RNA–Protein interactions for RNA: ENST00000529500.1

PSMC3-206, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-206ENST00000529500 CEP170Q5SW79 1584 aa22.18■■□□□ 1.14
PSMC3-206ENST00000529500 CUL7Q14999 1698 aa22.14■■□□□ 1.14
PSMC3-206ENST00000529500 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
PSMC3-206ENST00000529500 PRG4Q92954 1404 aaPredicted RBP22.08■■□□□ 1.13
PSMC3-206ENST00000529500 KIAA0586Q9BVV6 1533 aa22.07■■□□□ 1.12
PSMC3-206ENST00000529500 RUSC2Q8N2Y8 1516 aa22.05■■□□□ 1.12
PSMC3-206ENST00000529500 SHROOM2Q13796 1616 aa22.03■■□□□ 1.12
PSMC3-206ENST00000529500 TRHP20396 242 aaPredicted RBP22.02■■□□□ 1.12
PSMC3-206ENST00000529500 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
PSMC3-206ENST00000529500 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
PSMC3-206ENST00000529500 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
PSMC3-206ENST00000529500 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
PSMC3-206ENST00000529500 KIF21BO75037 1637 aa21.95■■□□□ 1.1
PSMC3-206ENST00000529500 CARMIL2Q6F5E8 1435 aa21.91■■□□□ 1.1
PSMC3-206ENST00000529500 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
PSMC3-206ENST00000529500 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
PSMC3-206ENST00000529500 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
PSMC3-206ENST00000529500 PRXQ9BXM0 1461 aa21.86■■□□□ 1.09
PSMC3-206ENST00000529500 IQGAP2Q13576 1575 aa21.85■■□□□ 1.09
PSMC3-206ENST00000529500 PTPRGP23470 1445 aa21.84■■□□□ 1.09
PSMC3-206ENST00000529500 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
PSMC3-206ENST00000529500 PCGF6Q9BYE7 350 aa21.83■■□□□ 1.09
PSMC3-206ENST00000529500 TTBK1Q5TCY1 1321 aaPredicted RBP21.82■■□□□ 1.08
PSMC3-206ENST00000529500 UBTFP17480 764 aaKnown RBP21.79■■□□□ 1.08
PSMC3-206ENST00000529500 UGGT2Q9NYU1 1516 aa21.75■■□□□ 1.07
PSMC3-206ENST00000529500 DISP1Q96F81 1524 aa21.71■■□□□ 1.07
PSMC3-206ENST00000529500 UACAQ9BZF9 1416 aa21.64■■□□□ 1.06
PSMC3-206ENST00000529500 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
PSMC3-206ENST00000529500 ADCY10Q96PN6 1610 aa21.62■■□□□ 1.05
PSMC3-206ENST00000529500 FAM69CQ0P6D2 419 aa21.62■■□□□ 1.05
PSMC3-206ENST00000529500 KIAA0556O60303 1618 aa21.62■■□□□ 1.05
PSMC3-206ENST00000529500 CLIP1P30622 1438 aa21.61■■□□□ 1.05
PSMC3-206ENST00000529500 UHRF1BP1LA0JNW5 1464 aa21.6■■□□□ 1.05
PSMC3-206ENST00000529500 HRCP23327 699 aa21.59■■□□□ 1.05
PSMC3-206ENST00000529500 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
PSMC3-206ENST00000529500 ABCC2Q92887 1545 aa21.59■■□□□ 1.05
PSMC3-206ENST00000529500 MAPKBP1O60336 1514 aa21.58■■□□□ 1.04
PSMC3-206ENST00000529500 RANGAP1P46060 587 aaPredicted RBP21.56■■□□□ 1.04
PSMC3-206ENST00000529500 ABCC10Q5T3U5 1492 aa21.55■■□□□ 1.04
PSMC3-206ENST00000529500 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
PSMC3-206ENST00000529500 PLB1Q6P1J6 1458 aa21.51■■□□□ 1.03
PSMC3-206ENST00000529500 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
PSMC3-206ENST00000529500 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
PSMC3-206ENST00000529500 ASXL2Q76L83 1435 aa21.48■■□□□ 1.03
PSMC3-206ENST00000529500 DIP2BQ9P265 1576 aa21.41■■□□□ 1.02
PSMC3-206ENST00000529500 KIF13AQ9H1H9 1805 aa21.41■■□□□ 1.02
PSMC3-206ENST00000529500 ABCA8O94911 1581 aa21.4■■□□□ 1.02
PSMC3-206ENST00000529500 SAMD9Q5K651 1589 aa21.4■■□□□ 1.02
PSMC3-206ENST00000529500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
PSMC3-206ENST00000529500 HNRNPUL2Q1KMD3 747 aaKnown RBP21.37■■□□□ 1.01
PSMC3-206ENST00000529500 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
PSMC3-206ENST00000529500 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
PSMC3-206ENST00000529500 ARID3CA6NKF2 412 aa21.35■■□□□ 1.01
PSMC3-206ENST00000529500 ZCCHC11Q5TAX3 1644 aaKnown RBP21.35■■□□□ 1.01
PSMC3-206ENST00000529500 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
PSMC3-206ENST00000529500 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1
PSMC3-206ENST00000529500 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
PSMC3-206ENST00000529500 GLI2P10070 1586 aa21.32■■□□□ 1
PSMC3-206ENST00000529500 PPARGC1BQ86YN6 1023 aaKnown RBP21.31■■□□□ 1
PSMC3-206ENST00000529500 ATP10BO94823 1461 aa21.31■■□□□ 1
PSMC3-206ENST00000529500 APLP2Q06481 763 aa21.28■■□□□ 1
PSMC3-206ENST00000529500 ARHGAP35Q9NRY4 1499 aa21.27■■□□□ 1
PSMC3-206ENST00000529500 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
PSMC3-206ENST00000529500 RAPGEF6Q8TEU7 1601 aa21.26■□□□□ 0.99
PSMC3-206ENST00000529500 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
PSMC3-206ENST00000529500 ATP1B4Q9UN42 357 aaPredicted RBP21.25■□□□□ 0.99
PSMC3-206ENST00000529500 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
PSMC3-206ENST00000529500 TSPOAP1O95153 1857 aa21.23■□□□□ 0.99
PSMC3-206ENST00000529500 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
PSMC3-206ENST00000529500 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
PSMC3-206ENST00000529500 TEX14Q8IWB6 1497 aa21.2■□□□□ 0.98
PSMC3-206ENST00000529500 CDK11AQ9UQ88 783 aaPredicted RBP21.17■□□□□ 0.98
PSMC3-206ENST00000529500 KDM6BO15054 1643 aa21.15■□□□□ 0.98
PSMC3-206ENST00000529500 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
PSMC3-206ENST00000529500 MAP3K1Q13233 1512 aa21.13■□□□□ 0.97
PSMC3-206ENST00000529500 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
PSMC3-206ENST00000529500 CFAP43Q8NDM7 1665 aa21.09■□□□□ 0.97
PSMC3-206ENST00000529500 ILDR1Q86SU0 546 aaPredicted RBP21.09■□□□□ 0.97
PSMC3-206ENST00000529500 PPRC1Q5VV67 1664 aaKnown RBP21.09■□□□□ 0.97
PSMC3-206ENST00000529500 PHLDB1Q86UU1 1377 aa21.08■□□□□ 0.96
PSMC3-206ENST00000529500 HECW1Q76N89 1606 aa21.04■□□□□ 0.96
PSMC3-206ENST00000529500 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
PSMC3-206ENST00000529500 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
PSMC3-206ENST00000529500 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
PSMC3-206ENST00000529500 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
PSMC3-206ENST00000529500 NEO1Q92859 1461 aa20.96■□□□□ 0.95
PSMC3-206ENST00000529500 FYCO1Q9BQS8 1478 aa20.96■□□□□ 0.95
PSMC3-206ENST00000529500 TIAM1Q13009 1591 aa20.96■□□□□ 0.95
PSMC3-206ENST00000529500 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
PSMC3-206ENST00000529500 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
PSMC3-206ENST00000529500 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
PSMC3-206ENST00000529500 TROQ12816 1431 aaPredicted RBP20.94■□□□□ 0.94
PSMC3-206ENST00000529500 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
PSMC3-206ENST00000529500 EFCAB2Q5VUJ9 269 aa20.92■□□□□ 0.94
PSMC3-206ENST00000529500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.92■□□□□ 0.94
PSMC3-206ENST00000529500 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
PSMC3-206ENST00000529500 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.94
PSMC3-206ENST00000529500 PLCH2O75038 1416 aa20.89■□□□□ 0.94
PSMC3-206ENST00000529500 AKNAQ7Z591 1439 aa20.89■□□□□ 0.94
PSMC3-206ENST00000529500 CCER1Q8TC90 406 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms