RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
SSBP3-213ENST00000530618 KIF13AQ9H1H9 1805 aa8.38□□□□□ -1.07
SSBP3-213ENST00000530618 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-213ENST00000530618 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
SSBP3-213ENST00000530618 RUSC2Q8N2Y8 1516 aa8.36□□□□□ -1.07
SSBP3-213ENST00000530618 FHAD1B1AJZ9 1412 aa8.36□□□□□ -1.07
SSBP3-213ENST00000530618 TRHP20396 242 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-213ENST00000530618 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
SSBP3-213ENST00000530618 CUL7Q14999 1698 aa8.27□□□□□ -1.08
SSBP3-213ENST00000530618 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-213ENST00000530618 PRG4Q92954 1404 aaPredicted RBP8.27□□□□□ -1.09
SSBP3-213ENST00000530618 DIP2BQ9P265 1576 aa8.26□□□□□ -1.09
SSBP3-213ENST00000530618 MAPKBP1O60336 1514 aa8.25□□□□□ -1.09
SSBP3-213ENST00000530618 IGF1RP08069 1367 aa8.23□□□□□ -1.09
SSBP3-213ENST00000530618 KIAA0586Q9BVV6 1533 aa8.23□□□□□ -1.09
SSBP3-213ENST00000530618 PPRC1Q5VV67 1664 aaKnown RBP8.21□□□□□ -1.09
SSBP3-213ENST00000530618 ABCC10Q5T3U5 1492 aa8.21□□□□□ -1.09
SSBP3-213ENST00000530618 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
SSBP3-213ENST00000530618 KIF27Q86VH2 1401 aa8.19□□□□□ -1.1
SSBP3-213ENST00000530618 TSPOAP1O95153 1857 aa8.18□□□□□ -1.1
SSBP3-213ENST00000530618 DISP1Q96F81 1524 aa8.17□□□□□ -1.1
SSBP3-213ENST00000530618 IQGAP2Q13576 1575 aa8.17□□□□□ -1.1
SSBP3-213ENST00000530618 ABCC2Q92887 1545 aa8.14□□□□□ -1.11
SSBP3-213ENST00000530618 CARMIL1Q5VZK9 1371 aa8.14□□□□□ -1.11
SSBP3-213ENST00000530618 KDM6BO15054 1643 aa8.14□□□□□ -1.11
SSBP3-213ENST00000530618 GLI2P10070 1586 aa8.14□□□□□ -1.11
SSBP3-213ENST00000530618 UGGT2Q9NYU1 1516 aa8.13□□□□□ -1.11
SSBP3-213ENST00000530618 CTTNBP2Q8WZ74 1663 aa8.13□□□□□ -1.11
SSBP3-213ENST00000530618 UHRF1BP1LA0JNW5 1464 aa8.13□□□□□ -1.11
SSBP3-213ENST00000530618 KIAA0556O60303 1618 aa8.12□□□□□ -1.11
SSBP3-213ENST00000530618 ZCCHC11Q5TAX3 1644 aaKnown RBP8.11□□□□□ -1.11
SSBP3-213ENST00000530618 MAP3K4Q9Y6R4 1608 aa8.11□□□□□ -1.11
SSBP3-213ENST00000530618 KDM5BQ9UGL1 1544 aa8.1□□□□□ -1.11
SSBP3-213ENST00000530618 FAM69CQ0P6D2 419 aa8.1□□□□□ -1.11
SSBP3-213ENST00000530618 PTPRGP23470 1445 aa8.1□□□□□ -1.11
SSBP3-213ENST00000530618 TNIKQ9UKE5 1360 aa8.1□□□□□ -1.11
SSBP3-213ENST00000530618 ASXL2Q76L83 1435 aa8.09□□□□□ -1.11
SSBP3-213ENST00000530618 COL17A1Q9UMD9 1497 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-213ENST00000530618 RAPGEF2Q9Y4G8 1499 aa8.08□□□□□ -1.12
SSBP3-213ENST00000530618 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
SSBP3-213ENST00000530618 EPRSP07814 1512 aaKnown RBP8.07□□□□□ -1.12
SSBP3-213ENST00000530618 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
SSBP3-213ENST00000530618 ABCA8O94911 1581 aa8.06□□□□□ -1.12
SSBP3-213ENST00000530618 CARMIL2Q6F5E8 1435 aa8.06□□□□□ -1.12
SSBP3-213ENST00000530618 KDM4FA0A1W2PPD8 638 aa8.05□□□□□ -1.12
SSBP3-213ENST00000530618 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
SSBP3-213ENST00000530618 CFAP43Q8NDM7 1665 aa8.03□□□□□ -1.12
SSBP3-213ENST00000530618 NPM1P06748 294 aaKnown RBP eCLIP8.03□□□□□ -1.12
SSBP3-213ENST00000530618 SAMD9Q5K651 1589 aa8.01□□□□□ -1.13
SSBP3-213ENST00000530618 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
SSBP3-213ENST00000530618 ADGRL1O94910 1474 aa8□□□□□ -1.13
SSBP3-213ENST00000530618 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
SSBP3-213ENST00000530618 TTBK1Q5TCY1 1321 aaPredicted RBP7.98□□□□□ -1.13
SSBP3-213ENST00000530618 GOLGA3Q08378 1498 aa7.97□□□□□ -1.13
SSBP3-213ENST00000530618 ABCA9Q8IUA7 1624 aa7.96□□□□□ -1.13
SSBP3-213ENST00000530618 TEX14Q8IWB6 1497 aa7.96□□□□□ -1.13
SSBP3-213ENST00000530618 KIF21BO75037 1637 aa7.96□□□□□ -1.14
SSBP3-213ENST00000530618 FRMPD1Q5SYB0 1578 aa7.95□□□□□ -1.14
SSBP3-213ENST00000530618 RAPGEF6Q8TEU7 1601 aa7.94□□□□□ -1.14
SSBP3-213ENST00000530618 ATP10BO94823 1461 aa7.94□□□□□ -1.14
SSBP3-213ENST00000530618 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
SSBP3-213ENST00000530618 HECW2Q9P2P5 1572 aa7.93□□□□□ -1.14
SSBP3-213ENST00000530618 CD109Q6YHK3 1445 aa7.92□□□□□ -1.14
SSBP3-213ENST00000530618 NUP153P49790 1475 aaKnown RBP7.91□□□□□ -1.14
SSBP3-213ENST00000530618 ADAMTSL3P82987 1691 aa7.91□□□□□ -1.14
SSBP3-213ENST00000530618 SIGLEC1Q9BZZ2 1709 aa7.91□□□□□ -1.14
SSBP3-213ENST00000530618 RICTORQ6R327 1708 aa7.9□□□□□ -1.14
SSBP3-213ENST00000530618 EEA1Q15075 1411 aa7.87□□□□□ -1.15
SSBP3-213ENST00000530618 BCORL1Q5H9F3 1711 aa7.87□□□□□ -1.15
SSBP3-213ENST00000530618 LRRIQ1Q96JM4 1722 aa7.87□□□□□ -1.15
SSBP3-213ENST00000530618 TTC37Q6PGP7 1564 aa7.87□□□□□ -1.15
SSBP3-213ENST00000530618 ARHGEF40Q8TER5 1519 aa7.86□□□□□ -1.15
SSBP3-213ENST00000530618 NEO1Q92859 1461 aa7.86□□□□□ -1.15
SSBP3-213ENST00000530618 FHOD3Q2V2M9 1422 aa7.86□□□□□ -1.15
SSBP3-213ENST00000530618 EFCAB5A4FU69 1503 aa7.85□□□□□ -1.15
SSBP3-213ENST00000530618 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.85□□□□□ -1.15
SSBP3-213ENST00000530618 CSRNP3Q8WYN3 585 aa7.85□□□□□ -1.15
SSBP3-213ENST00000530618 MADDQ8WXG6 1647 aa7.85□□□□□ -1.15
SSBP3-213ENST00000530618 P3H3Q8IVL6 736 aa7.84□□□□□ -1.15
SSBP3-213ENST00000530618 KCNH8Q96L42 1107 aa7.84□□□□□ -1.15
SSBP3-213ENST00000530618 ZMYM4Q5VZL5 1548 aa7.83□□□□□ -1.16
SSBP3-213ENST00000530618 CDK13Q14004 1512 aaKnown RBP7.83□□□□□ -1.16
SSBP3-213ENST00000530618 ARID3CA6NKF2 412 aa7.82□□□□□ -1.16
SSBP3-213ENST00000530618 CFAP74Q9C0B2 1584 aa7.82□□□□□ -1.16
SSBP3-213ENST00000530618 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
SSBP3-213ENST00000530618 PTPRMP28827 1452 aa7.81□□□□□ -1.16
SSBP3-213ENST00000530618 RIMS1Q86UR5 1692 aaKnown RBP7.81□□□□□ -1.16
SSBP3-213ENST00000530618 ILDR1Q86SU0 546 aaPredicted RBP7.8□□□□□ -1.16
SSBP3-213ENST00000530618 KIF14Q15058 1648 aa7.8□□□□□ -1.16
SSBP3-213ENST00000530618 MYO5CQ9NQX4 1742 aa7.79□□□□□ -1.16
SSBP3-213ENST00000530618 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
SSBP3-213ENST00000530618 ARHGAP35Q9NRY4 1499 aa7.79□□□□□ -1.16
SSBP3-213ENST00000530618 HECW1Q76N89 1606 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 FANCAO15360 1455 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 LMTK3Q96Q04 1460 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 CDC42BPBQ9Y5S2 1711 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 AKNAQ7Z591 1439 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 YEATS2Q9ULM3 1422 aa7.78□□□□□ -1.16
SSBP3-213ENST00000530618 FER1L4A9Z1Z3 1794 aa7.77□□□□□ -1.17
SSBP3-213ENST00000530618 PCF11O94913 1555 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms