RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-208ENST00000529505 JPH4Q96JJ6 628 aa35.82■■■■□ 3.32
SMIM19-208ENST00000529505 CUL7Q14999 1698 aa35.81■■■■□ 3.32
SMIM19-208ENST00000529505 KIAA0586Q9BVV6 1533 aa35.7■■■■□ 3.31
SMIM19-208ENST00000529505 CARMIL1Q5VZK9 1371 aa35.59■■■■□ 3.29
SMIM19-208ENST00000529505 KIF13AQ9H1H9 1805 aa35.49■■■■□ 3.27
SMIM19-208ENST00000529505 ADCY10Q96PN6 1610 aa35.47■■■■□ 3.27
SMIM19-208ENST00000529505 MAPKBP1O60336 1514 aa35.42■■■■□ 3.26
SMIM19-208ENST00000529505 IQGAP2Q13576 1575 aa35.38■■■■□ 3.25
SMIM19-208ENST00000529505 ABCC10Q5T3U5 1492 aa35.35■■■■□ 3.25
SMIM19-208ENST00000529505 NPM1P06748 294 aaKnown RBP eCLIP35.33■■■■□ 3.25
SMIM19-208ENST00000529505 CHIC1Q5VXU3 224 aa35.31■■■■□ 3.24
SMIM19-208ENST00000529505 PTPRGP23470 1445 aa35.3■■■■□ 3.24
SMIM19-208ENST00000529505 RAPGEF2Q9Y4G8 1499 aa35.29■■■■□ 3.24
SMIM19-208ENST00000529505 CARMIL2Q6F5E8 1435 aa35.29■■■■□ 3.24
SMIM19-208ENST00000529505 DIP2BQ9P265 1576 aa35.28■■■■□ 3.24
SMIM19-208ENST00000529505 TNIKQ9UKE5 1360 aa35.26■■■■□ 3.24
SMIM19-208ENST00000529505 FAM69CQ0P6D2 419 aa35.22■■■■□ 3.23
SMIM19-208ENST00000529505 DISP1Q96F81 1524 aa35.22■■■■□ 3.23
SMIM19-208ENST00000529505 UGGT2Q9NYU1 1516 aa35.18■■■■□ 3.22
SMIM19-208ENST00000529505 ABCC2Q92887 1545 aa35.14■■■■□ 3.22
SMIM19-208ENST00000529505 CSRNP3Q8WYN3 585 aa35.12■■■■□ 3.21
SMIM19-208ENST00000529505 EEA1Q15075 1411 aa35.12■■■■□ 3.21
SMIM19-208ENST00000529505 UHRF1BP1LA0JNW5 1464 aa35.11■■■■□ 3.21
SMIM19-208ENST00000529505 TTBK1Q5TCY1 1321 aaPredicted RBP35.1■■■■□ 3.21
SMIM19-208ENST00000529505 PRXQ9BXM0 1461 aa35.07■■■■□ 3.2
SMIM19-208ENST00000529505 UACAQ9BZF9 1416 aa35.06■■■■□ 3.2
SMIM19-208ENST00000529505 KIAA0556O60303 1618 aa35.06■■■■□ 3.2
SMIM19-208ENST00000529505 CTTNBP2Q8WZ74 1663 aa35.04■■■■□ 3.2
SMIM19-208ENST00000529505 ASXL2Q76L83 1435 aa34.98■■■■□ 3.19
SMIM19-208ENST00000529505 PLB1Q6P1J6 1458 aa34.97■■■■□ 3.19
SMIM19-208ENST00000529505 TSPOAP1O95153 1857 aa34.96■■■■□ 3.19
SMIM19-208ENST00000529505 KDM5BQ9UGL1 1544 aa34.96■■■■□ 3.19
SMIM19-208ENST00000529505 AEBP2Q6ZN18 517 aaPredicted RBP34.94■■■■□ 3.18
SMIM19-208ENST00000529505 GLI2P10070 1586 aa34.92■■■■□ 3.18
SMIM19-208ENST00000529505 KDM6BO15054 1643 aa34.89■■■■□ 3.18
SMIM19-208ENST00000529505 FAM9AQ8IZU1 332 aaPredicted RBP34.87■■■■□ 3.17
SMIM19-208ENST00000529505 GOLGA3Q08378 1498 aa34.86■■■■□ 3.17
SMIM19-208ENST00000529505 ZCCHC11Q5TAX3 1644 aaKnown RBP34.86■■■■□ 3.17
SMIM19-208ENST00000529505 PPRC1Q5VV67 1664 aaKnown RBP34.83■■■■□ 3.17
SMIM19-208ENST00000529505 EPRSP07814 1512 aaKnown RBP34.79■■■■□ 3.16
SMIM19-208ENST00000529505 ABCA8O94911 1581 aa34.75■■■■□ 3.15
SMIM19-208ENST00000529505 MAP3K4Q9Y6R4 1608 aa34.73■■■■□ 3.15
SMIM19-208ENST00000529505 WDR7Q9Y4E6 1490 aa34.68■■■■□ 3.14
SMIM19-208ENST00000529505 KIF21BO75037 1637 aa34.63■■■■□ 3.13
SMIM19-208ENST00000529505 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
SMIM19-208ENST00000529505 SAMD9Q5K651 1589 aa34.57■■■■□ 3.12
SMIM19-208ENST00000529505 COL17A1Q9UMD9 1497 aaPredicted RBP34.55■■■■□ 3.12
SMIM19-208ENST00000529505 CFAP43Q8NDM7 1665 aa34.48■■■■□ 3.11
SMIM19-208ENST00000529505 KDM4FA0A1W2PPD8 638 aa34.47■■■■□ 3.11
SMIM19-208ENST00000529505 P3H3Q8IVL6 736 aa34.47■■■■□ 3.11
SMIM19-208ENST00000529505 UBTFP17480 764 aaKnown RBP34.45■■■■□ 3.11
SMIM19-208ENST00000529505 MAGI3Q5TCQ9 1506 aa34.45■■■■□ 3.1
SMIM19-208ENST00000529505 ATP10BO94823 1461 aa34.43■■■■□ 3.1
SMIM19-208ENST00000529505 CD109Q6YHK3 1445 aa34.42■■■■□ 3.1
SMIM19-208ENST00000529505 KCNH8Q96L42 1107 aa34.39■■■■□ 3.1
SMIM19-208ENST00000529505 RAPGEF6Q8TEU7 1601 aa34.37■■■■□ 3.09
SMIM19-208ENST00000529505 EHMT2Q96KQ7 1210 aa34.33■■■■□ 3.09
SMIM19-208ENST00000529505 ARID3CA6NKF2 412 aa34.31■■■■□ 3.08
SMIM19-208ENST00000529505 FHOD3Q2V2M9 1422 aa34.27■■■■□ 3.08
SMIM19-208ENST00000529505 RANGAP1P46060 587 aaPredicted RBP34.26■■■■□ 3.08
SMIM19-208ENST00000529505 NUP153P49790 1475 aaKnown RBP34.26■■■■□ 3.07
SMIM19-208ENST00000529505 ABCA9Q8IUA7 1624 aa34.26■■■■□ 3.07
SMIM19-208ENST00000529505 ADGRL1O94910 1474 aa34.25■■■■□ 3.07
SMIM19-208ENST00000529505 EFCAB5A4FU69 1503 aa34.23■■■■□ 3.07
SMIM19-208ENST00000529505 ARAP3Q8WWN8 1544 aa34.17■■■■□ 3.06
SMIM19-208ENST00000529505 PHLDB1Q86UU1 1377 aa34.1■■■■□ 3.05
SMIM19-208ENST00000529505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.08■■■■□ 3.05
SMIM19-208ENST00000529505 HNRNPUL2Q1KMD3 747 aaKnown RBP34.08■■■■□ 3.05
SMIM19-208ENST00000529505 NEO1Q92859 1461 aa34.05■■■■□ 3.04
SMIM19-208ENST00000529505 ARHGAP35Q9NRY4 1499 aa34.03■■■■□ 3.04
SMIM19-208ENST00000529505 PLEKHD1A6NEE1 506 aa33.97■■■■□ 3.03
SMIM19-208ENST00000529505 FMN1Q68DA7 1419 aa33.96■■■■□ 3.03
SMIM19-208ENST00000529505 FRMPD1Q5SYB0 1578 aa33.93■■■■□ 3.02
SMIM19-208ENST00000529505 CDK13Q14004 1512 aaKnown RBP33.92■■■■□ 3.02
SMIM19-208ENST00000529505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.92■■■■□ 3.02
SMIM19-208ENST00000529505 RAPGEF3O95398 923 aa33.88■■■■□ 3.01
SMIM19-208ENST00000529505 TTC37Q6PGP7 1564 aa33.88■■■■□ 3.01
SMIM19-208ENST00000529505 CLIP1P30622 1438 aa33.86■■■■□ 3.01
SMIM19-208ENST00000529505 HECW1Q76N89 1606 aa33.84■■■■□ 3.01
SMIM19-208ENST00000529505 LOC105371045A0A1W2PR82 267 aa33.84■■■■□ 3.01
SMIM19-208ENST00000529505 CFAP74Q9C0B2 1584 aa33.83■■■■□ 3.01
SMIM19-208ENST00000529505 FANCAO15360 1455 aa33.82■■■■□ 3
SMIM19-208ENST00000529505 RICTORQ6R327 1708 aa33.8■■■■□ 3
SMIM19-208ENST00000529505 AKNAQ7Z591 1439 aa33.79■■■■□ 3
SMIM19-208ENST00000529505 DENND4BO75064 1496 aaPredicted RBP33.78■■■■□ 3
SMIM19-208ENST00000529505 HECW2Q9P2P5 1572 aa33.75■■■□□ 2.99
SMIM19-208ENST00000529505 ADAMTSL3P82987 1691 aa33.74■■■□□ 2.99
SMIM19-208ENST00000529505 ARHGEF40Q8TER5 1519 aa33.73■■■□□ 2.99
SMIM19-208ENST00000529505 ATP1B4Q9UN42 357 aaPredicted RBP33.71■■■□□ 2.99
SMIM19-208ENST00000529505 PLCH2O75038 1416 aa33.7■■■□□ 2.98
SMIM19-208ENST00000529505 CEP162Q5TB80 1403 aa33.7■■■□□ 2.98
SMIM19-208ENST00000529505 ZMYM4Q5VZL5 1548 aa33.69■■■□□ 2.98
SMIM19-208ENST00000529505 CASKIN1Q8WXD9 1431 aa33.68■■■□□ 2.98
SMIM19-208ENST00000529505 LRRIQ1Q96JM4 1722 aa33.67■■■□□ 2.98
SMIM19-208ENST00000529505 BCORL1Q5H9F3 1711 aa33.66■■■□□ 2.98
SMIM19-208ENST00000529505 CDK11AQ9UQ88 783 aaPredicted RBP33.64■■■□□ 2.98
SMIM19-208ENST00000529505 KIF14Q15058 1648 aa33.63■■■□□ 2.97
SMIM19-208ENST00000529505 TROQ12816 1431 aaPredicted RBP33.62■■■□□ 2.97
SMIM19-208ENST00000529505 MYO5CQ9NQX4 1742 aa33.62■■■□□ 2.97
SMIM19-208ENST00000529505 PTPRMP28827 1452 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms