RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 CUL7Q14999 1698 aa22.64■■□□□ 1.21
SF3B2-212ENST00000531589 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
SF3B2-212ENST00000531589 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
SF3B2-212ENST00000531589 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
SF3B2-212ENST00000531589 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
SF3B2-212ENST00000531589 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
SF3B2-212ENST00000531589 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.17
SF3B2-212ENST00000531589 PTPRGP23470 1445 aa22.37■■□□□ 1.17
SF3B2-212ENST00000531589 IQGAP2Q13576 1575 aa22.37■■□□□ 1.17
SF3B2-212ENST00000531589 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.17
SF3B2-212ENST00000531589 MAPKBP1O60336 1514 aa22.31■■□□□ 1.16
SF3B2-212ENST00000531589 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
SF3B2-212ENST00000531589 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
SF3B2-212ENST00000531589 TTBK1Q5TCY1 1321 aaPredicted RBP22.29■■□□□ 1.16
SF3B2-212ENST00000531589 ABCC10Q5T3U5 1492 aa22.28■■□□□ 1.16
SF3B2-212ENST00000531589 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
SF3B2-212ENST00000531589 UGGT2Q9NYU1 1516 aa22.24■■□□□ 1.15
SF3B2-212ENST00000531589 DISP1Q96F81 1524 aa22.22■■□□□ 1.15
SF3B2-212ENST00000531589 ABCC2Q92887 1545 aa22.2■■□□□ 1.14
SF3B2-212ENST00000531589 DIP2BQ9P265 1576 aa22.18■■□□□ 1.14
SF3B2-212ENST00000531589 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
SF3B2-212ENST00000531589 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
SF3B2-212ENST00000531589 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
SF3B2-212ENST00000531589 KIAA0556O60303 1618 aa22.13■■□□□ 1.13
SF3B2-212ENST00000531589 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
SF3B2-212ENST00000531589 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
SF3B2-212ENST00000531589 PLB1Q6P1J6 1458 aa22.12■■□□□ 1.13
SF3B2-212ENST00000531589 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
SF3B2-212ENST00000531589 ASXL2Q76L83 1435 aa22.09■■□□□ 1.13
SF3B2-212ENST00000531589 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
SF3B2-212ENST00000531589 FAM9AQ8IZU1 332 aaPredicted RBP22.08■■□□□ 1.13
SF3B2-212ENST00000531589 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
SF3B2-212ENST00000531589 EEA1Q15075 1411 aa22.06■■□□□ 1.12
SF3B2-212ENST00000531589 GLI2P10070 1586 aa22.01■■□□□ 1.11
SF3B2-212ENST00000531589 KDM6BO15054 1643 aa21.98■■□□□ 1.11
SF3B2-212ENST00000531589 TSPOAP1O95153 1857 aa21.97■■□□□ 1.11
SF3B2-212ENST00000531589 ZCCHC11Q5TAX3 1644 aaKnown RBP21.97■■□□□ 1.11
SF3B2-212ENST00000531589 EPRSP07814 1512 aaKnown RBP21.96■■□□□ 1.11
SF3B2-212ENST00000531589 ABCA8O94911 1581 aa21.92■■□□□ 1.1
SF3B2-212ENST00000531589 WDR7Q9Y4E6 1490 aa21.91■■□□□ 1.1
SF3B2-212ENST00000531589 P3H3Q8IVL6 736 aa21.9■■□□□ 1.1
SF3B2-212ENST00000531589 TEX14Q8IWB6 1497 aa21.88■■□□□ 1.09
SF3B2-212ENST00000531589 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
SF3B2-212ENST00000531589 SAMD9Q5K651 1589 aa21.83■■□□□ 1.09
SF3B2-212ENST00000531589 PPRC1Q5VV67 1664 aaKnown RBP21.83■■□□□ 1.09
SF3B2-212ENST00000531589 KCNH8Q96L42 1107 aa21.83■■□□□ 1.09
SF3B2-212ENST00000531589 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
SF3B2-212ENST00000531589 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
SF3B2-212ENST00000531589 KIF21BO75037 1637 aa21.79■■□□□ 1.08
SF3B2-212ENST00000531589 CD109Q6YHK3 1445 aa21.78■■□□□ 1.08
SF3B2-212ENST00000531589 ATP10BO94823 1461 aa21.77■■□□□ 1.08
SF3B2-212ENST00000531589 ARID3CA6NKF2 412 aa21.76■■□□□ 1.07
SF3B2-212ENST00000531589 CFAP43Q8NDM7 1665 aa21.75■■□□□ 1.07
SF3B2-212ENST00000531589 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
SF3B2-212ENST00000531589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
SF3B2-212ENST00000531589 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
SF3B2-212ENST00000531589 RAPGEF6Q8TEU7 1601 aa21.73■■□□□ 1.07
SF3B2-212ENST00000531589 COL17A1Q9UMD9 1497 aaPredicted RBP21.72■■□□□ 1.07
SF3B2-212ENST00000531589 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
SF3B2-212ENST00000531589 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
SF3B2-212ENST00000531589 EFCAB5A4FU69 1503 aa21.7■■□□□ 1.07
SF3B2-212ENST00000531589 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
SF3B2-212ENST00000531589 NUP153P49790 1475 aaKnown RBP21.65■■□□□ 1.06
SF3B2-212ENST00000531589 PLEKHD1A6NEE1 506 aa21.63■■□□□ 1.05
SF3B2-212ENST00000531589 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
SF3B2-212ENST00000531589 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
SF3B2-212ENST00000531589 ABCA9Q8IUA7 1624 aa21.61■■□□□ 1.05
SF3B2-212ENST00000531589 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.04
SF3B2-212ENST00000531589 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
SF3B2-212ENST00000531589 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
SF3B2-212ENST00000531589 NEO1Q92859 1461 aa21.54■■□□□ 1.04
SF3B2-212ENST00000531589 ATP1B4Q9UN42 357 aaPredicted RBP21.5■■□□□ 1.03
SF3B2-212ENST00000531589 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
SF3B2-212ENST00000531589 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
SF3B2-212ENST00000531589 HECW1Q76N89 1606 aa21.44■■□□□ 1.02
SF3B2-212ENST00000531589 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
SF3B2-212ENST00000531589 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
SF3B2-212ENST00000531589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.42■■□□□ 1.02
SF3B2-212ENST00000531589 FANCAO15360 1455 aa21.4■■□□□ 1.02
SF3B2-212ENST00000531589 CFAP74Q9C0B2 1584 aa21.4■■□□□ 1.02
SF3B2-212ENST00000531589 AKNAQ7Z591 1439 aa21.39■■□□□ 1.02
SF3B2-212ENST00000531589 DENND4BO75064 1496 aaPredicted RBP21.38■■□□□ 1.01
SF3B2-212ENST00000531589 TTC37Q6PGP7 1564 aa21.36■■□□□ 1.01
SF3B2-212ENST00000531589 PLCH2O75038 1416 aa21.35■■□□□ 1.01
SF3B2-212ENST00000531589 CLIP1P30622 1438 aa21.32■■□□□ 1
SF3B2-212ENST00000531589 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
SF3B2-212ENST00000531589 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
SF3B2-212ENST00000531589 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
SF3B2-212ENST00000531589 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
SF3B2-212ENST00000531589 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
SF3B2-212ENST00000531589 CCDC18Q5T9S5 1454 aa21.28■■□□□ 1
SF3B2-212ENST00000531589 KIF14Q15058 1648 aa21.28■■□□□ 1
SF3B2-212ENST00000531589 RICTORQ6R327 1708 aa21.26■□□□□ 0.99
SF3B2-212ENST00000531589 SCAPERQ9BY12 1400 aa21.26■□□□□ 0.99
SF3B2-212ENST00000531589 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
SF3B2-212ENST00000531589 ZMYM4Q5VZL5 1548 aa21.24■□□□□ 0.99
SF3B2-212ENST00000531589 ARHGEF40Q8TER5 1519 aa21.24■□□□□ 0.99
SF3B2-212ENST00000531589 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
SF3B2-212ENST00000531589 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
SF3B2-212ENST00000531589 POGZQ7Z3K3 1410 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms