RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 CHMP7Q8WUX9 453 aaPredicted RBP11.07□□□□□ -0.64
NUP98-215ENST00000529063 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
NUP98-215ENST00000529063 ADAMTS12P58397 1594 aa11.04□□□□□ -0.64
NUP98-215ENST00000529063 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
NUP98-215ENST00000529063 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
NUP98-215ENST00000529063 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.64
NUP98-215ENST00000529063 GRIN2AQ12879 1464 aa11.02□□□□□ -0.65
NUP98-215ENST00000529063 SHROOM2Q13796 1616 aa11.01□□□□□ -0.65
NUP98-215ENST00000529063 TOP2BQ02880 1626 aa11□□□□□ -0.65
NUP98-215ENST00000529063 ZBTB22O15209 634 aa11□□□□□ -0.65
NUP98-215ENST00000529063 NUP160Q12769 1436 aa11□□□□□ -0.65
NUP98-215ENST00000529063 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
NUP98-215ENST00000529063 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
NUP98-215ENST00000529063 ERICH3Q5RHP9 1530 aa10.94□□□□□ -0.66
NUP98-215ENST00000529063 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
NUP98-215ENST00000529063 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
NUP98-215ENST00000529063 SUPT5HO00267 1087 aaKnown RBP10.9□□□□□ -0.66
NUP98-215ENST00000529063 PRG4Q92954 1404 aaPredicted RBP10.85□□□□□ -0.67
NUP98-215ENST00000529063 MSH5O43196 834 aa10.85□□□□□ -0.67
NUP98-215ENST00000529063 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
NUP98-215ENST00000529063 ADCY10Q96PN6 1610 aa10.83□□□□□ -0.68
NUP98-215ENST00000529063 DIP2BQ9P265 1576 aa10.82□□□□□ -0.68
NUP98-215ENST00000529063 MAPKBP1O60336 1514 aa10.8□□□□□ -0.68
NUP98-215ENST00000529063 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
NUP98-215ENST00000529063 ABCC10Q5T3U5 1492 aa10.79□□□□□ -0.68
NUP98-215ENST00000529063 CUL7Q14999 1698 aa10.77□□□□□ -0.69
NUP98-215ENST00000529063 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
NUP98-215ENST00000529063 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
NUP98-215ENST00000529063 IGF1RP08069 1367 aa10.73□□□□□ -0.69
NUP98-215ENST00000529063 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
NUP98-215ENST00000529063 KDM6BO15054 1643 aa10.72□□□□□ -0.69
NUP98-215ENST00000529063 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
NUP98-215ENST00000529063 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
NUP98-215ENST00000529063 KIF27Q86VH2 1401 aa10.7□□□□□ -0.7
NUP98-215ENST00000529063 PPRC1Q5VV67 1664 aaKnown RBP10.69□□□□□ -0.7
NUP98-215ENST00000529063 IQGAP2Q13576 1575 aa10.66□□□□□ -0.7
NUP98-215ENST00000529063 ABCC2Q92887 1545 aa10.65□□□□□ -0.7
NUP98-215ENST00000529063 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
NUP98-215ENST00000529063 PTPRGP23470 1445 aa10.64□□□□□ -0.71
NUP98-215ENST00000529063 GLI2P10070 1586 aa10.64□□□□□ -0.71
NUP98-215ENST00000529063 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
NUP98-215ENST00000529063 DISP1Q96F81 1524 aa10.63□□□□□ -0.71
NUP98-215ENST00000529063 KDM4FA0A1W2PPD8 638 aa10.63□□□□□ -0.71
NUP98-215ENST00000529063 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
NUP98-215ENST00000529063 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
NUP98-215ENST00000529063 ASXL2Q76L83 1435 aa10.62□□□□□ -0.71
NUP98-215ENST00000529063 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
NUP98-215ENST00000529063 CARMIL2Q6F5E8 1435 aa10.59□□□□□ -0.71
NUP98-215ENST00000529063 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
NUP98-215ENST00000529063 KIAA0556O60303 1618 aa10.59□□□□□ -0.71
NUP98-215ENST00000529063 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
NUP98-215ENST00000529063 PLB1Q6P1J6 1458 aa10.59□□□□□ -0.71
NUP98-215ENST00000529063 KDM5BQ9UGL1 1544 aa10.58□□□□□ -0.72
NUP98-215ENST00000529063 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
NUP98-215ENST00000529063 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
NUP98-215ENST00000529063 COL17A1Q9UMD9 1497 aaPredicted RBP10.57□□□□□ -0.72
NUP98-215ENST00000529063 EPRSP07814 1512 aaKnown RBP10.57□□□□□ -0.72
NUP98-215ENST00000529063 CTTNBP2Q8WZ74 1663 aa10.56□□□□□ -0.72
NUP98-215ENST00000529063 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
NUP98-215ENST00000529063 RAPGEF2Q9Y4G8 1499 aa10.55□□□□□ -0.72
NUP98-215ENST00000529063 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
NUP98-215ENST00000529063 ABCA8O94911 1581 aa10.5□□□□□ -0.73
NUP98-215ENST00000529063 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
NUP98-215ENST00000529063 HOXD11P31277 338 aaPredicted RBP10.49□□□□□ -0.73
NUP98-215ENST00000529063 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
NUP98-215ENST00000529063 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
NUP98-215ENST00000529063 HECW2Q9P2P5 1572 aa10.47□□□□□ -0.73
NUP98-215ENST00000529063 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
NUP98-215ENST00000529063 MAGI3Q5TCQ9 1506 aa10.45□□□□□ -0.74
NUP98-215ENST00000529063 SLC4A2P04920 1241 aa10.45□□□□□ -0.74
NUP98-215ENST00000529063 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
NUP98-215ENST00000529063 PRXQ9BXM0 1461 aa10.44□□□□□ -0.74
NUP98-215ENST00000529063 KIF21BO75037 1637 aa10.44□□□□□ -0.74
NUP98-215ENST00000529063 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
NUP98-215ENST00000529063 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
NUP98-215ENST00000529063 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
NUP98-215ENST00000529063 CD109Q6YHK3 1445 aa10.41□□□□□ -0.74
NUP98-215ENST00000529063 SAMD9Q5K651 1589 aa10.39□□□□□ -0.75
NUP98-215ENST00000529063 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
NUP98-215ENST00000529063 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
NUP98-215ENST00000529063 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
NUP98-215ENST00000529063 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
NUP98-215ENST00000529063 ATP10BO94823 1461 aa10.36□□□□□ -0.75
NUP98-215ENST00000529063 FRMPD1Q5SYB0 1578 aa10.36□□□□□ -0.75
NUP98-215ENST00000529063 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
NUP98-215ENST00000529063 RAPGEF6Q8TEU7 1601 aa10.35□□□□□ -0.75
NUP98-215ENST00000529063 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
NUP98-215ENST00000529063 FKBP8Q14318 412 aa10.33□□□□□ -0.76
NUP98-215ENST00000529063 BCORL1Q5H9F3 1711 aa10.31□□□□□ -0.76
NUP98-215ENST00000529063 ARID3CA6NKF2 412 aa10.31□□□□□ -0.76
NUP98-215ENST00000529063 NUP153P49790 1475 aaKnown RBP10.3□□□□□ -0.76
NUP98-215ENST00000529063 P3H3Q8IVL6 736 aa10.3□□□□□ -0.76
NUP98-215ENST00000529063 NEO1Q92859 1461 aa10.3□□□□□ -0.76
NUP98-215ENST00000529063 MADDQ8WXG6 1647 aa10.29□□□□□ -0.76
NUP98-215ENST00000529063 RICTORQ6R327 1708 aa10.29□□□□□ -0.76
NUP98-215ENST00000529063 PTPRMP28827 1452 aa10.29□□□□□ -0.76
NUP98-215ENST00000529063 ARHGEF40Q8TER5 1519 aa10.28□□□□□ -0.76
NUP98-215ENST00000529063 SIGLEC1Q9BZZ2 1709 aa10.28□□□□□ -0.76
NUP98-215ENST00000529063 PHLDB1Q86UU1 1377 aa10.26□□□□□ -0.77
NUP98-215ENST00000529063 FHOD3Q2V2M9 1422 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms