RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 NUP160Q12769 1436 aa24.84■■□□□ 1.57
LTBP3-216ENST00000530426 CTTNBP2Q8WZ74 1663 aa24.82■■□□□ 1.56
LTBP3-216ENST00000530426 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
LTBP3-216ENST00000530426 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
LTBP3-216ENST00000530426 KIAA0586Q9BVV6 1533 aa24.77■■□□□ 1.56
LTBP3-216ENST00000530426 IQGAP2Q13576 1575 aa24.74■■□□□ 1.55
LTBP3-216ENST00000530426 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
LTBP3-216ENST00000530426 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
LTBP3-216ENST00000530426 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
LTBP3-216ENST00000530426 UGGT2Q9NYU1 1516 aa24.59■■□□□ 1.53
LTBP3-216ENST00000530426 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
LTBP3-216ENST00000530426 CLIP1P30622 1438 aa24.58■■□□□ 1.53
LTBP3-216ENST00000530426 PRG4Q92954 1404 aaPredicted RBP24.57■■□□□ 1.52
LTBP3-216ENST00000530426 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
LTBP3-216ENST00000530426 CARMIL2Q6F5E8 1435 aa24.54■■□□□ 1.52
LTBP3-216ENST00000530426 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
LTBP3-216ENST00000530426 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
LTBP3-216ENST00000530426 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
LTBP3-216ENST00000530426 DISP1Q96F81 1524 aa24.5■■□□□ 1.51
LTBP3-216ENST00000530426 SAMD9Q5K651 1589 aa24.5■■□□□ 1.51
LTBP3-216ENST00000530426 KIAA0556O60303 1618 aa24.5■■□□□ 1.51
LTBP3-216ENST00000530426 ERCC6L2Q5T890 1561 aa24.46■■□□□ 1.51
LTBP3-216ENST00000530426 FHOD3Q2V2M9 1422 aa24.45■■□□□ 1.51
LTBP3-216ENST00000530426 ARAP1Q96P48 1450 aa24.39■■□□□ 1.5
LTBP3-216ENST00000530426 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
LTBP3-216ENST00000530426 PTPRGP23470 1445 aa24.35■■□□□ 1.49
LTBP3-216ENST00000530426 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
LTBP3-216ENST00000530426 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
LTBP3-216ENST00000530426 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
LTBP3-216ENST00000530426 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
LTBP3-216ENST00000530426 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
LTBP3-216ENST00000530426 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
LTBP3-216ENST00000530426 VPS8Q8N3P4 1428 aa24.26■■□□□ 1.47
LTBP3-216ENST00000530426 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
LTBP3-216ENST00000530426 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
LTBP3-216ENST00000530426 RAPGEF6Q8TEU7 1601 aa24.2■■□□□ 1.46
LTBP3-216ENST00000530426 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.46
LTBP3-216ENST00000530426 UACAQ9BZF9 1416 aa24.19■■□□□ 1.46
LTBP3-216ENST00000530426 ABCA8O94911 1581 aa24.17■■□□□ 1.46
LTBP3-216ENST00000530426 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
LTBP3-216ENST00000530426 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
LTBP3-216ENST00000530426 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
LTBP3-216ENST00000530426 FYCO1Q9BQS8 1478 aa24.13■■□□□ 1.45
LTBP3-216ENST00000530426 APLP2Q06481 763 aa24.12■■□□□ 1.45
LTBP3-216ENST00000530426 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
LTBP3-216ENST00000530426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.11■■□□□ 1.45
LTBP3-216ENST00000530426 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
LTBP3-216ENST00000530426 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
LTBP3-216ENST00000530426 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
LTBP3-216ENST00000530426 ADCY10Q96PN6 1610 aa24.07■■□□□ 1.44
LTBP3-216ENST00000530426 NPM1P06748 294 aaKnown RBP eCLIP24.06■■□□□ 1.44
LTBP3-216ENST00000530426 EPRSP07814 1512 aaKnown RBP24.03■■□□□ 1.44
LTBP3-216ENST00000530426 CCDC18Q5T9S5 1454 aa24.02■■□□□ 1.44
LTBP3-216ENST00000530426 CDK13Q14004 1512 aaKnown RBP24.02■■□□□ 1.44
LTBP3-216ENST00000530426 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
LTBP3-216ENST00000530426 ATP10BO94823 1461 aa24■■□□□ 1.43
LTBP3-216ENST00000530426 ZCCHC11Q5TAX3 1644 aaKnown RBP23.98■■□□□ 1.43
LTBP3-216ENST00000530426 KDM5BQ9UGL1 1544 aa23.97■■□□□ 1.43
LTBP3-216ENST00000530426 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
LTBP3-216ENST00000530426 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
LTBP3-216ENST00000530426 CFAP43Q8NDM7 1665 aa23.94■■□□□ 1.42
LTBP3-216ENST00000530426 PLEKHD1A6NEE1 506 aa23.92■■□□□ 1.42
LTBP3-216ENST00000530426 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
LTBP3-216ENST00000530426 MAP3K1Q13233 1512 aa23.92■■□□□ 1.42
LTBP3-216ENST00000530426 MTUS2Q5JR59 1369 aa23.89■■□□□ 1.41
LTBP3-216ENST00000530426 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
LTBP3-216ENST00000530426 LRRC9Q6ZRR7 1453 aa23.85■■□□□ 1.41
LTBP3-216ENST00000530426 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
LTBP3-216ENST00000530426 KCNH8Q96L42 1107 aa23.83■■□□□ 1.41
LTBP3-216ENST00000530426 MAGI3Q5TCQ9 1506 aa23.83■■□□□ 1.41
LTBP3-216ENST00000530426 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
LTBP3-216ENST00000530426 EHBP1L1Q8N3D4 1523 aa23.81■■□□□ 1.4
LTBP3-216ENST00000530426 WDR7Q9Y4E6 1490 aa23.8■■□□□ 1.4
LTBP3-216ENST00000530426 MAPKBP1O60336 1514 aa23.78■■□□□ 1.4
LTBP3-216ENST00000530426 KIF14Q15058 1648 aa23.73■■□□□ 1.39
LTBP3-216ENST00000530426 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
LTBP3-216ENST00000530426 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
LTBP3-216ENST00000530426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.64■■□□□ 1.38
LTBP3-216ENST00000530426 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
LTBP3-216ENST00000530426 CCNB3Q8WWL7 1395 aa23.64■■□□□ 1.37
LTBP3-216ENST00000530426 ABCC10Q5T3U5 1492 aa23.62■■□□□ 1.37
LTBP3-216ENST00000530426 TTC37Q6PGP7 1564 aa23.61■■□□□ 1.37
LTBP3-216ENST00000530426 DIP2BQ9P265 1576 aa23.6■■□□□ 1.37
LTBP3-216ENST00000530426 TRHP20396 242 aaPredicted RBP23.59■■□□□ 1.37
LTBP3-216ENST00000530426 ABCA9Q8IUA7 1624 aa23.59■■□□□ 1.37
LTBP3-216ENST00000530426 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
LTBP3-216ENST00000530426 GLI2P10070 1586 aa23.57■■□□□ 1.36
LTBP3-216ENST00000530426 MYO5CQ9NQX4 1742 aa23.55■■□□□ 1.36
LTBP3-216ENST00000530426 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
LTBP3-216ENST00000530426 GPATCH8Q9UKJ3 1502 aaKnown RBP23.54■■□□□ 1.36
LTBP3-216ENST00000530426 MYOM3Q5VTT5 1437 aa23.54■■□□□ 1.36
LTBP3-216ENST00000530426 CD109Q6YHK3 1445 aa23.54■■□□□ 1.36
LTBP3-216ENST00000530426 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
LTBP3-216ENST00000530426 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
LTBP3-216ENST00000530426 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
LTBP3-216ENST00000530426 KIF13AQ9H1H9 1805 aa23.52■■□□□ 1.36
LTBP3-216ENST00000530426 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
LTBP3-216ENST00000530426 PLCH2O75038 1416 aa23.5■■□□□ 1.35
LTBP3-216ENST00000530426 PREX2Q70Z35 1606 aa23.5■■□□□ 1.35
LTBP3-216ENST00000530426 MAP3K4Q9Y6R4 1608 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms