RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 JPH4Q96JJ6 628 aa21.31■■□□□ 1
CCDC90B-216ENST00000529856 SHROOM2Q13796 1616 aa21.3■■□□□ 1
CCDC90B-216ENST00000529856 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
CCDC90B-216ENST00000529856 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
CCDC90B-216ENST00000529856 ERCC6L2Q5T890 1561 aa21.25■□□□□ 0.99
CCDC90B-216ENST00000529856 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
CCDC90B-216ENST00000529856 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
CCDC90B-216ENST00000529856 PRXQ9BXM0 1461 aa21.23■□□□□ 0.99
CCDC90B-216ENST00000529856 EEA1Q15075 1411 aa21.22■□□□□ 0.99
CCDC90B-216ENST00000529856 FAM9AQ8IZU1 332 aaPredicted RBP21.15■□□□□ 0.98
CCDC90B-216ENST00000529856 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
CCDC90B-216ENST00000529856 IQGAP2Q13576 1575 aa21.14■□□□□ 0.97
CCDC90B-216ENST00000529856 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
CCDC90B-216ENST00000529856 CARMIL2Q6F5E8 1435 aa21.05■□□□□ 0.96
CCDC90B-216ENST00000529856 UGGT2Q9NYU1 1516 aa21.04■□□□□ 0.96
CCDC90B-216ENST00000529856 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
CCDC90B-216ENST00000529856 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
CCDC90B-216ENST00000529856 PTPRGP23470 1445 aa20.98■□□□□ 0.95
CCDC90B-216ENST00000529856 KIF21BO75037 1637 aa20.98■□□□□ 0.95
CCDC90B-216ENST00000529856 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
CCDC90B-216ENST00000529856 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
CCDC90B-216ENST00000529856 GOLGA3Q08378 1498 aa20.93■□□□□ 0.94
CCDC90B-216ENST00000529856 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
CCDC90B-216ENST00000529856 ADCY10Q96PN6 1610 aa20.89■□□□□ 0.93
CCDC90B-216ENST00000529856 NPM1P06748 294 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC90B-216ENST00000529856 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
CCDC90B-216ENST00000529856 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
CCDC90B-216ENST00000529856 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
CCDC90B-216ENST00000529856 P3H3Q8IVL6 736 aa20.82■□□□□ 0.92
CCDC90B-216ENST00000529856 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
CCDC90B-216ENST00000529856 PHF23Q9BUL5 403 aaPredicted RBP20.81■□□□□ 0.92
CCDC90B-216ENST00000529856 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
CCDC90B-216ENST00000529856 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
CCDC90B-216ENST00000529856 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
CCDC90B-216ENST00000529856 MAPKBP1O60336 1514 aa20.75■□□□□ 0.91
CCDC90B-216ENST00000529856 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
CCDC90B-216ENST00000529856 ABCA8O94911 1581 aa20.72■□□□□ 0.91
CCDC90B-216ENST00000529856 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
CCDC90B-216ENST00000529856 KDM5BQ9UGL1 1544 aa20.71■□□□□ 0.91
CCDC90B-216ENST00000529856 FHOD3Q2V2M9 1422 aa20.69■□□□□ 0.9
CCDC90B-216ENST00000529856 ABCC10Q5T3U5 1492 aa20.68■□□□□ 0.9
CCDC90B-216ENST00000529856 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
CCDC90B-216ENST00000529856 KIF13AQ9H1H9 1805 aa20.66■□□□□ 0.9
CCDC90B-216ENST00000529856 ZCCHC11Q5TAX3 1644 aaKnown RBP20.65■□□□□ 0.9
CCDC90B-216ENST00000529856 ASXL2Q76L83 1435 aa20.65■□□□□ 0.9
CCDC90B-216ENST00000529856 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
CCDC90B-216ENST00000529856 DIP2BQ9P265 1576 aa20.62■□□□□ 0.89
CCDC90B-216ENST00000529856 RAPGEF6Q8TEU7 1601 aa20.6■□□□□ 0.89
CCDC90B-216ENST00000529856 ATP10BO94823 1461 aa20.57■□□□□ 0.88
CCDC90B-216ENST00000529856 ARID3CA6NKF2 412 aa20.56■□□□□ 0.88
CCDC90B-216ENST00000529856 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
CCDC90B-216ENST00000529856 WDR7Q9Y4E6 1490 aa20.54■□□□□ 0.88
CCDC90B-216ENST00000529856 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
CCDC90B-216ENST00000529856 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
CCDC90B-216ENST00000529856 GLI2P10070 1586 aa20.53■□□□□ 0.88
CCDC90B-216ENST00000529856 LOC105371045A0A1W2PR82 267 aa20.5■□□□□ 0.87
CCDC90B-216ENST00000529856 CLIP1P30622 1438 aa20.5■□□□□ 0.87
CCDC90B-216ENST00000529856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
CCDC90B-216ENST00000529856 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
CCDC90B-216ENST00000529856 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
CCDC90B-216ENST00000529856 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
CCDC90B-216ENST00000529856 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
CCDC90B-216ENST00000529856 PLEKHD1A6NEE1 506 aa20.42■□□□□ 0.86
CCDC90B-216ENST00000529856 MAP3K4Q9Y6R4 1608 aa20.42■□□□□ 0.86
CCDC90B-216ENST00000529856 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
CCDC90B-216ENST00000529856 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
CCDC90B-216ENST00000529856 PPRC1Q5VV67 1664 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-216ENST00000529856 CDK13Q14004 1512 aaKnown RBP20.38■□□□□ 0.85
CCDC90B-216ENST00000529856 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
CCDC90B-216ENST00000529856 CD109Q6YHK3 1445 aa20.36■□□□□ 0.85
CCDC90B-216ENST00000529856 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
CCDC90B-216ENST00000529856 PCF11O94913 1555 aaKnown RBP20.34■□□□□ 0.85
CCDC90B-216ENST00000529856 TEX14Q8IWB6 1497 aa20.33■□□□□ 0.85
CCDC90B-216ENST00000529856 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
CCDC90B-216ENST00000529856 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
CCDC90B-216ENST00000529856 ABCA9Q8IUA7 1624 aa20.32■□□□□ 0.84
CCDC90B-216ENST00000529856 FYCO1Q9BQS8 1478 aa20.31■□□□□ 0.84
CCDC90B-216ENST00000529856 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
CCDC90B-216ENST00000529856 KDM6BO15054 1643 aa20.28■□□□□ 0.84
CCDC90B-216ENST00000529856 CCDC18Q5T9S5 1454 aa20.27■□□□□ 0.84
CCDC90B-216ENST00000529856 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCDC90B-216ENST00000529856 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
CCDC90B-216ENST00000529856 COL17A1Q9UMD9 1497 aaPredicted RBP20.24■□□□□ 0.83
CCDC90B-216ENST00000529856 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
CCDC90B-216ENST00000529856 TTC37Q6PGP7 1564 aa20.19■□□□□ 0.82
CCDC90B-216ENST00000529856 NEO1Q92859 1461 aa20.17■□□□□ 0.82
CCDC90B-216ENST00000529856 KIF14Q15058 1648 aa20.16■□□□□ 0.82
CCDC90B-216ENST00000529856 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
CCDC90B-216ENST00000529856 PLCH2O75038 1416 aa20.15■□□□□ 0.82
CCDC90B-216ENST00000529856 ARAP3Q8WWN8 1544 aa20.15■□□□□ 0.82
CCDC90B-216ENST00000529856 FANCAO15360 1455 aa20.11■□□□□ 0.81
CCDC90B-216ENST00000529856 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
CCDC90B-216ENST00000529856 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
CCDC90B-216ENST00000529856 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
CCDC90B-216ENST00000529856 MTUS2Q5JR59 1369 aa20.08■□□□□ 0.81
CCDC90B-216ENST00000529856 CFAP74Q9C0B2 1584 aa20.08■□□□□ 0.81
CCDC90B-216ENST00000529856 RAPGEF3O95398 923 aa20.06■□□□□ 0.8
CCDC90B-216ENST00000529856 DENND4BO75064 1496 aaPredicted RBP20.03■□□□□ 0.8
CCDC90B-216ENST00000529856 TIAM1Q13009 1591 aa20.03■□□□□ 0.8
CCDC90B-216ENST00000529856 ARHGAP5Q13017 1502 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms