RNA–Protein interactions for RNA: ENST00000532260.1

NDUFV1-222, Transcript of NADH:ubiquinone oxidoreductase core subunit V1, humanhuman

TSL 4

Gene NDUFV1, Length 574 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV1-222ENST00000532260 SHROOM2Q13796 1616 aa39.6■■■■□ 3.93
NDUFV1-222ENST00000532260 PRG4Q92954 1404 aaPredicted RBP39.53■■■■□ 3.92
NDUFV1-222ENST00000532260 KIAA0586Q9BVV6 1533 aa39.5■■■■□ 3.91
NDUFV1-222ENST00000532260 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
NDUFV1-222ENST00000532260 TRHP20396 242 aaPredicted RBP39.28■■■■□ 3.88
NDUFV1-222ENST00000532260 CHIC1Q5VXU3 224 aa39.2■■■■□ 3.87
NDUFV1-222ENST00000532260 PRXQ9BXM0 1461 aa39.19■■■■□ 3.86
NDUFV1-222ENST00000532260 CSRNP3Q8WYN3 585 aa39.17■■■■□ 3.86
NDUFV1-222ENST00000532260 IQGAP2Q13576 1575 aa39.16■■■■□ 3.86
NDUFV1-222ENST00000532260 TTBK1Q5TCY1 1321 aaPredicted RBP39.06■■■■□ 3.84
NDUFV1-222ENST00000532260 FAM9AQ8IZU1 332 aaPredicted RBP39.05■■■■□ 3.84
NDUFV1-222ENST00000532260 CARMIL2Q6F5E8 1435 aa39.05■■■■□ 3.84
NDUFV1-222ENST00000532260 PTPRGP23470 1445 aa39.03■■■■□ 3.84
NDUFV1-222ENST00000532260 DISP1Q96F81 1524 aa39.01■■■■□ 3.84
NDUFV1-222ENST00000532260 TNIKQ9UKE5 1360 aa39■■■■□ 3.83
NDUFV1-222ENST00000532260 UGGT2Q9NYU1 1516 aa38.99■■■■□ 3.83
NDUFV1-222ENST00000532260 EEA1Q15075 1411 aa38.98■■■■□ 3.83
NDUFV1-222ENST00000532260 ADCY10Q96PN6 1610 aa38.9■■■■□ 3.82
NDUFV1-222ENST00000532260 NPM1P06748 294 aaKnown RBP eCLIP38.89■■■■□ 3.82
NDUFV1-222ENST00000532260 CTTNBP2Q8WZ74 1663 aa38.85■■■■□ 3.81
NDUFV1-222ENST00000532260 KIAA0556O60303 1618 aa38.79■■■■□ 3.8
NDUFV1-222ENST00000532260 UACAQ9BZF9 1416 aa38.72■■■■□ 3.79
NDUFV1-222ENST00000532260 GOLGA3Q08378 1498 aa38.7■■■■□ 3.79
NDUFV1-222ENST00000532260 MAPKBP1O60336 1514 aa38.68■■■■□ 3.78
NDUFV1-222ENST00000532260 UHRF1BP1LA0JNW5 1464 aa38.67■■■■□ 3.78
NDUFV1-222ENST00000532260 P3H3Q8IVL6 736 aa38.66■■■■□ 3.78
NDUFV1-222ENST00000532260 ABCC2Q92887 1545 aa38.65■■■■□ 3.78
NDUFV1-222ENST00000532260 FAM69CQ0P6D2 419 aa38.63■■■■□ 3.77
NDUFV1-222ENST00000532260 EHMT2Q96KQ7 1210 aa38.62■■■■□ 3.77
NDUFV1-222ENST00000532260 ABCC10Q5T3U5 1492 aa38.6■■■■□ 3.77
NDUFV1-222ENST00000532260 KIF21BO75037 1637 aa38.59■■■■□ 3.77
NDUFV1-222ENST00000532260 RANGAP1P46060 587 aaPredicted RBP38.58■■■■□ 3.77
NDUFV1-222ENST00000532260 PLB1Q6P1J6 1458 aa38.56■■■■□ 3.76
NDUFV1-222ENST00000532260 KIF13AQ9H1H9 1805 aa38.55■■■■□ 3.76
NDUFV1-222ENST00000532260 KDM5BQ9UGL1 1544 aa38.5■■■■□ 3.75
NDUFV1-222ENST00000532260 ASXL2Q76L83 1435 aa38.49■■■■□ 3.75
NDUFV1-222ENST00000532260 DIP2BQ9P265 1576 aa38.47■■■■□ 3.75
NDUFV1-222ENST00000532260 UBTFP17480 764 aaKnown RBP38.45■■■■□ 3.75
NDUFV1-222ENST00000532260 ABCA8O94911 1581 aa38.44■■■■□ 3.74
NDUFV1-222ENST00000532260 SAMD9Q5K651 1589 aa38.44■■■■□ 3.74
NDUFV1-222ENST00000532260 ZCCHC11Q5TAX3 1644 aaKnown RBP38.37■■■■□ 3.73
NDUFV1-222ENST00000532260 FHOD3Q2V2M9 1422 aa38.32■■■■□ 3.73
NDUFV1-222ENST00000532260 ARID3CA6NKF2 412 aa38.31■■■■□ 3.72
NDUFV1-222ENST00000532260 EPRSP07814 1512 aaKnown RBP38.24■■■■□ 3.71
NDUFV1-222ENST00000532260 GLI2P10070 1586 aa38.21■■■■□ 3.71
NDUFV1-222ENST00000532260 ATP10BO94823 1461 aa38.21■■■■□ 3.71
NDUFV1-222ENST00000532260 WDR7Q9Y4E6 1490 aa38.19■■■■□ 3.7
NDUFV1-222ENST00000532260 EFCAB5A4FU69 1503 aa38.17■■■■□ 3.7
NDUFV1-222ENST00000532260 KCNH8Q96L42 1107 aa38.17■■■■□ 3.7
NDUFV1-222ENST00000532260 TSPOAP1O95153 1857 aa38.16■■■■□ 3.7
NDUFV1-222ENST00000532260 RAPGEF6Q8TEU7 1601 aa38.12■■■■□ 3.69
NDUFV1-222ENST00000532260 NUP153P49790 1475 aaKnown RBP38.08■■■■□ 3.69
NDUFV1-222ENST00000532260 ARHGAP35Q9NRY4 1499 aa38.08■■■■□ 3.69
NDUFV1-222ENST00000532260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.03■■■■□ 3.68
NDUFV1-222ENST00000532260 HNRNPUL2Q1KMD3 747 aaKnown RBP38.03■■■■□ 3.68
NDUFV1-222ENST00000532260 PPRC1Q5VV67 1664 aaKnown RBP38.02■■■■□ 3.68
NDUFV1-222ENST00000532260 MAP3K4Q9Y6R4 1608 aa38■■■■□ 3.67
NDUFV1-222ENST00000532260 CD109Q6YHK3 1445 aa37.93■■■■□ 3.66
NDUFV1-222ENST00000532260 KDM6BO15054 1643 aa37.91■■■■□ 3.66
NDUFV1-222ENST00000532260 FMN1Q68DA7 1419 aa37.88■■■■□ 3.66
NDUFV1-222ENST00000532260 ATP1B4Q9UN42 357 aaPredicted RBP37.87■■■■□ 3.65
NDUFV1-222ENST00000532260 COL17A1Q9UMD9 1497 aaPredicted RBP37.86■■■■□ 3.65
NDUFV1-222ENST00000532260 PLEKHD1A6NEE1 506 aa37.85■■■■□ 3.65
NDUFV1-222ENST00000532260 TEX14Q8IWB6 1497 aa37.84■■■■□ 3.65
NDUFV1-222ENST00000532260 MAGI3Q5TCQ9 1506 aa37.82■■■■□ 3.64
NDUFV1-222ENST00000532260 CFAP43Q8NDM7 1665 aa37.79■■■■□ 3.64
NDUFV1-222ENST00000532260 CDK13Q14004 1512 aaKnown RBP37.78■■■■□ 3.64
NDUFV1-222ENST00000532260 CLIP1P30622 1438 aa37.74■■■■□ 3.63
NDUFV1-222ENST00000532260 ABCA9Q8IUA7 1624 aa37.71■■■■□ 3.63
NDUFV1-222ENST00000532260 LOC105371045A0A1W2PR82 267 aa37.68■■■■□ 3.62
NDUFV1-222ENST00000532260 HECW1Q76N89 1606 aa37.67■■■■□ 3.62
NDUFV1-222ENST00000532260 CASKIN1Q8WXD9 1431 aa37.61■■■■□ 3.61
NDUFV1-222ENST00000532260 CDK11AQ9UQ88 783 aaPredicted RBP37.56■■■■□ 3.6
NDUFV1-222ENST00000532260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.56■■■■□ 3.63e-8■■■■■ 34
NDUFV1-222ENST00000532260 PCF11O94913 1555 aaKnown RBP37.54■■■■□ 3.6
NDUFV1-222ENST00000532260 LRRIQ1Q96JM4 1722 aa37.51■■■■□ 3.6
NDUFV1-222ENST00000532260 ARAP3Q8WWN8 1544 aa37.51■■■■□ 3.59
NDUFV1-222ENST00000532260 CEP162Q5TB80 1403 aa37.5■■■■□ 3.59
NDUFV1-222ENST00000532260 PHLDB1Q86UU1 1377 aa37.49■■■■□ 3.59
NDUFV1-222ENST00000532260 TTC37Q6PGP7 1564 aa37.47■■■■□ 3.59
NDUFV1-222ENST00000532260 AEBP2Q6ZN18 517 aaPredicted RBP37.47■■■■□ 3.59
NDUFV1-222ENST00000532260 NEO1Q92859 1461 aa37.46■■■■□ 3.59
NDUFV1-222ENST00000532260 TROQ12816 1431 aaPredicted RBP37.46■■■■□ 3.59
NDUFV1-222ENST00000532260 RAPGEF3O95398 923 aa37.45■■■■□ 3.59
NDUFV1-222ENST00000532260 FYCO1Q9BQS8 1478 aa37.43■■■■□ 3.58
NDUFV1-222ENST00000532260 KDM4FA0A1W2PPD8 638 aa37.42■■■■□ 3.58
NDUFV1-222ENST00000532260 CCDC18Q5T9S5 1454 aa37.39■■■■□ 3.58
NDUFV1-222ENST00000532260 PLCH2O75038 1416 aa37.37■■■■□ 3.57
NDUFV1-222ENST00000532260 AKNAQ7Z591 1439 aa37.37■■■■□ 3.57
NDUFV1-222ENST00000532260 KIF14Q15058 1648 aa37.37■■■■□ 3.57
NDUFV1-222ENST00000532260 FANCAO15360 1455 aa37.37■■■■□ 3.57
NDUFV1-222ENST00000532260 EFCAB2Q5VUJ9 269 aa37.26■■■■□ 3.56
NDUFV1-222ENST00000532260 DENND4BO75064 1496 aaPredicted RBP37.24■■■■□ 3.55
NDUFV1-222ENST00000532260 FRMPD1Q5SYB0 1578 aa37.23■■■■□ 3.55
NDUFV1-222ENST00000532260 CFAP74Q9C0B2 1584 aa37.19■■■■□ 3.54
NDUFV1-222ENST00000532260 SCAPERQ9BY12 1400 aa37.18■■■■□ 3.54
NDUFV1-222ENST00000532260 ADGRL1O94910 1474 aa37.17■■■■□ 3.54
NDUFV1-222ENST00000532260 MYO5CQ9NQX4 1742 aa37.16■■■■□ 3.54
NDUFV1-222ENST00000532260 ARHGAP5Q13017 1502 aa37.11■■■■□ 3.53
NDUFV1-222ENST00000532260 RICTORQ6R327 1708 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms