RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 FBLN2P98095 1184 aa36.55■■■■□ 3.44
LTBP3-212ENST00000529189 RANGAP1P46060 587 aaPredicted RBP36.48■■■■□ 3.43
LTBP3-212ENST00000529189 CHD1O14646 1710 aa36.48■■■■□ 3.43
LTBP3-212ENST00000529189 TRIM26Q12899 539 aaPredicted RBP36.47■■■■□ 3.43
LTBP3-212ENST00000529189 CLIP1P30622 1438 aa36.44■■■■□ 3.42
LTBP3-212ENST00000529189 CEP170Q5SW79 1584 aa36.42■■■■□ 3.42
LTBP3-212ENST00000529189 NUP160Q12769 1436 aa36.36■■■■□ 3.41
LTBP3-212ENST00000529189 IQGAP2Q13576 1575 aa36.34■■■■□ 3.41
LTBP3-212ENST00000529189 KIAA0586Q9BVV6 1533 aa36.31■■■■□ 3.4
LTBP3-212ENST00000529189 ARHGAP35Q9NRY4 1499 aa36.26■■■■□ 3.39
LTBP3-212ENST00000529189 EFCAB5A4FU69 1503 aa36.18■■■■□ 3.38
LTBP3-212ENST00000529189 ARAP1Q96P48 1450 aa36.18■■■■□ 3.38
LTBP3-212ENST00000529189 SAMD9Q5K651 1589 aa36.14■■■■□ 3.38
LTBP3-212ENST00000529189 UGGT2Q9NYU1 1516 aa36.14■■■■□ 3.38
LTBP3-212ENST00000529189 P3H3Q8IVL6 736 aa36.09■■■■□ 3.37
LTBP3-212ENST00000529189 PPARGC1BQ86YN6 1023 aaKnown RBP36.07■■■■□ 3.37
LTBP3-212ENST00000529189 VPS8Q8N3P4 1428 aa36.07■■■■□ 3.36
LTBP3-212ENST00000529189 FHOD3Q2V2M9 1422 aa36.05■■■■□ 3.36
LTBP3-212ENST00000529189 CLASP1Q7Z460 1538 aa36.04■■■■□ 3.36
LTBP3-212ENST00000529189 JPH4Q96JJ6 628 aa36.01■■■■□ 3.36
LTBP3-212ENST00000529189 DISP1Q96F81 1524 aa36■■■■□ 3.35
LTBP3-212ENST00000529189 KIAA0556O60303 1618 aa35.99■■■■□ 3.35
LTBP3-212ENST00000529189 HRCP23327 699 aa35.96■■■■□ 3.35
LTBP3-212ENST00000529189 SHROOM2Q13796 1616 aa35.95■■■■□ 3.35
LTBP3-212ENST00000529189 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
LTBP3-212ENST00000529189 PRG4Q92954 1404 aaPredicted RBP35.88■■■■□ 3.33
LTBP3-212ENST00000529189 CARMIL2Q6F5E8 1435 aa35.87■■■■□ 3.33
LTBP3-212ENST00000529189 FMN1Q68DA7 1419 aa35.82■■■■□ 3.33
LTBP3-212ENST00000529189 PCF11O94913 1555 aaKnown RBP35.8■■■■□ 3.32
LTBP3-212ENST00000529189 ERCC6L2Q5T890 1561 aa35.77■■■■□ 3.32
LTBP3-212ENST00000529189 TTBK1Q5TCY1 1321 aaPredicted RBP35.74■■■■□ 3.31
LTBP3-212ENST00000529189 APLP2Q06481 763 aa35.72■■■■□ 3.31
LTBP3-212ENST00000529189 CASKIN1Q8WXD9 1431 aa35.7■■■■□ 3.3
LTBP3-212ENST00000529189 FYCO1Q9BQS8 1478 aa35.69■■■■□ 3.3
LTBP3-212ENST00000529189 ATP1B4Q9UN42 357 aaPredicted RBP35.62■■■■□ 3.29
LTBP3-212ENST00000529189 PTPRGP23470 1445 aa35.58■■■■□ 3.29
LTBP3-212ENST00000529189 RAPGEF6Q8TEU7 1601 aa35.56■■■■□ 3.28
LTBP3-212ENST00000529189 HECW1Q76N89 1606 aa35.55■■■■□ 3.28
LTBP3-212ENST00000529189 PLB1Q6P1J6 1458 aa35.55■■■■□ 3.28
LTBP3-212ENST00000529189 LRRIQ1Q96JM4 1722 aa35.53■■■■□ 3.28
LTBP3-212ENST00000529189 TIAM1Q13009 1591 aa35.51■■■■□ 3.28
LTBP3-212ENST00000529189 CFAP43Q8NDM7 1665 aa35.5■■■■□ 3.27
LTBP3-212ENST00000529189 ABCA8O94911 1581 aa35.49■■■■□ 3.27
LTBP3-212ENST00000529189 MAP3K1Q13233 1512 aa35.47■■■■□ 3.27
LTBP3-212ENST00000529189 NUP153P49790 1475 aaKnown RBP35.46■■■■□ 3.27
LTBP3-212ENST00000529189 EPRSP07814 1512 aaKnown RBP35.42■■■■□ 3.26
LTBP3-212ENST00000529189 CCDC18Q5T9S5 1454 aa35.41■■■■□ 3.26
LTBP3-212ENST00000529189 ARID3CA6NKF2 412 aa35.4■■■■□ 3.26
LTBP3-212ENST00000529189 KANK4Q5T7N3 995 aaPredicted RBP35.4■■■■□ 3.26
LTBP3-212ENST00000529189 CDK13Q14004 1512 aaKnown RBP35.39■■■■□ 3.26
LTBP3-212ENST00000529189 UACAQ9BZF9 1416 aa35.37■■■■□ 3.25
LTBP3-212ENST00000529189 ARHGEF11O15085 1522 aa35.36■■■■□ 3.25
LTBP3-212ENST00000529189 LRRC9Q6ZRR7 1453 aa35.33■■■■□ 3.25
LTBP3-212ENST00000529189 ABCC2Q92887 1545 aa35.3■■■■□ 3.24
LTBP3-212ENST00000529189 RIMBP3CA6NJZ7 1639 aa35.25■■■■□ 3.23
LTBP3-212ENST00000529189 RIMBP3BA6NNM3 1639 aa35.25■■■■□ 3.23
LTBP3-212ENST00000529189 RIMBP3Q9UFD9 1639 aa35.25■■■■□ 3.23
LTBP3-212ENST00000529189 ZEB1P37275 1124 aaPredicted RBP35.24■■■■□ 3.23
LTBP3-212ENST00000529189 MAGI3Q5TCQ9 1506 aa35.23■■■■□ 3.23
LTBP3-212ENST00000529189 UHRF1BP1LA0JNW5 1464 aa35.23■■■■□ 3.23
LTBP3-212ENST00000529189 ATP10BO94823 1461 aa35.22■■■■□ 3.23
LTBP3-212ENST00000529189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.22■■■■□ 3.23
LTBP3-212ENST00000529189 HNRNPUL2Q1KMD3 747 aaKnown RBP35.22■■■■□ 3.23
LTBP3-212ENST00000529189 MTUS2Q5JR59 1369 aa35.2■■■■□ 3.23
LTBP3-212ENST00000529189 ADCY10Q96PN6 1610 aa35.19■■■■□ 3.22
LTBP3-212ENST00000529189 EHBP1L1Q8N3D4 1523 aa35.18■■■■□ 3.22
LTBP3-212ENST00000529189 ZCCHC11Q5TAX3 1644 aaKnown RBP35.09■■■■□ 3.21
LTBP3-212ENST00000529189 KDM5BQ9UGL1 1544 aa35.09■■■■□ 3.21
LTBP3-212ENST00000529189 CDK11AQ9UQ88 783 aaPredicted RBP35.09■■■■□ 3.21
LTBP3-212ENST00000529189 SUPT6HQ7KZ85 1726 aaKnown RBP35.06■■■■□ 3.2
LTBP3-212ENST00000529189 RRBP1Q9P2E9 1410 aaKnown RBP35.06■■■■□ 3.2
LTBP3-212ENST00000529189 TROQ12816 1431 aaPredicted RBP35.03■■■■□ 3.2
LTBP3-212ENST00000529189 NCOA2Q15596 1464 aa35.01■■■■□ 3.2
LTBP3-212ENST00000529189 CYB5RLQ6IPT4 315 aa35■■■■□ 3.19
LTBP3-212ENST00000529189 PLEKHD1A6NEE1 506 aa34.98■■■■□ 3.19
LTBP3-212ENST00000529189 CCER1Q8TC90 406 aaPredicted RBP34.98■■■■□ 3.19
LTBP3-212ENST00000529189 PHLDB1Q86UU1 1377 aa34.98■■■■□ 3.19
LTBP3-212ENST00000529189 KIF14Q15058 1648 aa34.94■■■■□ 3.18
LTBP3-212ENST00000529189 CCNB3Q8WWL7 1395 aa34.91■■■■□ 3.18
LTBP3-212ENST00000529189 NPM1P06748 294 aaKnown RBP eCLIP34.83■■■■□ 3.17
LTBP3-212ENST00000529189 MYOM3Q5VTT5 1437 aa34.82■■■■□ 3.16
LTBP3-212ENST00000529189 WDR7Q9Y4E6 1490 aa34.79■■■■□ 3.16
LTBP3-212ENST00000529189 ASXL2Q76L83 1435 aa34.78■■■■□ 3.16
LTBP3-212ENST00000529189 FGD6Q6ZV73 1430 aa34.77■■■■□ 3.16
LTBP3-212ENST00000529189 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
LTBP3-212ENST00000529189 KCNH8Q96L42 1107 aa34.74■■■■□ 3.15
LTBP3-212ENST00000529189 TTC37Q6PGP7 1564 aa34.71■■■■□ 3.15
LTBP3-212ENST00000529189 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.71■■■■□ 3.15
LTBP3-212ENST00000529189 ITSN2Q9NZM3 1697 aa34.7■■■■□ 3.15
LTBP3-212ENST00000529189 GPATCH8Q9UKJ3 1502 aaKnown RBP34.69■■■■□ 3.14
LTBP3-212ENST00000529189 CDC42BPAQ5VT25 1732 aa34.68■■■■□ 3.14
LTBP3-212ENST00000529189 PTPN23Q9H3S7 1636 aa34.66■■■■□ 3.14
LTBP3-212ENST00000529189 MAPKBP1O60336 1514 aa34.65■■■■□ 3.14
LTBP3-212ENST00000529189 MIA2Q96PC5 1412 aa34.65■■■■□ 3.14
LTBP3-212ENST00000529189 FAM50AQ14320 339 aaKnown RBP34.64■■■■□ 3.14
LTBP3-212ENST00000529189 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
LTBP3-212ENST00000529189 PREX2Q70Z35 1606 aa34.59■■■■□ 3.13
LTBP3-212ENST00000529189 TCOF1Q13428 1488 aaKnown RBP34.58■■■■□ 3.13
LTBP3-212ENST00000529189 MYO5CQ9NQX4 1742 aa34.58■■■■□ 3.13
LTBP3-212ENST00000529189 CFDP1Q9UEE9 299 aaPredicted RBP34.57■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms