RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 KIAA0586Q9BVV6 1533 aa25.29■■□□□ 1.64
PPFIA1-216ENST00000530746 JPH4Q96JJ6 628 aa25.28■■□□□ 1.64
PPFIA1-216ENST00000530746 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
PPFIA1-216ENST00000530746 RAPGEF2Q9Y4G8 1499 aa25.25■■□□□ 1.63
PPFIA1-216ENST00000530746 IQGAP2Q13576 1575 aa25.15■■□□□ 1.62
PPFIA1-216ENST00000530746 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
PPFIA1-216ENST00000530746 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
PPFIA1-216ENST00000530746 EEA1Q15075 1411 aa25.09■■□□□ 1.61
PPFIA1-216ENST00000530746 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
PPFIA1-216ENST00000530746 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
PPFIA1-216ENST00000530746 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
PPFIA1-216ENST00000530746 UGGT2Q9NYU1 1516 aa25■■□□□ 1.59
PPFIA1-216ENST00000530746 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
PPFIA1-216ENST00000530746 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
PPFIA1-216ENST00000530746 FAM9AQ8IZU1 332 aaPredicted RBP24.94■■□□□ 1.58
PPFIA1-216ENST00000530746 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
PPFIA1-216ENST00000530746 PTPRGP23470 1445 aa24.93■■□□□ 1.58
PPFIA1-216ENST00000530746 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
PPFIA1-216ENST00000530746 KIAA0556O60303 1618 aa24.91■■□□□ 1.58
PPFIA1-216ENST00000530746 KIF21BO75037 1637 aa24.86■■□□□ 1.57
PPFIA1-216ENST00000530746 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
PPFIA1-216ENST00000530746 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
PPFIA1-216ENST00000530746 NPM1P06748 294 aaKnown RBP eCLIP24.82■■□□□ 1.56
PPFIA1-216ENST00000530746 MAPKBP1O60336 1514 aa24.78■■□□□ 1.56
PPFIA1-216ENST00000530746 UACAQ9BZF9 1416 aa24.77■■□□□ 1.56
PPFIA1-216ENST00000530746 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
PPFIA1-216ENST00000530746 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
PPFIA1-216ENST00000530746 KIF13AQ9H1H9 1805 aa24.74■■□□□ 1.55
PPFIA1-216ENST00000530746 SAMD9Q5K651 1589 aa24.71■■□□□ 1.55
PPFIA1-216ENST00000530746 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
PPFIA1-216ENST00000530746 PLB1Q6P1J6 1458 aa24.65■■□□□ 1.54
PPFIA1-216ENST00000530746 KDM5BQ9UGL1 1544 aa24.65■■□□□ 1.54
PPFIA1-216ENST00000530746 ABCA8O94911 1581 aa24.64■■□□□ 1.54
PPFIA1-216ENST00000530746 DIP2BQ9P265 1576 aa24.64■■□□□ 1.54
PPFIA1-216ENST00000530746 P3H3Q8IVL6 736 aa24.64■■□□□ 1.54
PPFIA1-216ENST00000530746 ZCCHC11Q5TAX3 1644 aaKnown RBP24.62■■□□□ 1.53
PPFIA1-216ENST00000530746 UBTFP17480 764 aaKnown RBP24.61■■□□□ 1.53
PPFIA1-216ENST00000530746 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
PPFIA1-216ENST00000530746 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
PPFIA1-216ENST00000530746 FAM69CQ0P6D2 419 aa24.59■■□□□ 1.53
PPFIA1-216ENST00000530746 ASXL2Q76L83 1435 aa24.59■■□□□ 1.53
PPFIA1-216ENST00000530746 EFCAB5A4FU69 1503 aa24.57■■□□□ 1.52
PPFIA1-216ENST00000530746 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
PPFIA1-216ENST00000530746 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
PPFIA1-216ENST00000530746 TSPOAP1O95153 1857 aa24.48■■□□□ 1.51
PPFIA1-216ENST00000530746 GLI2P10070 1586 aa24.48■■□□□ 1.51
PPFIA1-216ENST00000530746 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.51
PPFIA1-216ENST00000530746 EPRSP07814 1512 aaKnown RBP24.45■■□□□ 1.5
PPFIA1-216ENST00000530746 ATP10BO94823 1461 aa24.43■■□□□ 1.5
PPFIA1-216ENST00000530746 ARHGAP35Q9NRY4 1499 aa24.42■■□□□ 1.5
PPFIA1-216ENST00000530746 ARID3CA6NKF2 412 aa24.39■■□□□ 1.49
PPFIA1-216ENST00000530746 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.49
PPFIA1-216ENST00000530746 NUP153P49790 1475 aaKnown RBP24.38■■□□□ 1.49
PPFIA1-216ENST00000530746 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
PPFIA1-216ENST00000530746 FMN1Q68DA7 1419 aa24.34■■□□□ 1.49
PPFIA1-216ENST00000530746 KCNH8Q96L42 1107 aa24.32■■□□□ 1.48
PPFIA1-216ENST00000530746 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
PPFIA1-216ENST00000530746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
PPFIA1-216ENST00000530746 HNRNPUL2Q1KMD3 747 aaKnown RBP24.3■■□□□ 1.48
PPFIA1-216ENST00000530746 KDM6BO15054 1643 aa24.28■■□□□ 1.48
PPFIA1-216ENST00000530746 HECW1Q76N89 1606 aa24.25■■□□□ 1.47
PPFIA1-216ENST00000530746 TEX14Q8IWB6 1497 aa24.25■■□□□ 1.47
PPFIA1-216ENST00000530746 CD109Q6YHK3 1445 aa24.23■■□□□ 1.47
PPFIA1-216ENST00000530746 CLIP1P30622 1438 aa24.22■■□□□ 1.47
PPFIA1-216ENST00000530746 ABCA9Q8IUA7 1624 aa24.21■■□□□ 1.47
PPFIA1-216ENST00000530746 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.47
PPFIA1-216ENST00000530746 MAGI3Q5TCQ9 1506 aa24.2■■□□□ 1.47
PPFIA1-216ENST00000530746 PLEKHD1A6NEE1 506 aa24.19■■□□□ 1.46
PPFIA1-216ENST00000530746 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
PPFIA1-216ENST00000530746 LRRIQ1Q96JM4 1722 aa24.16■■□□□ 1.46
PPFIA1-216ENST00000530746 PCF11O94913 1555 aaKnown RBP24.14■■□□□ 1.45
PPFIA1-216ENST00000530746 CASKIN1Q8WXD9 1431 aa24.13■■□□□ 1.45
PPFIA1-216ENST00000530746 COL17A1Q9UMD9 1497 aaPredicted RBP24.1■■□□□ 1.45
PPFIA1-216ENST00000530746 CEP162Q5TB80 1403 aa24.09■■□□□ 1.45
PPFIA1-216ENST00000530746 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
PPFIA1-216ENST00000530746 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.07■■□□□ 1.44
PPFIA1-216ENST00000530746 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
PPFIA1-216ENST00000530746 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
PPFIA1-216ENST00000530746 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
PPFIA1-216ENST00000530746 TTC37Q6PGP7 1564 aa24.04■■□□□ 1.44
PPFIA1-216ENST00000530746 PHLDB1Q86UU1 1377 aa24.01■■□□□ 1.43
PPFIA1-216ENST00000530746 TROQ12816 1431 aaPredicted RBP24.01■■□□□ 1.43
PPFIA1-216ENST00000530746 NEO1Q92859 1461 aa24■■□□□ 1.43
PPFIA1-216ENST00000530746 ARAP3Q8WWN8 1544 aa24■■□□□ 1.43
PPFIA1-216ENST00000530746 KIF14Q15058 1648 aa23.99■■□□□ 1.43
PPFIA1-216ENST00000530746 CFAP74Q9C0B2 1584 aa23.95■■□□□ 1.43
PPFIA1-216ENST00000530746 MYO5CQ9NQX4 1742 aa23.95■■□□□ 1.42
PPFIA1-216ENST00000530746 FANCAO15360 1455 aa23.94■■□□□ 1.42
PPFIA1-216ENST00000530746 PLCH2O75038 1416 aa23.92■■□□□ 1.42
PPFIA1-216ENST00000530746 AKNAQ7Z591 1439 aa23.89■■□□□ 1.41
PPFIA1-216ENST00000530746 FRMPD1Q5SYB0 1578 aa23.84■■□□□ 1.41
PPFIA1-216ENST00000530746 RAPGEF3O95398 923 aa23.84■■□□□ 1.41
PPFIA1-216ENST00000530746 RICTORQ6R327 1708 aa23.84■■□□□ 1.41
PPFIA1-216ENST00000530746 CDC42BPBQ9Y5S2 1711 aa23.83■■□□□ 1.41
PPFIA1-216ENST00000530746 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
PPFIA1-216ENST00000530746 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
PPFIA1-216ENST00000530746 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
PPFIA1-216ENST00000530746 PREX2Q70Z35 1606 aa23.81■■□□□ 1.4
PPFIA1-216ENST00000530746 ARHGAP5Q13017 1502 aa23.8■■□□□ 1.4
PPFIA1-216ENST00000530746 CDC42BPAQ5VT25 1732 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms