RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
CCDC90B-212ENST00000529312 ABCA5Q8WWZ7 1642 aa13.49□□□□□ -0.25
CCDC90B-212ENST00000529312 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
CCDC90B-212ENST00000529312 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
CCDC90B-212ENST00000529312 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
CCDC90B-212ENST00000529312 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
CCDC90B-212ENST00000529312 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
CCDC90B-212ENST00000529312 JPH4Q96JJ6 628 aa13.46□□□□□ -0.25
CCDC90B-212ENST00000529312 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
CCDC90B-212ENST00000529312 NUP160Q12769 1436 aa13.43□□□□□ -0.26
CCDC90B-212ENST00000529312 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
CCDC90B-212ENST00000529312 IGF1RP08069 1367 aa13.42□□□□□ -0.26
CCDC90B-212ENST00000529312 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
CCDC90B-212ENST00000529312 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCDC90B-212ENST00000529312 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
CCDC90B-212ENST00000529312 PRG4Q92954 1404 aaPredicted RBP13.35□□□□□ -0.27
CCDC90B-212ENST00000529312 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
CCDC90B-212ENST00000529312 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
CCDC90B-212ENST00000529312 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-212ENST00000529312 KIAA0586Q9BVV6 1533 aa13.29□□□□□ -0.28
CCDC90B-212ENST00000529312 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
CCDC90B-212ENST00000529312 ERCC6L2Q5T890 1561 aa13.25□□□□□ -0.29
CCDC90B-212ENST00000529312 CUL7Q14999 1698 aa13.24□□□□□ -0.29
CCDC90B-212ENST00000529312 CARMIL2Q6F5E8 1435 aa13.23□□□□□ -0.29
CCDC90B-212ENST00000529312 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
CCDC90B-212ENST00000529312 PTPRGP23470 1445 aa13.22□□□□□ -0.29
CCDC90B-212ENST00000529312 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
CCDC90B-212ENST00000529312 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
CCDC90B-212ENST00000529312 TTBK1Q5TCY1 1321 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-212ENST00000529312 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
CCDC90B-212ENST00000529312 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
CCDC90B-212ENST00000529312 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
CCDC90B-212ENST00000529312 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
CCDC90B-212ENST00000529312 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-212ENST00000529312 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
CCDC90B-212ENST00000529312 IQGAP2Q13576 1575 aa13.09□□□□□ -0.31
CCDC90B-212ENST00000529312 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
CCDC90B-212ENST00000529312 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
CCDC90B-212ENST00000529312 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
CCDC90B-212ENST00000529312 GOLGA3Q08378 1498 aa13.04□□□□□ -0.32
CCDC90B-212ENST00000529312 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
CCDC90B-212ENST00000529312 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
CCDC90B-212ENST00000529312 PLB1Q6P1J6 1458 aa13.04□□□□□ -0.32
CCDC90B-212ENST00000529312 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
CCDC90B-212ENST00000529312 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
CCDC90B-212ENST00000529312 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
CCDC90B-212ENST00000529312 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.32
CCDC90B-212ENST00000529312 EEA1Q15075 1411 aa13.02□□□□□ -0.33
CCDC90B-212ENST00000529312 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
CCDC90B-212ENST00000529312 KIF13AQ9H1H9 1805 aa12.97□□□□□ -0.33
CCDC90B-212ENST00000529312 P3H3Q8IVL6 736 aa12.97□□□□□ -0.33
CCDC90B-212ENST00000529312 KDM5BQ9UGL1 1544 aa12.96□□□□□ -0.33
CCDC90B-212ENST00000529312 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
CCDC90B-212ENST00000529312 DIP2BQ9P265 1576 aa12.94□□□□□ -0.34
CCDC90B-212ENST00000529312 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
CCDC90B-212ENST00000529312 GLI2P10070 1586 aa12.91□□□□□ -0.34
CCDC90B-212ENST00000529312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-212ENST00000529312 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-212ENST00000529312 UBTFP17480 764 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-212ENST00000529312 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-212ENST00000529312 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
CCDC90B-212ENST00000529312 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-212ENST00000529312 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
CCDC90B-212ENST00000529312 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
CCDC90B-212ENST00000529312 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
CCDC90B-212ENST00000529312 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
CCDC90B-212ENST00000529312 KDM6BO15054 1643 aa12.85□□□□□ -0.35
CCDC90B-212ENST00000529312 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
CCDC90B-212ENST00000529312 CD109Q6YHK3 1445 aa12.85□□□□□ -0.35
CCDC90B-212ENST00000529312 ABCA8O94911 1581 aa12.84□□□□□ -0.35
CCDC90B-212ENST00000529312 ZCCHC11Q5TAX3 1644 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-212ENST00000529312 ATP10BO94823 1461 aa12.82□□□□□ -0.36
CCDC90B-212ENST00000529312 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
CCDC90B-212ENST00000529312 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
CCDC90B-212ENST00000529312 POTEHQ6S545 545 aa12.79□□□□□ -0.36
CCDC90B-212ENST00000529312 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
CCDC90B-212ENST00000529312 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
CCDC90B-212ENST00000529312 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-212ENST00000529312 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-212ENST00000529312 MAP3K4Q9Y6R4 1608 aa12.76□□□□□ -0.37
CCDC90B-212ENST00000529312 KIF21BO75037 1637 aa12.75□□□□□ -0.37
CCDC90B-212ENST00000529312 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
CCDC90B-212ENST00000529312 COL17A1Q9UMD9 1497 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-212ENST00000529312 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
CCDC90B-212ENST00000529312 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
CCDC90B-212ENST00000529312 PPRC1Q5VV67 1664 aaKnown RBP12.72□□□□□ -0.37
CCDC90B-212ENST00000529312 CFAP43Q8NDM7 1665 aa12.72□□□□□ -0.37
CCDC90B-212ENST00000529312 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
CCDC90B-212ENST00000529312 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
CCDC90B-212ENST00000529312 NUP153P49790 1475 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-212ENST00000529312 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
CCDC90B-212ENST00000529312 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
CCDC90B-212ENST00000529312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC90B-212ENST00000529312 NEO1Q92859 1461 aa12.66□□□□□ -0.38
CCDC90B-212ENST00000529312 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
CCDC90B-212ENST00000529312 ABCA9Q8IUA7 1624 aa12.64□□□□□ -0.39
CCDC90B-212ENST00000529312 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-212ENST00000529312 ADGRL1O94910 1474 aa12.62□□□□□ -0.39
CCDC90B-212ENST00000529312 AKNAQ7Z591 1439 aa12.62□□□□□ -0.39
CCDC90B-212ENST00000529312 ARHGAP35Q9NRY4 1499 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms