RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 KCNA4P22459 653 aa12.14□□□□□ -0.47
C11orf88-203ENST00000529167 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
C11orf88-203ENST00000529167 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
C11orf88-203ENST00000529167 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
C11orf88-203ENST00000529167 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
C11orf88-203ENST00000529167 SOGA1O94964 1423 aa12.09□□□□□ -0.47
C11orf88-203ENST00000529167 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
C11orf88-203ENST00000529167 ILDR1Q86SU0 546 aaPredicted RBP12.08□□□□□ -0.48
C11orf88-203ENST00000529167 TDRD9Q8NDG6 1382 aaKnown RBP12.08□□□□□ -0.48
C11orf88-203ENST00000529167 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
C11orf88-203ENST00000529167 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
C11orf88-203ENST00000529167 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
C11orf88-203ENST00000529167 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
C11orf88-203ENST00000529167 PLEKHG5O94827 1062 aa12.06□□□□□ -0.48
C11orf88-203ENST00000529167 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
C11orf88-203ENST00000529167 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.49
C11orf88-203ENST00000529167 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
C11orf88-203ENST00000529167 LOC105371045A0A1W2PR82 267 aa12.01□□□□□ -0.49
C11orf88-203ENST00000529167 SHROOM2Q13796 1616 aa12□□□□□ -0.49
C11orf88-203ENST00000529167 CEP170Q5SW79 1584 aa11.98□□□□□ -0.49
C11orf88-203ENST00000529167 CLSPNQ9HAW4 1339 aa11.97□□□□□ -0.49
C11orf88-203ENST00000529167 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.49
C11orf88-203ENST00000529167 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
C11orf88-203ENST00000529167 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
C11orf88-203ENST00000529167 CUX1P39880 1505 aa11.96□□□□□ -0.5
C11orf88-203ENST00000529167 NUP160Q12769 1436 aa11.95□□□□□ -0.5
C11orf88-203ENST00000529167 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
C11orf88-203ENST00000529167 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
C11orf88-203ENST00000529167 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
C11orf88-203ENST00000529167 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
C11orf88-203ENST00000529167 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
C11orf88-203ENST00000529167 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
C11orf88-203ENST00000529167 ADAMTS12P58397 1594 aa11.89□□□□□ -0.51
C11orf88-203ENST00000529167 KDM6BO15054 1643 aa11.89□□□□□ -0.51
C11orf88-203ENST00000529167 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
C11orf88-203ENST00000529167 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
C11orf88-203ENST00000529167 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
C11orf88-203ENST00000529167 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
C11orf88-203ENST00000529167 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
C11orf88-203ENST00000529167 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
C11orf88-203ENST00000529167 ADCY10Q96PN6 1610 aa11.79□□□□□ -0.52
C11orf88-203ENST00000529167 ADGRL1O94910 1474 aa11.77□□□□□ -0.53
C11orf88-203ENST00000529167 ERICH3Q5RHP9 1530 aa11.77□□□□□ -0.53
C11orf88-203ENST00000529167 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
C11orf88-203ENST00000529167 AMER1Q5JTC6 1135 aaPredicted RBP11.74□□□□□ -0.53
C11orf88-203ENST00000529167 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
C11orf88-203ENST00000529167 YTHDC1Q96MU7 727 aaKnown RBP11.73□□□□□ -0.53
C11orf88-203ENST00000529167 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
C11orf88-203ENST00000529167 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
C11orf88-203ENST00000529167 PPRC1Q5VV67 1664 aaKnown RBP11.73□□□□□ -0.53
C11orf88-203ENST00000529167 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
C11orf88-203ENST00000529167 GLI2P10070 1586 aa11.71□□□□□ -0.53
C11orf88-203ENST00000529167 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
C11orf88-203ENST00000529167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.71□□□□□ -0.54
C11orf88-203ENST00000529167 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
C11orf88-203ENST00000529167 MIER1Q8N108 512 aa11.69□□□□□ -0.54
C11orf88-203ENST00000529167 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
C11orf88-203ENST00000529167 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
C11orf88-203ENST00000529167 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
C11orf88-203ENST00000529167 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
C11orf88-203ENST00000529167 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
C11orf88-203ENST00000529167 SALL2Q9Y467 1007 aaPredicted RBP11.64□□□□□ -0.55
C11orf88-203ENST00000529167 CCDC136Q96JN2 1154 aa11.64□□□□□ -0.55
C11orf88-203ENST00000529167 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
C11orf88-203ENST00000529167 ADRA2BP18089 450 aa11.62□□□□□ -0.55
C11orf88-203ENST00000529167 PLB1Q6P1J6 1458 aa11.61□□□□□ -0.55
C11orf88-203ENST00000529167 COL17A1Q9UMD9 1497 aaPredicted RBP11.61□□□□□ -0.55
C11orf88-203ENST00000529167 MAP3K4Q9Y6R4 1608 aa11.6□□□□□ -0.55
C11orf88-203ENST00000529167 PKNOX2Q96KN3 472 aa11.6□□□□□ -0.55
C11orf88-203ENST00000529167 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
C11orf88-203ENST00000529167 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
C11orf88-203ENST00000529167 ERICH6BQ5W0A0 696 aa11.59□□□□□ -0.55
C11orf88-203ENST00000529167 UHRF1BP1LA0JNW5 1464 aa11.58□□□□□ -0.56
C11orf88-203ENST00000529167 RBM19Q9Y4C8 960 aaKnown RBP11.57□□□□□ -0.56
C11orf88-203ENST00000529167 ASXL2Q76L83 1435 aa11.57□□□□□ -0.56
C11orf88-203ENST00000529167 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
C11orf88-203ENST00000529167 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
C11orf88-203ENST00000529167 MSH5O43196 834 aa11.53□□□□□ -0.56
C11orf88-203ENST00000529167 CUL7Q14999 1698 aa11.53□□□□□ -0.56
C11orf88-203ENST00000529167 PTPRGP23470 1445 aa11.53□□□□□ -0.56
C11orf88-203ENST00000529167 LMTK3Q96Q04 1460 aa11.5□□□□□ -0.57
C11orf88-203ENST00000529167 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
C11orf88-203ENST00000529167 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
C11orf88-203ENST00000529167 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
C11orf88-203ENST00000529167 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
C11orf88-203ENST00000529167 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
C11orf88-203ENST00000529167 UACAQ9BZF9 1416 aa11.46□□□□□ -0.57
C11orf88-203ENST00000529167 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.58
C11orf88-203ENST00000529167 CARMIL2Q6F5E8 1435 aa11.46□□□□□ -0.58
C11orf88-203ENST00000529167 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
C11orf88-203ENST00000529167 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
C11orf88-203ENST00000529167 ZCCHC11Q5TAX3 1644 aaKnown RBP11.44□□□□□ -0.58
C11orf88-203ENST00000529167 KIF21BO75037 1637 aa11.43□□□□□ -0.58
C11orf88-203ENST00000529167 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
C11orf88-203ENST00000529167 SOCS7O14512 581 aa11.42□□□□□ -0.58
C11orf88-203ENST00000529167 IGF1RP08069 1367 aa11.42□□□□□ -0.58
C11orf88-203ENST00000529167 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
C11orf88-203ENST00000529167 PTPRMP28827 1452 aa11.41□□□□□ -0.58
C11orf88-203ENST00000529167 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
C11orf88-203ENST00000529167 DISP1Q96F81 1524 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms