RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 KIF21BO75037 1637 aa26.91■■□□□ 1.9
LRFN4-203ENST00000531590 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
LRFN4-203ENST00000531590 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
LRFN4-203ENST00000531590 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
LRFN4-203ENST00000531590 RIMBP3CA6NJZ7 1639 aa26.84■■□□□ 1.89
LRFN4-203ENST00000531590 RIMBP3BA6NNM3 1639 aa26.84■■□□□ 1.89
LRFN4-203ENST00000531590 RIMBP3Q9UFD9 1639 aa26.84■■□□□ 1.89
LRFN4-203ENST00000531590 IQGAP2Q13576 1575 aa26.84■■□□□ 1.89
LRFN4-203ENST00000531590 ERCC6L2Q5T890 1561 aa26.83■■□□□ 1.89
LRFN4-203ENST00000531590 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
LRFN4-203ENST00000531590 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
LRFN4-203ENST00000531590 ARAP1Q96P48 1450 aa26.75■■□□□ 1.87
LRFN4-203ENST00000531590 CTTNBP2Q8WZ74 1663 aa26.74■■□□□ 1.87
LRFN4-203ENST00000531590 UGGT2Q9NYU1 1516 aa26.74■■□□□ 1.87
LRFN4-203ENST00000531590 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
LRFN4-203ENST00000531590 DISP1Q96F81 1524 aa26.69■■□□□ 1.86
LRFN4-203ENST00000531590 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
LRFN4-203ENST00000531590 CARMIL2Q6F5E8 1435 aa26.65■■□□□ 1.86
LRFN4-203ENST00000531590 RANGAP1P46060 587 aaPredicted RBP26.61■■□□□ 1.85
LRFN4-203ENST00000531590 KIAA0556O60303 1618 aa26.6■■□□□ 1.85
LRFN4-203ENST00000531590 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.84
LRFN4-203ENST00000531590 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
LRFN4-203ENST00000531590 TTBK1Q5TCY1 1321 aaPredicted RBP26.54■■□□□ 1.84
LRFN4-203ENST00000531590 PTPRGP23470 1445 aa26.54■■□□□ 1.84
LRFN4-203ENST00000531590 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
LRFN4-203ENST00000531590 SAMD9Q5K651 1589 aa26.52■■□□□ 1.84
LRFN4-203ENST00000531590 EFCAB5A4FU69 1503 aa26.45■■□□□ 1.83
LRFN4-203ENST00000531590 FHOD3Q2V2M9 1422 aa26.45■■□□□ 1.82
LRFN4-203ENST00000531590 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
LRFN4-203ENST00000531590 UACAQ9BZF9 1416 aa26.37■■□□□ 1.81
LRFN4-203ENST00000531590 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
LRFN4-203ENST00000531590 CLIP1P30622 1438 aa26.36■■□□□ 1.81
LRFN4-203ENST00000531590 ADCY10Q96PN6 1610 aa26.34■■□□□ 1.81
LRFN4-203ENST00000531590 CEP162Q5TB80 1403 aa26.33■■□□□ 1.81
LRFN4-203ENST00000531590 UHRF1BP1LA0JNW5 1464 aa26.31■■□□□ 1.8
LRFN4-203ENST00000531590 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
LRFN4-203ENST00000531590 ABCA8O94911 1581 aa26.3■■□□□ 1.8
LRFN4-203ENST00000531590 FMN1Q68DA7 1419 aa26.22■■□□□ 1.79
LRFN4-203ENST00000531590 NPM1P06748 294 aaKnown RBP eCLIP26.2■■□□□ 1.78
LRFN4-203ENST00000531590 KDM5BQ9UGL1 1544 aa26.19■■□□□ 1.78
LRFN4-203ENST00000531590 RAPGEF6Q8TEU7 1601 aa26.18■■□□□ 1.78
LRFN4-203ENST00000531590 NUP153P49790 1475 aaKnown RBP26.17■■□□□ 1.78
LRFN4-203ENST00000531590 ARID3CA6NKF2 412 aa26.16■■□□□ 1.78
LRFN4-203ENST00000531590 ATP10BO94823 1461 aa26.11■■□□□ 1.77
LRFN4-203ENST00000531590 MAPKBP1O60336 1514 aa26.11■■□□□ 1.77
LRFN4-203ENST00000531590 ZCCHC11Q5TAX3 1644 aaKnown RBP26.1■■□□□ 1.77
LRFN4-203ENST00000531590 CASKIN1Q8WXD9 1431 aa26.07■■□□□ 1.76
LRFN4-203ENST00000531590 ATP1B4Q9UN42 357 aaPredicted RBP26.07■■□□□ 1.76
LRFN4-203ENST00000531590 PCF11O94913 1555 aaKnown RBP26.07■■□□□ 1.76
LRFN4-203ENST00000531590 ASXL2Q76L83 1435 aa26.06■■□□□ 1.76
LRFN4-203ENST00000531590 HECW1Q76N89 1606 aa26.03■■□□□ 1.76
LRFN4-203ENST00000531590 EPRSP07814 1512 aaKnown RBP26.01■■□□□ 1.75
LRFN4-203ENST00000531590 CDK13Q14004 1512 aaKnown RBP26■■□□□ 1.75
LRFN4-203ENST00000531590 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
LRFN4-203ENST00000531590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
LRFN4-203ENST00000531590 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
LRFN4-203ENST00000531590 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
LRFN4-203ENST00000531590 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
LRFN4-203ENST00000531590 ABCC10Q5T3U5 1492 aa25.98■■□□□ 1.75
LRFN4-203ENST00000531590 WDR7Q9Y4E6 1490 aa25.98■■□□□ 1.75
LRFN4-203ENST00000531590 DIP2BQ9P265 1576 aa25.92■■□□□ 1.74
LRFN4-203ENST00000531590 FAM69CQ0P6D2 419 aa25.92■■□□□ 1.74
LRFN4-203ENST00000531590 CCDC18Q5T9S5 1454 aa25.9■■□□□ 1.74
LRFN4-203ENST00000531590 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
LRFN4-203ENST00000531590 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
LRFN4-203ENST00000531590 PLEKHD1A6NEE1 506 aa25.87■■□□□ 1.73
LRFN4-203ENST00000531590 GLI2P10070 1586 aa25.83■■□□□ 1.73
LRFN4-203ENST00000531590 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
LRFN4-203ENST00000531590 MAGI3Q5TCQ9 1506 aa25.81■■□□□ 1.72
LRFN4-203ENST00000531590 KIF13AQ9H1H9 1805 aa25.8■■□□□ 1.72
LRFN4-203ENST00000531590 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
LRFN4-203ENST00000531590 TIAM1Q13009 1591 aa25.71■■□□□ 1.71
LRFN4-203ENST00000531590 CD109Q6YHK3 1445 aa25.71■■□□□ 1.71
LRFN4-203ENST00000531590 MAP3K4Q9Y6R4 1608 aa25.7■■□□□ 1.71
LRFN4-203ENST00000531590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.72e-6■■■■■ 51.7
LRFN4-203ENST00000531590 ABCA9Q8IUA7 1624 aa25.7■■□□□ 1.7
LRFN4-203ENST00000531590 KIF14Q15058 1648 aa25.69■■□□□ 1.7
LRFN4-203ENST00000531590 MTUS2Q5JR59 1369 aa25.69■■□□□ 1.7
LRFN4-203ENST00000531590 CFAP43Q8NDM7 1665 aa25.68■■□□□ 1.7
LRFN4-203ENST00000531590 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
LRFN4-203ENST00000531590 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
LRFN4-203ENST00000531590 KANK4Q5T7N3 995 aaPredicted RBP25.65■■□□□ 1.7
LRFN4-203ENST00000531590 EHBP1L1Q8N3D4 1523 aa25.63■■□□□ 1.69
LRFN4-203ENST00000531590 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
LRFN4-203ENST00000531590 PPRC1Q5VV67 1664 aaKnown RBP25.62■■□□□ 1.69
LRFN4-203ENST00000531590 APLP2Q06481 763 aa25.61■■□□□ 1.69
LRFN4-203ENST00000531590 TEX14Q8IWB6 1497 aa25.57■■□□□ 1.68
LRFN4-203ENST00000531590 PLCH2O75038 1416 aa25.56■■□□□ 1.68
LRFN4-203ENST00000531590 TSPOAP1O95153 1857 aa25.56■■□□□ 1.68
LRFN4-203ENST00000531590 NCOA2Q15596 1464 aa25.52■■□□□ 1.68
LRFN4-203ENST00000531590 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
LRFN4-203ENST00000531590 FANCAO15360 1455 aa25.49■■□□□ 1.67
LRFN4-203ENST00000531590 CCNB3Q8WWL7 1395 aa25.48■■□□□ 1.67
LRFN4-203ENST00000531590 ARAP3Q8WWN8 1544 aa25.47■■□□□ 1.67
LRFN4-203ENST00000531590 COL17A1Q9UMD9 1497 aaPredicted RBP25.47■■□□□ 1.67
LRFN4-203ENST00000531590 NEO1Q92859 1461 aa25.47■■□□□ 1.67
LRFN4-203ENST00000531590 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
LRFN4-203ENST00000531590 SUPT6HQ7KZ85 1726 aaKnown RBP25.45■■□□□ 1.66
LRFN4-203ENST00000531590 MYO5CQ9NQX4 1742 aa25.44■■□□□ 1.66
LRFN4-203ENST00000531590 EFCAB2Q5VUJ9 269 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms