RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 PRG4Q92954 1404 aaPredicted RBP24.4■■□□□ 1.5
SIPA1-206ENST00000530226 KIAA0586Q9BVV6 1533 aa24.36■■□□□ 1.49
SIPA1-206ENST00000530226 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
SIPA1-206ENST00000530226 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
SIPA1-206ENST00000530226 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
SIPA1-206ENST00000530226 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
SIPA1-206ENST00000530226 ADCY10Q96PN6 1610 aa24.17■■□□□ 1.46
SIPA1-206ENST00000530226 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
SIPA1-206ENST00000530226 CTTNBP2Q8WZ74 1663 aa24.12■■□□□ 1.45
SIPA1-206ENST00000530226 MAPKBP1O60336 1514 aa24.11■■□□□ 1.45
SIPA1-206ENST00000530226 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
SIPA1-206ENST00000530226 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
SIPA1-206ENST00000530226 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
SIPA1-206ENST00000530226 PTPRGP23470 1445 aa24.04■■□□□ 1.44
SIPA1-206ENST00000530226 DISP1Q96F81 1524 aa24.03■■□□□ 1.44
SIPA1-206ENST00000530226 KIAA0556O60303 1618 aa24.02■■□□□ 1.44
SIPA1-206ENST00000530226 NPM1P06748 294 aaKnown RBP eCLIP24.02■■□□□ 1.44
SIPA1-206ENST00000530226 PRXQ9BXM0 1461 aa24■■□□□ 1.43
SIPA1-206ENST00000530226 DIP2BQ9P265 1576 aa24■■□□□ 1.43
SIPA1-206ENST00000530226 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
SIPA1-206ENST00000530226 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
SIPA1-206ENST00000530226 ABCC2Q92887 1545 aa23.95■■□□□ 1.43
SIPA1-206ENST00000530226 UHRF1BP1LA0JNW5 1464 aa23.94■■□□□ 1.42
SIPA1-206ENST00000530226 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
SIPA1-206ENST00000530226 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
SIPA1-206ENST00000530226 TTBK1Q5TCY1 1321 aaPredicted RBP23.9■■□□□ 1.42
SIPA1-206ENST00000530226 EEA1Q15075 1411 aa23.9■■□□□ 1.42
SIPA1-206ENST00000530226 UACAQ9BZF9 1416 aa23.9■■□□□ 1.42
SIPA1-206ENST00000530226 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
SIPA1-206ENST00000530226 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
SIPA1-206ENST00000530226 KDM5BQ9UGL1 1544 aa23.81■■□□□ 1.4
SIPA1-206ENST00000530226 ASXL2Q76L83 1435 aa23.8■■□□□ 1.4
SIPA1-206ENST00000530226 TSPOAP1O95153 1857 aa23.79■■□□□ 1.4
SIPA1-206ENST00000530226 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
SIPA1-206ENST00000530226 GLI2P10070 1586 aa23.77■■□□□ 1.4
SIPA1-206ENST00000530226 ABCA8O94911 1581 aa23.74■■□□□ 1.39
SIPA1-206ENST00000530226 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
SIPA1-206ENST00000530226 KDM6BO15054 1643 aa23.73■■□□□ 1.39
SIPA1-206ENST00000530226 KIF21BO75037 1637 aa23.73■■□□□ 1.39
SIPA1-206ENST00000530226 EPRSP07814 1512 aaKnown RBP23.68■■□□□ 1.38
SIPA1-206ENST00000530226 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
SIPA1-206ENST00000530226 MAP3K4Q9Y6R4 1608 aa23.67■■□□□ 1.38
SIPA1-206ENST00000530226 WDR7Q9Y4E6 1490 aa23.67■■□□□ 1.38
SIPA1-206ENST00000530226 FAM9AQ8IZU1 332 aaPredicted RBP23.61■■□□□ 1.37
SIPA1-206ENST00000530226 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
SIPA1-206ENST00000530226 EFCAB5A4FU69 1503 aa23.59■■□□□ 1.37
SIPA1-206ENST00000530226 TEX14Q8IWB6 1497 aa23.58■■□□□ 1.37
SIPA1-206ENST00000530226 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
SIPA1-206ENST00000530226 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
SIPA1-206ENST00000530226 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
SIPA1-206ENST00000530226 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
SIPA1-206ENST00000530226 FHOD3Q2V2M9 1422 aa23.5■■□□□ 1.35
SIPA1-206ENST00000530226 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
SIPA1-206ENST00000530226 ATP10BO94823 1461 aa23.47■■□□□ 1.35
SIPA1-206ENST00000530226 MAGI3Q5TCQ9 1506 aa23.45■■□□□ 1.34
SIPA1-206ENST00000530226 NUP153P49790 1475 aaKnown RBP23.43■■□□□ 1.34
SIPA1-206ENST00000530226 RANGAP1P46060 587 aaPredicted RBP23.43■■□□□ 1.34
SIPA1-206ENST00000530226 CD109Q6YHK3 1445 aa23.42■■□□□ 1.34
SIPA1-206ENST00000530226 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
SIPA1-206ENST00000530226 ARID3CA6NKF2 412 aa23.4■■□□□ 1.34
SIPA1-206ENST00000530226 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
SIPA1-206ENST00000530226 UBTFP17480 764 aaKnown RBP23.35■■□□□ 1.33
SIPA1-206ENST00000530226 HECW1Q76N89 1606 aa23.32■■□□□ 1.32
SIPA1-206ENST00000530226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
SIPA1-206ENST00000530226 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
SIPA1-206ENST00000530226 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
SIPA1-206ENST00000530226 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
SIPA1-206ENST00000530226 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
SIPA1-206ENST00000530226 ADGRL1O94910 1474 aa23.27■■□□□ 1.32
SIPA1-206ENST00000530226 ARAP3Q8WWN8 1544 aa23.25■■□□□ 1.31
SIPA1-206ENST00000530226 CDK13Q14004 1512 aaKnown RBP23.24■■□□□ 1.31
SIPA1-206ENST00000530226 CFAP74Q9C0B2 1584 aa23.23■■□□□ 1.31
SIPA1-206ENST00000530226 NEO1Q92859 1461 aa23.23■■□□□ 1.31
SIPA1-206ENST00000530226 PHLDB1Q86UU1 1377 aa23.22■■□□□ 1.31
SIPA1-206ENST00000530226 TTC37Q6PGP7 1564 aa23.2■■□□□ 1.3
SIPA1-206ENST00000530226 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
SIPA1-206ENST00000530226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
SIPA1-206ENST00000530226 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.29
SIPA1-206ENST00000530226 KIF14Q15058 1648 aa23.12■■□□□ 1.29
SIPA1-206ENST00000530226 FRMPD1Q5SYB0 1578 aa23.12■■□□□ 1.29
SIPA1-206ENST00000530226 LRRIQ1Q96JM4 1722 aa23.12■■□□□ 1.29
SIPA1-206ENST00000530226 FANCAO15360 1455 aa23.11■■□□□ 1.29
SIPA1-206ENST00000530226 MYO5CQ9NQX4 1742 aa23.1■■□□□ 1.29
SIPA1-206ENST00000530226 RICTORQ6R327 1708 aa23.08■■□□□ 1.28
SIPA1-206ENST00000530226 CCDC18Q5T9S5 1454 aa23.07■■□□□ 1.28
SIPA1-206ENST00000530226 ATP1B4Q9UN42 357 aaPredicted RBP23.07■■□□□ 1.28
SIPA1-206ENST00000530226 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
SIPA1-206ENST00000530226 CDK11AQ9UQ88 783 aaPredicted RBP23.05■■□□□ 1.28
SIPA1-206ENST00000530226 CLIP1P30622 1438 aa23.05■■□□□ 1.28
SIPA1-206ENST00000530226 CASKIN1Q8WXD9 1431 aa23.05■■□□□ 1.28
SIPA1-206ENST00000530226 FYCO1Q9BQS8 1478 aa23.05■■□□□ 1.28
SIPA1-206ENST00000530226 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
SIPA1-206ENST00000530226 AKNAQ7Z591 1439 aa23.03■■□□□ 1.28
SIPA1-206ENST00000530226 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
SIPA1-206ENST00000530226 RAPGEF3O95398 923 aa23.02■■□□□ 1.28
SIPA1-206ENST00000530226 ZMYM4Q5VZL5 1548 aa23.01■■□□□ 1.27
SIPA1-206ENST00000530226 PLCH2O75038 1416 aa22.99■■□□□ 1.27
SIPA1-206ENST00000530226 HECW2Q9P2P5 1572 aa22.94■■□□□ 1.26
SIPA1-206ENST00000530226 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
SIPA1-206ENST00000530226 ARHGAP5Q13017 1502 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms