RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 GOLGA3Q08378 1498 aa29.64■■■□□ 2.34
SIPA1-207ENST00000531339 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
SIPA1-207ENST00000531339 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
SIPA1-207ENST00000531339 RAPGEF2Q9Y4G8 1499 aa29.6■■■□□ 2.33
SIPA1-207ENST00000531339 ILDR1Q86SU0 546 aaPredicted RBP29.59■■■□□ 2.33
SIPA1-207ENST00000531339 FHAD1B1AJZ9 1412 aa29.56■■■□□ 2.32
SIPA1-207ENST00000531339 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
SIPA1-207ENST00000531339 ADAMTS12P58397 1594 aa29.54■■■□□ 2.32
SIPA1-207ENST00000531339 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
SIPA1-207ENST00000531339 UBTFP17480 764 aaKnown RBP29.51■■■□□ 2.31
SIPA1-207ENST00000531339 KIF13AQ9H1H9 1805 aa29.47■■■□□ 2.31
SIPA1-207ENST00000531339 TNIKQ9UKE5 1360 aa29.45■■■□□ 2.31
SIPA1-207ENST00000531339 GRIN2AQ12879 1464 aa29.34■■■□□ 2.29
SIPA1-207ENST00000531339 KDM4FA0A1W2PPD8 638 aa29.31■■■□□ 2.28
SIPA1-207ENST00000531339 CEP170Q5SW79 1584 aa29.26■■■□□ 2.28
SIPA1-207ENST00000531339 CTTNBP2Q8WZ74 1663 aa29.24■■■□□ 2.27
SIPA1-207ENST00000531339 CEP162Q5TB80 1403 aa29.21■■■□□ 2.27
SIPA1-207ENST00000531339 NUP160Q12769 1436 aa29.16■■■□□ 2.26
SIPA1-207ENST00000531339 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
SIPA1-207ENST00000531339 KIAA0586Q9BVV6 1533 aa29.14■■■□□ 2.25
SIPA1-207ENST00000531339 CLIP1P30622 1438 aa29.13■■■□□ 2.25
SIPA1-207ENST00000531339 RANGAP1P46060 587 aaPredicted RBP29.1■■■□□ 2.25
SIPA1-207ENST00000531339 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
SIPA1-207ENST00000531339 FAM69CQ0P6D2 419 aa29.07■■■□□ 2.24
SIPA1-207ENST00000531339 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
SIPA1-207ENST00000531339 KDM6BO15054 1643 aa29.01■■■□□ 2.23
SIPA1-207ENST00000531339 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
SIPA1-207ENST00000531339 EFCAB5A4FU69 1503 aa28.98■■■□□ 2.23
SIPA1-207ENST00000531339 UGGT2Q9NYU1 1516 aa28.97■■■□□ 2.23
SIPA1-207ENST00000531339 ARHGAP35Q9NRY4 1499 aa28.97■■■□□ 2.23
SIPA1-207ENST00000531339 JPH4Q96JJ6 628 aa28.92■■■□□ 2.22
SIPA1-207ENST00000531339 MAPKBP1O60336 1514 aa28.91■■■□□ 2.22
SIPA1-207ENST00000531339 PRG4Q92954 1404 aaPredicted RBP28.91■■■□□ 2.22
SIPA1-207ENST00000531339 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
SIPA1-207ENST00000531339 TSPOAP1O95153 1857 aa28.89■■■□□ 2.21
SIPA1-207ENST00000531339 P3H3Q8IVL6 736 aa28.85■■■□□ 2.21
SIPA1-207ENST00000531339 DISP1Q96F81 1524 aa28.82■■■□□ 2.2
SIPA1-207ENST00000531339 ADCY10Q96PN6 1610 aa28.81■■■□□ 2.2
SIPA1-207ENST00000531339 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
SIPA1-207ENST00000531339 CARMIL2Q6F5E8 1435 aa28.81■■■□□ 2.2
SIPA1-207ENST00000531339 VPS8Q8N3P4 1428 aa28.8■■■□□ 2.2
SIPA1-207ENST00000531339 KIAA0556O60303 1618 aa28.79■■■□□ 2.2
SIPA1-207ENST00000531339 HECW2Q9P2P5 1572 aa28.76■■■□□ 2.19
SIPA1-207ENST00000531339 NPM1P06748 294 aaKnown RBP eCLIP28.76■■■□□ 2.19
SIPA1-207ENST00000531339 ADGRL1O94910 1474 aa28.75■■■□□ 2.19
SIPA1-207ENST00000531339 FMN1Q68DA7 1419 aa28.71■■■□□ 2.19
SIPA1-207ENST00000531339 CASKIN1Q8WXD9 1431 aa28.59■■■□□ 2.17
SIPA1-207ENST00000531339 PPRC1Q5VV67 1664 aaKnown RBP28.58■■■□□ 2.17
SIPA1-207ENST00000531339 FYCO1Q9BQS8 1478 aa28.57■■■□□ 2.16
SIPA1-207ENST00000531339 PCF11O94913 1555 aaKnown RBP28.57■■■□□ 2.16
SIPA1-207ENST00000531339 TTBK1Q5TCY1 1321 aaPredicted RBP28.56■■■□□ 2.16
SIPA1-207ENST00000531339 PTPRGP23470 1445 aa28.55■■■□□ 2.16
SIPA1-207ENST00000531339 APLP2Q06481 763 aa28.54■■■□□ 2.16
SIPA1-207ENST00000531339 ATP1B4Q9UN42 357 aaPredicted RBP28.5■■■□□ 2.15
SIPA1-207ENST00000531339 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
SIPA1-207ENST00000531339 RAPGEF6Q8TEU7 1601 aa28.46■■■□□ 2.15
SIPA1-207ENST00000531339 HECW1Q76N89 1606 aa28.45■■■□□ 2.14
SIPA1-207ENST00000531339 FBXO41Q8TF61 875 aa28.44■■■□□ 2.14
SIPA1-207ENST00000531339 ABCA8O94911 1581 aa28.43■■■□□ 2.14
SIPA1-207ENST00000531339 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
SIPA1-207ENST00000531339 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
SIPA1-207ENST00000531339 GLI2P10070 1586 aa28.38■■■□□ 2.13
SIPA1-207ENST00000531339 UACAQ9BZF9 1416 aa28.38■■■□□ 2.13
SIPA1-207ENST00000531339 TIAM1Q13009 1591 aa28.37■■■□□ 2.13
SIPA1-207ENST00000531339 CCDC18Q5T9S5 1454 aa28.37■■■□□ 2.13
SIPA1-207ENST00000531339 NUP153P49790 1475 aaKnown RBP28.36■■■□□ 2.13
SIPA1-207ENST00000531339 CFAP43Q8NDM7 1665 aa28.35■■■□□ 2.13
SIPA1-207ENST00000531339 ASXL2Q76L83 1435 aa28.34■■■□□ 2.13
SIPA1-207ENST00000531339 EPRSP07814 1512 aaKnown RBP28.33■■■□□ 2.13
SIPA1-207ENST00000531339 LRRIQ1Q96JM4 1722 aa28.32■■■□□ 2.12
SIPA1-207ENST00000531339 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
SIPA1-207ENST00000531339 ABCC2Q92887 1545 aa28.3■■■□□ 2.12
SIPA1-207ENST00000531339 UHRF1BP1LA0JNW5 1464 aa28.29■■■□□ 2.12
SIPA1-207ENST00000531339 ARID3CA6NKF2 412 aa28.26■■■□□ 2.11
SIPA1-207ENST00000531339 KANK4Q5T7N3 995 aaPredicted RBP28.26■■■□□ 2.11
SIPA1-207ENST00000531339 CDK13Q14004 1512 aaKnown RBP28.26■■■□□ 2.11
SIPA1-207ENST00000531339 LRRC9Q6ZRR7 1453 aa28.24■■■□□ 2.11
SIPA1-207ENST00000531339 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
SIPA1-207ENST00000531339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
SIPA1-207ENST00000531339 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
SIPA1-207ENST00000531339 ATP10BO94823 1461 aa28.21■■■□□ 2.11
SIPA1-207ENST00000531339 CDK11AQ9UQ88 783 aaPredicted RBP28.2■■■□□ 2.1
SIPA1-207ENST00000531339 MTUS2Q5JR59 1369 aa28.19■■■□□ 2.1
SIPA1-207ENST00000531339 EHBP1L1Q8N3D4 1523 aa28.14■■■□□ 2.1
SIPA1-207ENST00000531339 KDM5BQ9UGL1 1544 aa28.14■■■□□ 2.1
SIPA1-207ENST00000531339 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
SIPA1-207ENST00000531339 MAGI3Q5TCQ9 1506 aa28.11■■■□□ 2.09
SIPA1-207ENST00000531339 PLEKHD1A6NEE1 506 aa28.1■■■□□ 2.09
SIPA1-207ENST00000531339 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
SIPA1-207ENST00000531339 TROQ12816 1431 aaPredicted RBP28.08■■■□□ 2.09
SIPA1-207ENST00000531339 LMTK3Q96Q04 1460 aa28.06■■■□□ 2.08
SIPA1-207ENST00000531339 SUPT6HQ7KZ85 1726 aaKnown RBP28.04■■■□□ 2.08
SIPA1-207ENST00000531339 TRIM26Q12899 539 aaPredicted RBP28.01■■■□□ 2.07
SIPA1-207ENST00000531339 NCOA2Q15596 1464 aa27.99■■■□□ 2.07
SIPA1-207ENST00000531339 KIF14Q15058 1648 aa27.93■■■□□ 2.06
SIPA1-207ENST00000531339 PHLDB1Q86UU1 1377 aa27.93■■■□□ 2.06
SIPA1-207ENST00000531339 WDR7Q9Y4E6 1490 aa27.89■■■□□ 2.06
SIPA1-207ENST00000531339 ILDR2Q71H61 639 aa27.89■■■□□ 2.06
SIPA1-207ENST00000531339 PTPRMP28827 1452 aa27.87■■■□□ 2.05
SIPA1-207ENST00000531339 MYOM3Q5VTT5 1437 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms