□□ -0.25
FDFT1-221ENST00000532266 UGGT2Q9NYU1 1516 aa13.5□□□□□ -0.25
FDFT1-221ENST00000532266 APLP2Q06481 763 aa13.47□□□□□ -0.25
FDFT1-221ENST00000532266 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
FDFT1-221ENST00000532266 KIAA0556O60303 1618 aa13.46□□□□□ -0.26
FDFT1-221ENST00000532266 PRG4Q92954 1404 aaPredicted RBP13.45□□□□□ -0.26
FDFT1-221ENST00000532266 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
FDFT1-221ENST00000532266 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
FDFT1-221ENST00000532266 CARMIL2Q6F5E8 1435 aa13.43□□□□□ -0.26
FDFT1-221ENST00000532266 PCF11O94913 1555 aaKnown RBP13.42□□□□□ -0.26
FDFT1-221ENST00000532266 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
FDFT1-221ENST00000532266 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
FDFT1-221ENST00000532266 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
FDFT1-221ENST00000532266 SHROOM2Q13796 1616 aa13.39□□□□□ -0.27
FDFT1-221ENST00000532266 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
FDFT1-221ENST00000532266 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
FDFT1-221ENST00000532266 PTPRGP23470 1445 aa13.35□□□□□ -0.27
FDFT1-221ENST00000532266 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
FDFT1-221ENST00000532266 PLB1Q6P1J6 1458 aa13.33□□□□□ -0.28
FDFT1-221ENST00000532266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
FDFT1-221ENST00000532266 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
FDFT1-221ENST00000532266 RAPGEF6Q8TEU7 1601 aa13.31□□□□□ -0.28
FDFT1-221ENST00000532266 TIAM1Q13009 1591 aa13.31□□□□□ -0.28
FDFT1-221ENST00000532266 HECW1Q76N89 1606 aa13.31□□□□□ -0.28
FDFT1-221ENST00000532266 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
FDFT1-221ENST00000532266 PCGF6Q9BYE7 350 aa13.3□□□□□ -0.28
FDFT1-221ENST00000532266 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
FDFT1-221ENST00000532266 TRIM26Q12899 539 aaPredicted RBP13.29□□□□□ -0.28
FDFT1-221ENST00000532266 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
FDFT1-221ENST00000532266 NUP153P49790 1475 aaKnown RBP13.27□□□□□ -0.29
FDFT1-221ENST00000532266 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
FDFT1-221ENST00000532266 ABCA8O94911 1581 aa13.27□□□□□ -0.29
FDFT1-221ENST00000532266 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
FDFT1-221ENST00000532266 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
FDFT1-221ENST00000532266 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
FDFT1-221ENST00000532266 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
FDFT1-221ENST00000532266 MTUS2Q5JR59 1369 aa13.24□□□□□ -0.29
FDFT1-221ENST00000532266 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
FDFT1-221ENST00000532266 ATP10BO94823 1461 aa13.21□□□□□ -0.3
FDFT1-221ENST00000532266 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
FDFT1-221ENST00000532266 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
FDFT1-221ENST00000532266 CDK11AQ9UQ88 783 aaPredicted RBP13.18□□□□□ -0.3
FDFT1-221ENST00000532266 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
FDFT1-221ENST00000532266 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
FDFT1-221ENST00000532266 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
FDFT1-221ENST00000532266 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.3
FDFT1-221ENST00000532266 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.3
FDFT1-221ENST00000532266 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.3
FDFT1-221ENST00000532266 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
FDFT1-221ENST00000532266 UHRF1BP1LA0JNW5 1464 aa13.14□□□□□ -0.31
FDFT1-221ENST00000532266 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
FDFT1-221ENST00000532266 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
FDFT1-221ENST00000532266 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
FDFT1-221ENST00000532266 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
FDFT1-221ENST00000532266 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
FDFT1-221ENST00000532266 FAM50AQ14320 339 aaKnown RBP13.12□□□□□ -0.31
FDFT1-221ENST00000532266 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
FDFT1-221ENST00000532266 ITGAEP38570 1179 aa13.11□□□□□ -0.31
FDFT1-221ENST00000532266 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
FDFT1-221ENST00000532266 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
FDFT1-221ENST00000532266 KIF14Q15058 1648 aa13.1□□□□□ -0.31
FDFT1-221ENST00000532266 KDM5BQ9UGL1 1544 aa13.09□□□□□ -0.31
FDFT1-221ENST00000532266 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
FDFT1-221ENST00000532266 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
FDFT1-221ENST00000532266 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
FDFT1-221ENST00000532266 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
FDFT1-221ENST00000532266 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
FDFT1-221ENST00000532266 ASXL2Q76L83 1435 aa13.02□□□□□ -0.33
FDFT1-221ENST00000532266 ABCC10Q5T3U5 1492 aa13.02□□□□□ -0.33
FDFT1-221ENST00000532266 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
FDFT1-221ENST00000532266 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
FDFT1-221ENST00000532266 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
FDFT1-221ENST00000532266 PTPN23Q9H3S7 1636 aa13.01□□□□□ -0.33
FDFT1-221ENST00000532266 WDR7Q9Y4E6 1490 aa13□□□□□ -0.33
FDFT1-221ENST00000532266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.99□□□□□ -0.33
FDFT1-221ENST00000532266 TTC37Q6PGP7 1564 aa12.98□□□□□ -0.33
FDFT1-221ENST00000532266 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
FDFT1-221ENST00000532266 CDC42BPAQ5VT25 1732 aa12.97□□□□□ -0.33
FDFT1-221ENST00000532266 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
FDFT1-221ENST00000532266 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
FDFT1-221ENST00000532266 CHIC2Q9UKJ5 165 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms