RNA–Protein interactions for RNA: ENST00000529178.1

SCYL1-210, Transcript of SCY1 like pseudokinase 1, humanhuman

TSL 2

Gene SCYL1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL1-210ENST00000529178 SHROOM2Q13796 1616 aa24.49■■□□□ 1.51
SCYL1-210ENST00000529178 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
SCYL1-210ENST00000529178 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
SCYL1-210ENST00000529178 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
SCYL1-210ENST00000529178 PRXQ9BXM0 1461 aa24.45■■□□□ 1.5
SCYL1-210ENST00000529178 EEA1Q15075 1411 aa24.43■■□□□ 1.5
SCYL1-210ENST00000529178 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.5
SCYL1-210ENST00000529178 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
SCYL1-210ENST00000529178 IQGAP2Q13576 1575 aa24.26■■□□□ 1.47
SCYL1-210ENST00000529178 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
SCYL1-210ENST00000529178 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.47
SCYL1-210ENST00000529178 CARMIL2Q6F5E8 1435 aa24.19■■□□□ 1.46
SCYL1-210ENST00000529178 DISP1Q96F81 1524 aa24.17■■□□□ 1.46
SCYL1-210ENST00000529178 TNIKQ9UKE5 1360 aa24.15■■□□□ 1.46
SCYL1-210ENST00000529178 CTTNBP2Q8WZ74 1663 aa24.14■■□□□ 1.45
SCYL1-210ENST00000529178 PTPRGP23470 1445 aa24.12■■□□□ 1.45
SCYL1-210ENST00000529178 KIF21BO75037 1637 aa24.11■■□□□ 1.45
SCYL1-210ENST00000529178 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
SCYL1-210ENST00000529178 KIAA0556O60303 1618 aa24.03■■□□□ 1.44
SCYL1-210ENST00000529178 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
SCYL1-210ENST00000529178 ADCY10Q96PN6 1610 aa23.97■■□□□ 1.43
SCYL1-210ENST00000529178 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
SCYL1-210ENST00000529178 UACAQ9BZF9 1416 aa23.96■■□□□ 1.43
SCYL1-210ENST00000529178 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
SCYL1-210ENST00000529178 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
SCYL1-210ENST00000529178 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
SCYL1-210ENST00000529178 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
SCYL1-210ENST00000529178 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
SCYL1-210ENST00000529178 ABCC2Q92887 1545 aa23.88■■□□□ 1.41
SCYL1-210ENST00000529178 MAPKBP1O60336 1514 aa23.86■■□□□ 1.41
SCYL1-210ENST00000529178 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
SCYL1-210ENST00000529178 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
SCYL1-210ENST00000529178 PLB1Q6P1J6 1458 aa23.83■■□□□ 1.41
SCYL1-210ENST00000529178 ABCA8O94911 1581 aa23.82■■□□□ 1.4
SCYL1-210ENST00000529178 RANGAP1P46060 587 aaPredicted RBP23.81■■□□□ 1.4
SCYL1-210ENST00000529178 EFCAB5A4FU69 1503 aa23.79■■□□□ 1.4
SCYL1-210ENST00000529178 ABCC10Q5T3U5 1492 aa23.78■■□□□ 1.4
SCYL1-210ENST00000529178 FHOD3Q2V2M9 1422 aa23.75■■□□□ 1.39
SCYL1-210ENST00000529178 FAM69CQ0P6D2 419 aa23.73■■□□□ 1.39
SCYL1-210ENST00000529178 ASXL2Q76L83 1435 aa23.72■■□□□ 1.39
SCYL1-210ENST00000529178 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
SCYL1-210ENST00000529178 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
SCYL1-210ENST00000529178 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
SCYL1-210ENST00000529178 ATP10BO94823 1461 aa23.67■■□□□ 1.38
SCYL1-210ENST00000529178 DIP2BQ9P265 1576 aa23.66■■□□□ 1.38
SCYL1-210ENST00000529178 RAPGEF6Q8TEU7 1601 aa23.64■■□□□ 1.38
SCYL1-210ENST00000529178 GLI2P10070 1586 aa23.61■■□□□ 1.37
SCYL1-210ENST00000529178 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
SCYL1-210ENST00000529178 NUP153P49790 1475 aaKnown RBP23.61■■□□□ 1.37
SCYL1-210ENST00000529178 EPRSP07814 1512 aaKnown RBP23.6■■□□□ 1.37
SCYL1-210ENST00000529178 WDR7Q9Y4E6 1490 aa23.59■■□□□ 1.37
SCYL1-210ENST00000529178 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
SCYL1-210ENST00000529178 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
SCYL1-210ENST00000529178 CLIP1P30622 1438 aa23.55■■□□□ 1.36
SCYL1-210ENST00000529178 KCNH8Q96L42 1107 aa23.51■■□□□ 1.35
SCYL1-210ENST00000529178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.5■■□□□ 1.35
SCYL1-210ENST00000529178 HNRNPUL2Q1KMD3 747 aaKnown RBP23.5■■□□□ 1.35
SCYL1-210ENST00000529178 PLEKHD1A6NEE1 506 aa23.49■■□□□ 1.35
SCYL1-210ENST00000529178 MAP3K4Q9Y6R4 1608 aa23.45■■□□□ 1.34
SCYL1-210ENST00000529178 CASKIN1Q8WXD9 1431 aa23.44■■□□□ 1.34
SCYL1-210ENST00000529178 CEP162Q5TB80 1403 aa23.43■■□□□ 1.34
SCYL1-210ENST00000529178 ATP1B4Q9UN42 357 aaPredicted RBP23.42■■□□□ 1.34
SCYL1-210ENST00000529178 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
SCYL1-210ENST00000529178 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
SCYL1-210ENST00000529178 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
SCYL1-210ENST00000529178 TSPOAP1O95153 1857 aa23.4■■□□□ 1.34
SCYL1-210ENST00000529178 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
SCYL1-210ENST00000529178 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
SCYL1-210ENST00000529178 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
SCYL1-210ENST00000529178 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
SCYL1-210ENST00000529178 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
SCYL1-210ENST00000529178 TEX14Q8IWB6 1497 aa23.34■■□□□ 1.33
SCYL1-210ENST00000529178 FYCO1Q9BQS8 1478 aa23.33■■□□□ 1.33
SCYL1-210ENST00000529178 PCF11O94913 1555 aaKnown RBP23.31■■□□□ 1.32
SCYL1-210ENST00000529178 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
SCYL1-210ENST00000529178 CCDC18Q5T9S5 1454 aa23.3■■□□□ 1.32
SCYL1-210ENST00000529178 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
SCYL1-210ENST00000529178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.27■■□□□ 1.32
SCYL1-210ENST00000529178 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.31
SCYL1-210ENST00000529178 TROQ12816 1431 aaPredicted RBP23.26■■□□□ 1.31
SCYL1-210ENST00000529178 KDM6BO15054 1643 aa23.25■■□□□ 1.31
SCYL1-210ENST00000529178 ARAP3Q8WWN8 1544 aa23.19■■□□□ 1.3
SCYL1-210ENST00000529178 NEO1Q92859 1461 aa23.19■■□□□ 1.3
SCYL1-210ENST00000529178 PLCH2O75038 1416 aa23.19■■□□□ 1.3
SCYL1-210ENST00000529178 VPS8Q8N3P4 1428 aa23.18■■□□□ 1.3
SCYL1-210ENST00000529178 TTC37Q6PGP7 1564 aa23.16■■□□□ 1.3
SCYL1-210ENST00000529178 KIF14Q15058 1648 aa23.13■■□□□ 1.29
SCYL1-210ENST00000529178 AKNAQ7Z591 1439 aa23.11■■□□□ 1.29
SCYL1-210ENST00000529178 FANCAO15360 1455 aa23.11■■□□□ 1.29
SCYL1-210ENST00000529178 EFCAB2Q5VUJ9 269 aa23.1■■□□□ 1.29
SCYL1-210ENST00000529178 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
SCYL1-210ENST00000529178 RAPGEF3O95398 923 aa23.05■■□□□ 1.28
SCYL1-210ENST00000529178 MAP3K1Q13233 1512 aa23.04■■□□□ 1.28
SCYL1-210ENST00000529178 MYO5CQ9NQX4 1742 aa23.03■■□□□ 1.28
SCYL1-210ENST00000529178 CFAP74Q9C0B2 1584 aa23.03■■□□□ 1.28
SCYL1-210ENST00000529178 DENND4BO75064 1496 aaPredicted RBP23.01■■□□□ 1.27
SCYL1-210ENST00000529178 GPATCH8Q9UKJ3 1502 aaKnown RBP23.01■■□□□ 1.27
SCYL1-210ENST00000529178 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
SCYL1-210ENST00000529178 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
SCYL1-210ENST00000529178 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms