RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
LINC01016-204ENST00000531046 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
LINC01016-204ENST00000531046 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
LINC01016-204ENST00000531046 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
LINC01016-204ENST00000531046 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
LINC01016-204ENST00000531046 CHIC1Q5VXU3 224 aa21.82■■□□□ 1.08
LINC01016-204ENST00000531046 IQGAP2Q13576 1575 aa21.74■■□□□ 1.07
LINC01016-204ENST00000531046 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
LINC01016-204ENST00000531046 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
LINC01016-204ENST00000531046 PRXQ9BXM0 1461 aa21.74■■□□□ 1.07
LINC01016-204ENST00000531046 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
LINC01016-204ENST00000531046 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
LINC01016-204ENST00000531046 EEA1Q15075 1411 aa21.68■■□□□ 1.06
LINC01016-204ENST00000531046 CARMIL2Q6F5E8 1435 aa21.65■■□□□ 1.06
LINC01016-204ENST00000531046 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
LINC01016-204ENST00000531046 DISP1Q96F81 1524 aa21.61■■□□□ 1.05
LINC01016-204ENST00000531046 UGGT2Q9NYU1 1516 aa21.6■■□□□ 1.05
LINC01016-204ENST00000531046 PTPRGP23470 1445 aa21.6■■□□□ 1.05
LINC01016-204ENST00000531046 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
LINC01016-204ENST00000531046 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
LINC01016-204ENST00000531046 KIAA0556O60303 1618 aa21.54■■□□□ 1.04
LINC01016-204ENST00000531046 EHMT2Q96KQ7 1210 aa21.52■■□□□ 1.04
LINC01016-204ENST00000531046 NPM1P06748 294 aaKnown RBP eCLIP21.51■■□□□ 1.03
LINC01016-204ENST00000531046 KIF21BO75037 1637 aa21.48■■□□□ 1.03
LINC01016-204ENST00000531046 GOLGA3Q08378 1498 aa21.48■■□□□ 1.03
LINC01016-204ENST00000531046 RANGAP1P46060 587 aaPredicted RBP21.46■■□□□ 1.03
LINC01016-204ENST00000531046 P3H3Q8IVL6 736 aa21.45■■□□□ 1.02
LINC01016-204ENST00000531046 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
LINC01016-204ENST00000531046 ABCC2Q92887 1545 aa21.39■■□□□ 1.02
LINC01016-204ENST00000531046 UHRF1BP1LA0JNW5 1464 aa21.39■■□□□ 1.02
LINC01016-204ENST00000531046 MAPKBP1O60336 1514 aa21.39■■□□□ 1.01
LINC01016-204ENST00000531046 UBTFP17480 764 aaKnown RBP21.38■■□□□ 1.01
LINC01016-204ENST00000531046 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
LINC01016-204ENST00000531046 KIF13AQ9H1H9 1805 aa21.35■■□□□ 1.01
LINC01016-204ENST00000531046 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
LINC01016-204ENST00000531046 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
LINC01016-204ENST00000531046 ABCC10Q5T3U5 1492 aa21.33■■□□□ 1.01
LINC01016-204ENST00000531046 ABCA8O94911 1581 aa21.31■■□□□ 1
LINC01016-204ENST00000531046 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
LINC01016-204ENST00000531046 ASXL2Q76L83 1435 aa21.29■■□□□ 1
LINC01016-204ENST00000531046 DIP2BQ9P265 1576 aa21.29■■□□□ 1
LINC01016-204ENST00000531046 ZCCHC11Q5TAX3 1644 aaKnown RBP21.29■■□□□ 1
LINC01016-204ENST00000531046 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
LINC01016-204ENST00000531046 ARID3CA6NKF2 412 aa21.26■□□□□ 0.99
LINC01016-204ENST00000531046 EFCAB5A4FU69 1503 aa21.22■□□□□ 0.99
LINC01016-204ENST00000531046 RAPGEF6Q8TEU7 1601 aa21.18■□□□□ 0.98
LINC01016-204ENST00000531046 TSPOAP1O95153 1857 aa21.18■□□□□ 0.98
LINC01016-204ENST00000531046 EPRSP07814 1512 aaKnown RBP21.16■□□□□ 0.98
LINC01016-204ENST00000531046 ATP10BO94823 1461 aa21.15■□□□□ 0.98
LINC01016-204ENST00000531046 ARHGAP35Q9NRY4 1499 aa21.15■□□□□ 0.98
LINC01016-204ENST00000531046 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
LINC01016-204ENST00000531046 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
LINC01016-204ENST00000531046 GLI2P10070 1586 aa21.13■□□□□ 0.97
LINC01016-204ENST00000531046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
LINC01016-204ENST00000531046 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
LINC01016-204ENST00000531046 NUP153P49790 1475 aaKnown RBP21.12■□□□□ 0.97
LINC01016-204ENST00000531046 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
LINC01016-204ENST00000531046 PPRC1Q5VV67 1664 aaKnown RBP21.05■□□□□ 0.96
LINC01016-204ENST00000531046 FMN1Q68DA7 1419 aa21.04■□□□□ 0.96
LINC01016-204ENST00000531046 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
LINC01016-204ENST00000531046 CLIP1P30622 1438 aa21■□□□□ 0.95
LINC01016-204ENST00000531046 CD109Q6YHK3 1445 aa20.99■□□□□ 0.95
LINC01016-204ENST00000531046 KDM6BO15054 1643 aa20.99■□□□□ 0.95
LINC01016-204ENST00000531046 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
LINC01016-204ENST00000531046 LOC105371045A0A1W2PR82 267 aa20.98■□□□□ 0.95
LINC01016-204ENST00000531046 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
LINC01016-204ENST00000531046 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
LINC01016-204ENST00000531046 HECW1Q76N89 1606 aa20.96■□□□□ 0.95
LINC01016-204ENST00000531046 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
LINC01016-204ENST00000531046 MAGI3Q5TCQ9 1506 aa20.91■□□□□ 0.94
LINC01016-204ENST00000531046 ABCA9Q8IUA7 1624 aa20.91■□□□□ 0.94
LINC01016-204ENST00000531046 PCF11O94913 1555 aaKnown RBP20.9■□□□□ 0.94
LINC01016-204ENST00000531046 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
LINC01016-204ENST00000531046 CEP162Q5TB80 1403 aa20.89■□□□□ 0.94
LINC01016-204ENST00000531046 CASKIN1Q8WXD9 1431 aa20.88■□□□□ 0.93
LINC01016-204ENST00000531046 LRRIQ1Q96JM4 1722 aa20.88■□□□□ 0.93
LINC01016-204ENST00000531046 CDK11AQ9UQ88 783 aaPredicted RBP20.84■□□□□ 0.93
LINC01016-204ENST00000531046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.92
LINC01016-204ENST00000531046 FYCO1Q9BQS8 1478 aa20.82■□□□□ 0.92
LINC01016-204ENST00000531046 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
LINC01016-204ENST00000531046 CCDC18Q5T9S5 1454 aa20.79■□□□□ 0.92
LINC01016-204ENST00000531046 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
LINC01016-204ENST00000531046 KIF14Q15058 1648 aa20.76■□□□□ 0.91
LINC01016-204ENST00000531046 NEO1Q92859 1461 aa20.74■□□□□ 0.91
LINC01016-204ENST00000531046 ARAP3Q8WWN8 1544 aa20.73■□□□□ 0.91
LINC01016-204ENST00000531046 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
LINC01016-204ENST00000531046 FANCAO15360 1455 aa20.72■□□□□ 0.91
LINC01016-204ENST00000531046 RAPGEF3O95398 923 aa20.71■□□□□ 0.91
LINC01016-204ENST00000531046 PLCH2O75038 1416 aa20.7■□□□□ 0.9
LINC01016-204ENST00000531046 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
LINC01016-204ENST00000531046 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
LINC01016-204ENST00000531046 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
LINC01016-204ENST00000531046 DENND4BO75064 1496 aaPredicted RBP20.63■□□□□ 0.89
LINC01016-204ENST00000531046 EFCAB2Q5VUJ9 269 aa20.63■□□□□ 0.89
LINC01016-204ENST00000531046 MTUS2Q5JR59 1369 aa20.62■□□□□ 0.89
LINC01016-204ENST00000531046 FRMPD1Q5SYB0 1578 aa20.62■□□□□ 0.89
LINC01016-204ENST00000531046 ARHGAP5Q13017 1502 aa20.62■□□□□ 0.89
LINC01016-204ENST00000531046 VPS8Q8N3P4 1428 aa20.61■□□□□ 0.89
LINC01016-204ENST00000531046 ADGRL1O94910 1474 aa20.61■□□□□ 0.89
LINC01016-204ENST00000531046 SCAPERQ9BY12 1400 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms