RNA–Protein interactions for RNA: ENST00000532249.1

SOX9-AS1-209, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-209ENST00000532249 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-209ENST00000532249 TRIM41Q8WV44 630 aa9.33□□□□□ -0.92
SOX9-AS1-209ENST00000532249 EEA1Q15075 1411 aa9.32□□□□□ -0.92
SOX9-AS1-209ENST00000532249 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
SOX9-AS1-209ENST00000532249 CNKSR2Q8WXI2 1034 aa9.29□□□□□ -0.92
SOX9-AS1-209ENST00000532249 GRIN2AQ12879 1464 aa9.28□□□□□ -0.92
SOX9-AS1-209ENST00000532249 OSCARQ8IYS5 282 aa9.27□□□□□ -0.93
SOX9-AS1-209ENST00000532249 CHMP7Q8WUX9 453 aaPredicted RBP9.27□□□□□ -0.93
SOX9-AS1-209ENST00000532249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.93
SOX9-AS1-209ENST00000532249 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
SOX9-AS1-209ENST00000532249 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
SOX9-AS1-209ENST00000532249 IGF1RP08069 1367 aa9.23□□□□□ -0.93
SOX9-AS1-209ENST00000532249 CTTNBP2Q8WZ74 1663 aa9.23□□□□□ -0.93
SOX9-AS1-209ENST00000532249 NUP160Q12769 1436 aa9.22□□□□□ -0.93
SOX9-AS1-209ENST00000532249 FBLN2P98095 1184 aa9.22□□□□□ -0.93
SOX9-AS1-209ENST00000532249 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
SOX9-AS1-209ENST00000532249 RUSC2Q8N2Y8 1516 aa9.21□□□□□ -0.93
SOX9-AS1-209ENST00000532249 CEP170Q5SW79 1584 aa9.21□□□□□ -0.93
SOX9-AS1-209ENST00000532249 CARMIL1Q5VZK9 1371 aa9.21□□□□□ -0.94
SOX9-AS1-209ENST00000532249 SHROOM2Q13796 1616 aa9.2□□□□□ -0.94
SOX9-AS1-209ENST00000532249 KIF21BO75037 1637 aa9.2□□□□□ -0.94
SOX9-AS1-209ENST00000532249 PRXQ9BXM0 1461 aa9.18□□□□□ -0.94
SOX9-AS1-209ENST00000532249 IQGAP2Q13576 1575 aa9.17□□□□□ -0.94
SOX9-AS1-209ENST00000532249 KIAA0586Q9BVV6 1533 aa9.17□□□□□ -0.94
SOX9-AS1-209ENST00000532249 NCBP3Q53F19 620 aaKnown RBP9.16□□□□□ -0.94
SOX9-AS1-209ENST00000532249 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
SOX9-AS1-209ENST00000532249 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
SOX9-AS1-209ENST00000532249 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
SOX9-AS1-209ENST00000532249 ARHGEF11O15085 1522 aa9.15□□□□□ -0.94
SOX9-AS1-209ENST00000532249 CSRNP3Q8WYN3 585 aa9.14□□□□□ -0.95
SOX9-AS1-209ENST00000532249 ERCC6L2Q5T890 1561 aa9.13□□□□□ -0.95
SOX9-AS1-209ENST00000532249 GOLGA3Q08378 1498 aa9.11□□□□□ -0.95
SOX9-AS1-209ENST00000532249 CARMIL2Q6F5E8 1435 aa9.11□□□□□ -0.95
SOX9-AS1-209ENST00000532249 UGGT2Q9NYU1 1516 aa9.1□□□□□ -0.95
SOX9-AS1-209ENST00000532249 DSG3P32926 999 aa9.1□□□□□ -0.95
SOX9-AS1-209ENST00000532249 NPM3O75607 178 aaKnown RBP9.09□□□□□ -0.95
SOX9-AS1-209ENST00000532249 CAPN15O75808 1086 aa9.08□□□□□ -0.96
SOX9-AS1-209ENST00000532249 KCNA4P22459 653 aa9.08□□□□□ -0.96
SOX9-AS1-209ENST00000532249 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
SOX9-AS1-209ENST00000532249 KIAA0556O60303 1618 aa9.07□□□□□ -0.96
SOX9-AS1-209ENST00000532249 FAM9AQ8IZU1 332 aaPredicted RBP9.07□□□□□ -0.96
SOX9-AS1-209ENST00000532249 JPH4Q96JJ6 628 aa9.07□□□□□ -0.96
SOX9-AS1-209ENST00000532249 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
SOX9-AS1-209ENST00000532249 PRG4Q92954 1404 aaPredicted RBP9.06□□□□□ -0.96
SOX9-AS1-209ENST00000532249 SAMD9Q5K651 1589 aa9.05□□□□□ -0.96
SOX9-AS1-209ENST00000532249 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
SOX9-AS1-209ENST00000532249 DISP1Q96F81 1524 aa9.02□□□□□ -0.97
SOX9-AS1-209ENST00000532249 EHMT2Q96KQ7 1210 aa9.02□□□□□ -0.97
SOX9-AS1-209ENST00000532249 PTPRGP23470 1445 aa8.98□□□□□ -0.97
SOX9-AS1-209ENST00000532249 UHRF1BP1LA0JNW5 1464 aa8.98□□□□□ -0.97
SOX9-AS1-209ENST00000532249 UBTFP17480 764 aaKnown RBP8.98□□□□□ -0.97
SOX9-AS1-209ENST00000532249 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
SOX9-AS1-209ENST00000532249 ABCC2Q92887 1545 aa8.97□□□□□ -0.97
SOX9-AS1-209ENST00000532249 ADCY10Q96PN6 1610 aa8.97□□□□□ -0.97
SOX9-AS1-209ENST00000532249 SPINK5Q9NQ38 1064 aaPredicted RBP8.96□□□□□ -0.98
SOX9-AS1-209ENST00000532249 TTBK1Q5TCY1 1321 aaPredicted RBP8.96□□□□□ -0.98
SOX9-AS1-209ENST00000532249 FMN1Q68DA7 1419 aa8.96□□□□□ -0.98
SOX9-AS1-209ENST00000532249 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
SOX9-AS1-209ENST00000532249 UACAQ9BZF9 1416 aa8.95□□□□□ -0.98
SOX9-AS1-209ENST00000532249 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
SOX9-AS1-209ENST00000532249 ABCA8O94911 1581 aa8.94□□□□□ -0.98
SOX9-AS1-209ENST00000532249 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
SOX9-AS1-209ENST00000532249 HECW1Q76N89 1606 aa8.93□□□□□ -0.98
SOX9-AS1-209ENST00000532249 ZCCHC11Q5TAX3 1644 aaKnown RBP8.91□□□□□ -0.98
SOX9-AS1-209ENST00000532249 KDM5BQ9UGL1 1544 aa8.91□□□□□ -0.98
SOX9-AS1-209ENST00000532249 SP7Q8TDD2 431 aaPredicted RBP8.91□□□□□ -0.98
SOX9-AS1-209ENST00000532249 ARHGAP35Q9NRY4 1499 aa8.9□□□□□ -0.98
SOX9-AS1-209ENST00000532249 CLIP1P30622 1438 aa8.9□□□□□ -0.98
SOX9-AS1-209ENST00000532249 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
SOX9-AS1-209ENST00000532249 PLB1Q6P1J6 1458 aa8.89□□□□□ -0.99
SOX9-AS1-209ENST00000532249 FHOD3Q2V2M9 1422 aa8.88□□□□□ -0.99
SOX9-AS1-209ENST00000532249 CCDC18Q5T9S5 1454 aa8.88□□□□□ -0.99
SOX9-AS1-209ENST00000532249 FYCO1Q9BQS8 1478 aa8.88□□□□□ -0.99
SOX9-AS1-209ENST00000532249 CEP162Q5TB80 1403 aa8.88□□□□□ -0.99
SOX9-AS1-209ENST00000532249 KIF13AQ9H1H9 1805 aa8.87□□□□□ -0.99
SOX9-AS1-209ENST00000532249 P3H3Q8IVL6 736 aa8.85□□□□□ -0.99
SOX9-AS1-209ENST00000532249 U3KPZ7 1027 aaPredicted RBP8.85□□□□□ -0.99
SOX9-AS1-209ENST00000532249 GLI2P10070 1586 aa8.85□□□□□ -0.99
SOX9-AS1-209ENST00000532249 DIP2BQ9P265 1576 aa8.85□□□□□ -0.99
SOX9-AS1-209ENST00000532249 CFAP43Q8NDM7 1665 aa8.85□□□□□ -0.99
SOX9-AS1-209ENST00000532249 ABCC10Q5T3U5 1492 aa8.84□□□□□ -0.99
SOX9-AS1-209ENST00000532249 WDR7Q9Y4E6 1490 aa8.84□□□□□ -0.99
SOX9-AS1-209ENST00000532249 PCF11O94913 1555 aaKnown RBP8.84□□□□□ -0.99
SOX9-AS1-209ENST00000532249 CHRDL2Q6WN34 429 aa8.84□□□□□ -0.99
SOX9-AS1-209ENST00000532249 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
SOX9-AS1-209ENST00000532249 NUP153P49790 1475 aaKnown RBP8.83□□□□□ -1
SOX9-AS1-209ENST00000532249 ASXL2Q76L83 1435 aa8.83□□□□□ -1
SOX9-AS1-209ENST00000532249 ARID3CA6NKF2 412 aa8.83□□□□□ -1
SOX9-AS1-209ENST00000532249 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
SOX9-AS1-209ENST00000532249 EPRSP07814 1512 aaKnown RBP8.81□□□□□ -1
SOX9-AS1-209ENST00000532249 MAP3K4Q9Y6R4 1608 aa8.81□□□□□ -1
SOX9-AS1-209ENST00000532249 CFAP74Q9C0B2 1584 aa8.81□□□□□ -1
SOX9-AS1-209ENST00000532249 KIF14Q15058 1648 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 ATP10BO94823 1461 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 ABCA9Q8IUA7 1624 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 VPS8Q8N3P4 1428 aa8.8□□□□□ -1
SOX9-AS1-209ENST00000532249 TSPOAP1O95153 1857 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms