RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CEP170Q5SW79 1584 aa30.76■■■□□ 2.51
SMPD1-205ENST00000531303 CTTNBP2Q8WZ74 1663 aa30.75■■■□□ 2.51
SMPD1-205ENST00000531303 NUP160Q12769 1436 aa30.7■■■□□ 2.51
SMPD1-205ENST00000531303 KIAA0586Q9BVV6 1533 aa30.64■■■□□ 2.5
SMPD1-205ENST00000531303 OSCARQ8IYS5 282 aa30.62■■■□□ 2.49
SMPD1-205ENST00000531303 IQGAP2Q13576 1575 aa30.61■■■□□ 2.49
SMPD1-205ENST00000531303 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
SMPD1-205ENST00000531303 CLASP1Q7Z460 1538 aa30.51■■■□□ 2.48
SMPD1-205ENST00000531303 JPH4Q96JJ6 628 aa30.5■■■□□ 2.47
SMPD1-205ENST00000531303 CLIP1P30622 1438 aa30.5■■■□□ 2.47
SMPD1-205ENST00000531303 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
SMPD1-205ENST00000531303 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
SMPD1-205ENST00000531303 ARHGAP35Q9NRY4 1499 aa30.4■■■□□ 2.46
SMPD1-205ENST00000531303 SHROOM2Q13796 1616 aa30.38■■■□□ 2.45
SMPD1-205ENST00000531303 PRG4Q92954 1404 aaPredicted RBP30.37■■■□□ 2.45
SMPD1-205ENST00000531303 EFCAB5A4FU69 1503 aa30.35■■■□□ 2.45
SMPD1-205ENST00000531303 SAMD9Q5K651 1589 aa30.35■■■□□ 2.45
SMPD1-205ENST00000531303 DISP1Q96F81 1524 aa30.34■■■□□ 2.45
SMPD1-205ENST00000531303 TTBK1Q5TCY1 1321 aaPredicted RBP30.32■■■□□ 2.44
SMPD1-205ENST00000531303 FHOD3Q2V2M9 1422 aa30.32■■■□□ 2.44
SMPD1-205ENST00000531303 CARMIL2Q6F5E8 1435 aa30.31■■■□□ 2.44
SMPD1-205ENST00000531303 KIAA0556O60303 1618 aa30.3■■■□□ 2.44
SMPD1-205ENST00000531303 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
SMPD1-205ENST00000531303 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
SMPD1-205ENST00000531303 PTPRGP23470 1445 aa30.11■■■□□ 2.41
SMPD1-205ENST00000531303 VPS8Q8N3P4 1428 aa30.11■■■□□ 2.41
SMPD1-205ENST00000531303 FMN1Q68DA7 1419 aa30.09■■■□□ 2.41
SMPD1-205ENST00000531303 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
SMPD1-205ENST00000531303 ATP1B4Q9UN42 357 aaPredicted RBP30.07■■■□□ 2.4
SMPD1-205ENST00000531303 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
SMPD1-205ENST00000531303 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
SMPD1-205ENST00000531303 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
SMPD1-205ENST00000531303 PCF11O94913 1555 aaKnown RBP30.01■■■□□ 2.39
SMPD1-205ENST00000531303 PLB1Q6P1J6 1458 aa29.99■■■□□ 2.39
SMPD1-205ENST00000531303 CASKIN1Q8WXD9 1431 aa29.95■■■□□ 2.39
SMPD1-205ENST00000531303 RAPGEF6Q8TEU7 1601 aa29.94■■■□□ 2.38
SMPD1-205ENST00000531303 ARID3CA6NKF2 412 aa29.94■■■□□ 2.38
SMPD1-205ENST00000531303 FYCO1Q9BQS8 1478 aa29.92■■■□□ 2.38
SMPD1-205ENST00000531303 ABCA8O94911 1581 aa29.91■■■□□ 2.38
SMPD1-205ENST00000531303 UACAQ9BZF9 1416 aa29.9■■■□□ 2.38
SMPD1-205ENST00000531303 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
SMPD1-205ENST00000531303 APLP2Q06481 763 aa29.87■■■□□ 2.37
SMPD1-205ENST00000531303 HECW1Q76N89 1606 aa29.87■■■□□ 2.37
SMPD1-205ENST00000531303 LRRIQ1Q96JM4 1722 aa29.84■■■□□ 2.37
SMPD1-205ENST00000531303 NUP153P49790 1475 aaKnown RBP29.84■■■□□ 2.37
SMPD1-205ENST00000531303 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
SMPD1-205ENST00000531303 ABCC2Q92887 1545 aa29.81■■■□□ 2.36
SMPD1-205ENST00000531303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
SMPD1-205ENST00000531303 HNRNPUL2Q1KMD3 747 aaKnown RBP29.8■■■□□ 2.36
SMPD1-205ENST00000531303 PPARGC1BQ86YN6 1023 aaKnown RBP29.8■■■□□ 2.36
SMPD1-205ENST00000531303 EPRSP07814 1512 aaKnown RBP29.78■■■□□ 2.36
SMPD1-205ENST00000531303 CDK13Q14004 1512 aaKnown RBP29.78■■■□□ 2.36
SMPD1-205ENST00000531303 ADCY10Q96PN6 1610 aa29.77■■■□□ 2.36
SMPD1-205ENST00000531303 UHRF1BP1LA0JNW5 1464 aa29.75■■■□□ 2.35
SMPD1-205ENST00000531303 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
SMPD1-205ENST00000531303 TIAM1Q13009 1591 aa29.72■■■□□ 2.35
SMPD1-205ENST00000531303 ATP10BO94823 1461 aa29.72■■■□□ 2.35
SMPD1-205ENST00000531303 CFAP43Q8NDM7 1665 aa29.7■■■□□ 2.35
SMPD1-205ENST00000531303 KANK4Q5T7N3 995 aaPredicted RBP29.68■■■□□ 2.34
SMPD1-205ENST00000531303 MAP3K1Q13233 1512 aa29.65■■■□□ 2.34
SMPD1-205ENST00000531303 ZCCHC11Q5TAX3 1644 aaKnown RBP29.65■■■□□ 2.34
SMPD1-205ENST00000531303 NPM1P06748 294 aaKnown RBP eCLIP29.64■■■□□ 2.34
SMPD1-205ENST00000531303 KDM5BQ9UGL1 1544 aa29.64■■■□□ 2.34
SMPD1-205ENST00000531303 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
SMPD1-205ENST00000531303 MTUS2Q5JR59 1369 aa29.58■■■□□ 2.33
SMPD1-205ENST00000531303 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
SMPD1-205ENST00000531303 MAGI3Q5TCQ9 1506 aa29.57■■■□□ 2.32
SMPD1-205ENST00000531303 PLEKHD1A6NEE1 506 aa29.57■■■□□ 2.32
SMPD1-205ENST00000531303 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
SMPD1-205ENST00000531303 TROQ12816 1431 aaPredicted RBP29.48■■■□□ 2.31
SMPD1-205ENST00000531303 KCNH8Q96L42 1107 aa29.47■■■□□ 2.31
SMPD1-205ENST00000531303 ASXL2Q76L83 1435 aa29.45■■■□□ 2.31
SMPD1-205ENST00000531303 SUPT6HQ7KZ85 1726 aaKnown RBP29.42■■■□□ 2.3
SMPD1-205ENST00000531303 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
SMPD1-205ENST00000531303 KIF14Q15058 1648 aa29.4■■■□□ 2.3
SMPD1-205ENST00000531303 NCOA2Q15596 1464 aa29.36■■■□□ 2.29
SMPD1-205ENST00000531303 MAPKBP1O60336 1514 aa29.35■■■□□ 2.29
SMPD1-205ENST00000531303 PHLDB1Q86UU1 1377 aa29.3■■■□□ 2.28
SMPD1-205ENST00000531303 CCNB3Q8WWL7 1395 aa29.26■■■□□ 2.28
SMPD1-205ENST00000531303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.25■■■□□ 2.27
SMPD1-205ENST00000531303 ABCC10Q5T3U5 1492 aa29.25■■■□□ 2.27
SMPD1-205ENST00000531303 TTC37Q6PGP7 1564 aa29.24■■■□□ 2.27
SMPD1-205ENST00000531303 MYOM3Q5VTT5 1437 aa29.19■■■□□ 2.26
SMPD1-205ENST00000531303 CDC42BPAQ5VT25 1732 aa29.18■■■□□ 2.26
SMPD1-205ENST00000531303 GPATCH8Q9UKJ3 1502 aaKnown RBP29.18■■■□□ 2.26
SMPD1-205ENST00000531303 FAM69CQ0P6D2 419 aa29.17■■■□□ 2.26
SMPD1-205ENST00000531303 ABCA9Q8IUA7 1624 aa29.16■■■□□ 2.26
SMPD1-205ENST00000531303 MYO5CQ9NQX4 1742 aa29.15■■■□□ 2.26
SMPD1-205ENST00000531303 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.26
SMPD1-205ENST00000531303 CFDP1Q9UEE9 299 aaPredicted RBP29.14■■■□□ 2.26
SMPD1-205ENST00000531303 DIP2BQ9P265 1576 aa29.14■■■□□ 2.26
SMPD1-205ENST00000531303 FGD6Q6ZV73 1430 aa29.12■■■□□ 2.25
SMPD1-205ENST00000531303 ZNF777Q9ULD5 760 aaPredicted RBP29.11■■■□□ 2.25
SMPD1-205ENST00000531303 CDC42BPBQ9Y5S2 1711 aa29.1■■■□□ 2.25
SMPD1-205ENST00000531303 FAM50AQ14320 339 aaKnown RBP29.1■■■□□ 2.25
SMPD1-205ENST00000531303 PREX2Q70Z35 1606 aa29.1■■■□□ 2.25
SMPD1-205ENST00000531303 GLI2P10070 1586 aa29.09■■■□□ 2.25
SMPD1-205ENST00000531303 CD109Q6YHK3 1445 aa29.09■■■□□ 2.25
SMPD1-205ENST00000531303 TRIM26Q12899 539 aaPredicted RBP29.09■■■□□ 2.25
SMPD1-205ENST00000531303 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 250.9 ms