RNA–Protein interactions for RNA: ENST00000530695.1

PKP3-207, Transcript of plakophilin 3, humanhuman

TSL 5

Gene PKP3, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-207ENST00000530695 JPH4Q96JJ6 628 aa29.61■■■□□ 2.33
PKP3-207ENST00000530695 IGF1RP08069 1367 aa29.6■■■□□ 2.33
PKP3-207ENST00000530695 KIAA0586Q9BVV6 1533 aa29.47■■■□□ 2.31
PKP3-207ENST00000530695 CARMIL1Q5VZK9 1371 aa29.42■■■□□ 2.3
PKP3-207ENST00000530695 KIF13AQ9H1H9 1805 aa29.37■■■□□ 2.29
PKP3-207ENST00000530695 ADCY10Q96PN6 1610 aa29.31■■■□□ 2.28
PKP3-207ENST00000530695 NPM1P06748 294 aaKnown RBP eCLIP29.27■■■□□ 2.28
PKP3-207ENST00000530695 IQGAP2Q13576 1575 aa29.26■■■□□ 2.27
PKP3-207ENST00000530695 MAPKBP1O60336 1514 aa29.22■■■□□ 2.27
PKP3-207ENST00000530695 CARMIL2Q6F5E8 1435 aa29.19■■■□□ 2.26
PKP3-207ENST00000530695 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
PKP3-207ENST00000530695 PTPRGP23470 1445 aa29.18■■■□□ 2.26
PKP3-207ENST00000530695 ABCC10Q5T3U5 1492 aa29.17■■■□□ 2.26
PKP3-207ENST00000530695 TTBK1Q5TCY1 1321 aaPredicted RBP29.14■■■□□ 2.25
PKP3-207ENST00000530695 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
PKP3-207ENST00000530695 FAM69CQ0P6D2 419 aa29.13■■■□□ 2.25
PKP3-207ENST00000530695 DIP2BQ9P265 1576 aa29.13■■■□□ 2.25
PKP3-207ENST00000530695 DISP1Q96F81 1524 aa29.07■■■□□ 2.24
PKP3-207ENST00000530695 UGGT2Q9NYU1 1516 aa29.04■■■□□ 2.24
PKP3-207ENST00000530695 CTTNBP2Q8WZ74 1663 aa29.03■■■□□ 2.24
PKP3-207ENST00000530695 ABCC2Q92887 1545 aa29.02■■■□□ 2.24
PKP3-207ENST00000530695 TSPOAP1O95153 1857 aa29.02■■■□□ 2.24
PKP3-207ENST00000530695 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
PKP3-207ENST00000530695 UHRF1BP1LA0JNW5 1464 aa28.97■■■□□ 2.23
PKP3-207ENST00000530695 UACAQ9BZF9 1416 aa28.96■■■□□ 2.23
PKP3-207ENST00000530695 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
PKP3-207ENST00000530695 PRXQ9BXM0 1461 aa28.9■■■□□ 2.22
PKP3-207ENST00000530695 ASXL2Q76L83 1435 aa28.89■■■□□ 2.22
PKP3-207ENST00000530695 PLB1Q6P1J6 1458 aa28.88■■■□□ 2.21
PKP3-207ENST00000530695 KDM6BO15054 1643 aa28.85■■■□□ 2.21
PKP3-207ENST00000530695 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
PKP3-207ENST00000530695 ZCCHC11Q5TAX3 1644 aaKnown RBP28.83■■■□□ 2.21
PKP3-207ENST00000530695 GOLGA3Q08378 1498 aa28.83■■■□□ 2.21
PKP3-207ENST00000530695 GLI2P10070 1586 aa28.82■■■□□ 2.2
PKP3-207ENST00000530695 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
PKP3-207ENST00000530695 EPRSP07814 1512 aaKnown RBP28.73■■■□□ 2.19
PKP3-207ENST00000530695 MAP3K4Q9Y6R4 1608 aa28.7■■■□□ 2.19
PKP3-207ENST00000530695 CSRNP3Q8WYN3 585 aa28.7■■■□□ 2.18
PKP3-207ENST00000530695 ABCA8O94911 1581 aa28.7■■■□□ 2.18
PKP3-207ENST00000530695 WDR7Q9Y4E6 1490 aa28.65■■■□□ 2.18
PKP3-207ENST00000530695 EEA1Q15075 1411 aa28.61■■■□□ 2.17
PKP3-207ENST00000530695 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
PKP3-207ENST00000530695 P3H3Q8IVL6 736 aa28.57■■■□□ 2.16
PKP3-207ENST00000530695 SAMD9Q5K651 1589 aa28.56■■■□□ 2.16
PKP3-207ENST00000530695 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
PKP3-207ENST00000530695 CFAP43Q8NDM7 1665 aa28.52■■■□□ 2.16
PKP3-207ENST00000530695 KCNH8Q96L42 1107 aa28.5■■■□□ 2.15
PKP3-207ENST00000530695 COL17A1Q9UMD9 1497 aaPredicted RBP28.5■■■□□ 2.15
PKP3-207ENST00000530695 CD109Q6YHK3 1445 aa28.45■■■□□ 2.15
PKP3-207ENST00000530695 KDM4FA0A1W2PPD8 638 aa28.45■■■□□ 2.14
PKP3-207ENST00000530695 ARID3CA6NKF2 412 aa28.45■■■□□ 2.14
PKP3-207ENST00000530695 RAPGEF6Q8TEU7 1601 aa28.44■■■□□ 2.14
PKP3-207ENST00000530695 ATP10BO94823 1461 aa28.44■■■□□ 2.14
PKP3-207ENST00000530695 KIF21BO75037 1637 aa28.43■■■□□ 2.14
PKP3-207ENST00000530695 MAGI3Q5TCQ9 1506 aa28.42■■■□□ 2.14
PKP3-207ENST00000530695 RANGAP1P46060 587 aaPredicted RBP28.41■■■□□ 2.14
PKP3-207ENST00000530695 FHOD3Q2V2M9 1422 aa28.35■■■□□ 2.13
PKP3-207ENST00000530695 ABCA9Q8IUA7 1624 aa28.31■■■□□ 2.12
PKP3-207ENST00000530695 EFCAB5A4FU69 1503 aa28.29■■■□□ 2.12
PKP3-207ENST00000530695 NUP153P49790 1475 aaKnown RBP28.29■■■□□ 2.12
PKP3-207ENST00000530695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.29■■■□□ 2.12
PKP3-207ENST00000530695 HNRNPUL2Q1KMD3 747 aaKnown RBP28.29■■■□□ 2.12
PKP3-207ENST00000530695 ADGRL1O94910 1474 aa28.28■■■□□ 2.12
PKP3-207ENST00000530695 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
PKP3-207ENST00000530695 ARAP3Q8WWN8 1544 aa28.21■■■□□ 2.11
PKP3-207ENST00000530695 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.1
PKP3-207ENST00000530695 UBTFP17480 764 aaKnown RBP28.17■■■□□ 2.1
PKP3-207ENST00000530695 PHLDB1Q86UU1 1377 aa28.14■■■□□ 2.1
PKP3-207ENST00000530695 PLEKHD1A6NEE1 506 aa28.12■■■□□ 2.09
PKP3-207ENST00000530695 NEO1Q92859 1461 aa28.11■■■□□ 2.09
PKP3-207ENST00000530695 CDK13Q14004 1512 aaKnown RBP28.05■■■□□ 2.08
PKP3-207ENST00000530695 ARHGAP35Q9NRY4 1499 aa28.04■■■□□ 2.08
PKP3-207ENST00000530695 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
PKP3-207ENST00000530695 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
PKP3-207ENST00000530695 FMN1Q68DA7 1419 aa28.02■■■□□ 2.08
PKP3-207ENST00000530695 TTC37Q6PGP7 1564 aa28.01■■■□□ 2.07
PKP3-207ENST00000530695 HECW1Q76N89 1606 aa28■■■□□ 2.07
PKP3-207ENST00000530695 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
PKP3-207ENST00000530695 CFAP74Q9C0B2 1584 aa27.99■■■□□ 2.07
PKP3-207ENST00000530695 ATP1B4Q9UN42 357 aaPredicted RBP27.97■■■□□ 2.07
PKP3-207ENST00000530695 FANCAO15360 1455 aa27.95■■■□□ 2.07
PKP3-207ENST00000530695 RICTORQ6R327 1708 aa27.95■■■□□ 2.06
PKP3-207ENST00000530695 AKNAQ7Z591 1439 aa27.93■■■□□ 2.06
PKP3-207ENST00000530695 DENND4BO75064 1496 aaPredicted RBP27.91■■■□□ 2.06
PKP3-207ENST00000530695 LRRIQ1Q96JM4 1722 aa27.89■■■□□ 2.06
PKP3-207ENST00000530695 HECW2Q9P2P5 1572 aa27.88■■■□□ 2.05
PKP3-207ENST00000530695 MYO5CQ9NQX4 1742 aa27.87■■■□□ 2.05
PKP3-207ENST00000530695 ADAMTSL3P82987 1691 aa27.86■■■□□ 2.05
PKP3-207ENST00000530695 CDK11AQ9UQ88 783 aaPredicted RBP27.85■■■□□ 2.05
PKP3-207ENST00000530695 ARHGEF40Q8TER5 1519 aa27.85■■■□□ 2.05
PKP3-207ENST00000530695 BCORL1Q5H9F3 1711 aa27.83■■■□□ 2.05
PKP3-207ENST00000530695 PLCH2O75038 1416 aa27.83■■■□□ 2.05
PKP3-207ENST00000530695 KIF14Q15058 1648 aa27.82■■■□□ 2.04
PKP3-207ENST00000530695 ARID4BQ4LE39 1312 aaPredicted RBP27.8■■■□□ 2.04
PKP3-207ENST00000530695 ZMYM4Q5VZL5 1548 aa27.8■■■□□ 2.04
PKP3-207ENST00000530695 TROQ12816 1431 aaPredicted RBP27.78■■■□□ 2.04
PKP3-207ENST00000530695 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
PKP3-207ENST00000530695 MADDQ8WXG6 1647 aa27.75■■■□□ 2.03
PKP3-207ENST00000530695 ZFYVE16Q7Z3T8 1539 aa27.75■■■□□ 2.03
PKP3-207ENST00000530695 PTPRMP28827 1452 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms