RNA–Protein interactions for RNA: ENST00000529347.1

CDKL1-206, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-206ENST00000529347 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
CDKL1-206ENST00000529347 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
CDKL1-206ENST00000529347 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
CDKL1-206ENST00000529347 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
CDKL1-206ENST00000529347 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
CDKL1-206ENST00000529347 EHMT2Q96KQ7 1210 aa23.34■■□□□ 1.33
CDKL1-206ENST00000529347 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
CDKL1-206ENST00000529347 IQGAP2Q13576 1575 aa23.32■■□□□ 1.32
CDKL1-206ENST00000529347 KIF21BO75037 1637 aa23.31■■□□□ 1.32
CDKL1-206ENST00000529347 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
CDKL1-206ENST00000529347 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
CDKL1-206ENST00000529347 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
CDKL1-206ENST00000529347 CYB5RLQ6IPT4 315 aa23.23■■□□□ 1.31
CDKL1-206ENST00000529347 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
CDKL1-206ENST00000529347 UGGT2Q9NYU1 1516 aa23.15■■□□□ 1.3
CDKL1-206ENST00000529347 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
CDKL1-206ENST00000529347 TTBK1Q5TCY1 1321 aaPredicted RBP23.14■■□□□ 1.3
CDKL1-206ENST00000529347 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
CDKL1-206ENST00000529347 CARMIL2Q6F5E8 1435 aa23.13■■□□□ 1.29
CDKL1-206ENST00000529347 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
CDKL1-206ENST00000529347 KIAA0556O60303 1618 aa23.1■■□□□ 1.29
CDKL1-206ENST00000529347 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
CDKL1-206ENST00000529347 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
CDKL1-206ENST00000529347 PTPRGP23470 1445 aa23.01■■□□□ 1.27
CDKL1-206ENST00000529347 SAMD9Q5K651 1589 aa22.99■■□□□ 1.27
CDKL1-206ENST00000529347 ADCY10Q96PN6 1610 aa22.93■■□□□ 1.26
CDKL1-206ENST00000529347 EFCAB5A4FU69 1503 aa22.91■■□□□ 1.26
CDKL1-206ENST00000529347 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
CDKL1-206ENST00000529347 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
CDKL1-206ENST00000529347 UACAQ9BZF9 1416 aa22.86■■□□□ 1.25
CDKL1-206ENST00000529347 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
CDKL1-206ENST00000529347 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
CDKL1-206ENST00000529347 ABCC2Q92887 1545 aa22.83■■□□□ 1.25
CDKL1-206ENST00000529347 NPM1P06748 294 aaKnown RBP eCLIP22.82■■□□□ 1.24
CDKL1-206ENST00000529347 ABCA8O94911 1581 aa22.8■■□□□ 1.24
CDKL1-206ENST00000529347 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
CDKL1-206ENST00000529347 CLIP1P30622 1438 aa22.78■■□□□ 1.24
CDKL1-206ENST00000529347 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
CDKL1-206ENST00000529347 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
CDKL1-206ENST00000529347 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
CDKL1-206ENST00000529347 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
CDKL1-206ENST00000529347 CEP162Q5TB80 1403 aa22.73■■□□□ 1.23
CDKL1-206ENST00000529347 KDM5BQ9UGL1 1544 aa22.7■■□□□ 1.22
CDKL1-206ENST00000529347 MAPKBP1O60336 1514 aa22.68■■□□□ 1.22
CDKL1-206ENST00000529347 FMN1Q68DA7 1419 aa22.68■■□□□ 1.22
CDKL1-206ENST00000529347 ATP1B4Q9UN42 357 aaPredicted RBP22.67■■□□□ 1.22
CDKL1-206ENST00000529347 KIF13AQ9H1H9 1805 aa22.64■■□□□ 1.22
CDKL1-206ENST00000529347 NUP153P49790 1475 aaKnown RBP22.64■■□□□ 1.21
CDKL1-206ENST00000529347 ASXL2Q76L83 1435 aa22.64■■□□□ 1.21
CDKL1-206ENST00000529347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
CDKL1-206ENST00000529347 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
CDKL1-206ENST00000529347 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
CDKL1-206ENST00000529347 ATP10BO94823 1461 aa22.61■■□□□ 1.21
CDKL1-206ENST00000529347 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
CDKL1-206ENST00000529347 LRRIQ1Q96JM4 1722 aa22.58■■□□□ 1.21
CDKL1-206ENST00000529347 DIP2BQ9P265 1576 aa22.58■■□□□ 1.2
CDKL1-206ENST00000529347 CDK13Q14004 1512 aaKnown RBP22.57■■□□□ 1.2
CDKL1-206ENST00000529347 ABCC10Q5T3U5 1492 aa22.56■■□□□ 1.2
CDKL1-206ENST00000529347 FAM69CQ0P6D2 419 aa22.55■■□□□ 1.2
CDKL1-206ENST00000529347 WDR7Q9Y4E6 1490 aa22.54■■□□□ 1.2
CDKL1-206ENST00000529347 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
CDKL1-206ENST00000529347 CASKIN1Q8WXD9 1431 aa22.53■■□□□ 1.2
CDKL1-206ENST00000529347 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
CDKL1-206ENST00000529347 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
CDKL1-206ENST00000529347 FYCO1Q9BQS8 1478 aa22.51■■□□□ 1.19
CDKL1-206ENST00000529347 PLEKHD1A6NEE1 506 aa22.44■■□□□ 1.18
CDKL1-206ENST00000529347 GLI2P10070 1586 aa22.44■■□□□ 1.18
CDKL1-206ENST00000529347 CCDC18Q5T9S5 1454 aa22.44■■□□□ 1.18
CDKL1-206ENST00000529347 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
CDKL1-206ENST00000529347 MAP3K4Q9Y6R4 1608 aa22.4■■□□□ 1.18
CDKL1-206ENST00000529347 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.17
CDKL1-206ENST00000529347 CDK11AQ9UQ88 783 aaPredicted RBP22.38■■□□□ 1.17
CDKL1-206ENST00000529347 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
CDKL1-206ENST00000529347 ABCA9Q8IUA7 1624 aa22.34■■□□□ 1.17
CDKL1-206ENST00000529347 KIF14Q15058 1648 aa22.33■■□□□ 1.17
CDKL1-206ENST00000529347 CD109Q6YHK3 1445 aa22.32■■□□□ 1.16
CDKL1-206ENST00000529347 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
CDKL1-206ENST00000529347 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
CDKL1-206ENST00000529347 TTC37Q6PGP7 1564 aa22.31■■□□□ 1.16
CDKL1-206ENST00000529347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDKL1-206ENST00000529347 TIAM1Q13009 1591 aa22.27■■□□□ 1.16
CDKL1-206ENST00000529347 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
CDKL1-206ENST00000529347 TEX14Q8IWB6 1497 aa22.25■■□□□ 1.15
CDKL1-206ENST00000529347 MYO5CQ9NQX4 1742 aa22.24■■□□□ 1.15
CDKL1-206ENST00000529347 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
CDKL1-206ENST00000529347 KDM6BO15054 1643 aa22.2■■□□□ 1.15
CDKL1-206ENST00000529347 APLP2Q06481 763 aa22.2■■□□□ 1.14
CDKL1-206ENST00000529347 CDC42BPAQ5VT25 1732 aa22.16■■□□□ 1.14
CDKL1-206ENST00000529347 SUPT6HQ7KZ85 1726 aaKnown RBP22.15■■□□□ 1.14
CDKL1-206ENST00000529347 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.14
CDKL1-206ENST00000529347 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
CDKL1-206ENST00000529347 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
CDKL1-206ENST00000529347 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.13
CDKL1-206ENST00000529347 FANCAO15360 1455 aa22.13■■□□□ 1.13
CDKL1-206ENST00000529347 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
CDKL1-206ENST00000529347 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
CDKL1-206ENST00000529347 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
CDKL1-206ENST00000529347 PLCH2O75038 1416 aa22.12■■□□□ 1.13
CDKL1-206ENST00000529347 NEO1Q92859 1461 aa22.09■■□□□ 1.13
CDKL1-206ENST00000529347 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms