RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
AMBRA1-206ENST00000528950 UBE2Q2Q8WVN8 375 aa12.11□□□□□ -0.47
AMBRA1-206ENST00000528950 CLIP1P30622 1438 aa12.11□□□□□ -0.47
AMBRA1-206ENST00000528950 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
AMBRA1-206ENST00000528950 GOLGA3Q08378 1498 aa12.06□□□□□ -0.48
AMBRA1-206ENST00000528950 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
AMBRA1-206ENST00000528950 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
AMBRA1-206ENST00000528950 FAM50AQ14320 339 aaKnown RBP12.05□□□□□ -0.48
AMBRA1-206ENST00000528950 RUSC2Q8N2Y8 1516 aa12.05□□□□□ -0.48
AMBRA1-206ENST00000528950 GLIPR1L2Q4G1C9 344 aa12.04□□□□□ -0.48
AMBRA1-206ENST00000528950 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-206ENST00000528950 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
AMBRA1-206ENST00000528950 CCDC136Q96JN2 1154 aa12.01□□□□□ -0.49
AMBRA1-206ENST00000528950 SALL2Q9Y467 1007 aaPredicted RBP12□□□□□ -0.49
AMBRA1-206ENST00000528950 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
AMBRA1-206ENST00000528950 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
AMBRA1-206ENST00000528950 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
AMBRA1-206ENST00000528950 CFTRP13569 1480 aa11.99□□□□□ -0.49
AMBRA1-206ENST00000528950 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
AMBRA1-206ENST00000528950 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
AMBRA1-206ENST00000528950 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.49
AMBRA1-206ENST00000528950 NOP58Q9Y2X3 529 aaKnown RBP11.96□□□□□ -0.5
AMBRA1-206ENST00000528950 EEA1Q15075 1411 aa11.96□□□□□ -0.5
AMBRA1-206ENST00000528950 FAM9BQ8IZU0 186 aa11.95□□□□□ -0.5
AMBRA1-206ENST00000528950 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
AMBRA1-206ENST00000528950 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
AMBRA1-206ENST00000528950 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
AMBRA1-206ENST00000528950 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
AMBRA1-206ENST00000528950 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
AMBRA1-206ENST00000528950 CCER2I3L3R5 266 aa11.88□□□□□ -0.51
AMBRA1-206ENST00000528950 KIF21AQ7Z4S6 1674 aa11.87□□□□□ -0.51
AMBRA1-206ENST00000528950 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
AMBRA1-206ENST00000528950 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
AMBRA1-206ENST00000528950 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
AMBRA1-206ENST00000528950 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
AMBRA1-206ENST00000528950 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.51
AMBRA1-206ENST00000528950 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
AMBRA1-206ENST00000528950 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
AMBRA1-206ENST00000528950 P3H3Q8IVL6 736 aa11.83□□□□□ -0.52
AMBRA1-206ENST00000528950 IL27Q8NEV9 243 aa11.83□□□□□ -0.52
AMBRA1-206ENST00000528950 MRS2Q9HD23 443 aa11.82□□□□□ -0.52
AMBRA1-206ENST00000528950 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
AMBRA1-206ENST00000528950 ARXQ96QS3 562 aa11.79□□□□□ -0.52
AMBRA1-206ENST00000528950 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
AMBRA1-206ENST00000528950 NEFMP07197 916 aa11.79□□□□□ -0.52
AMBRA1-206ENST00000528950 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
AMBRA1-206ENST00000528950 CUX2O14529 1486 aa11.76□□□□□ -0.53
AMBRA1-206ENST00000528950 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
AMBRA1-206ENST00000528950 PLEKHG5O94827 1062 aa11.75□□□□□ -0.53
AMBRA1-206ENST00000528950 ERICH6BQ5W0A0 696 aa11.75□□□□□ -0.53
AMBRA1-206ENST00000528950 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-206ENST00000528950 FBLN2P98095 1184 aa11.74□□□□□ -0.53
AMBRA1-206ENST00000528950 IPO9Q96P70 1041 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-206ENST00000528950 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
AMBRA1-206ENST00000528950 WDR62O43379 1518 aa11.72□□□□□ -0.53
AMBRA1-206ENST00000528950 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
AMBRA1-206ENST00000528950 SETD5Q9C0A6 1442 aa11.71□□□□□ -0.53
AMBRA1-206ENST00000528950 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.54
AMBRA1-206ENST00000528950 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 KIF21BO75037 1637 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 CUX1P39880 1505 aa11.7□□□□□ -0.54
AMBRA1-206ENST00000528950 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-206ENST00000528950 ANP32BQ92688 251 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-206ENST00000528950 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-206ENST00000528950 CCDC184Q52MB2 194 aa11.65□□□□□ -0.54
AMBRA1-206ENST00000528950 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
AMBRA1-206ENST00000528950 EIF4G2P78344 907 aaKnown RBP eCLIP11.65□□□□□ -0.546e-7■■■□□ 18.8
AMBRA1-206ENST00000528950 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.545e-7■■■■■ 29
AMBRA1-206ENST00000528950 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.55
AMBRA1-206ENST00000528950 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-206ENST00000528950 CHIC2Q9UKJ5 165 aa11.63□□□□□ -0.55
AMBRA1-206ENST00000528950 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
AMBRA1-206ENST00000528950 TIMELESSQ9UNS1 1208 aa11.62□□□□□ -0.55
AMBRA1-206ENST00000528950 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
AMBRA1-206ENST00000528950 CANXP27824 592 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-206ENST00000528950 CHMP7Q8WUX9 453 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-206ENST00000528950 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-206ENST00000528950 PKNOX2Q96KN3 472 aa11.6□□□□□ -0.55
AMBRA1-206ENST00000528950 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-206ENST00000528950 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
AMBRA1-206ENST00000528950 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-206ENST00000528950 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-206ENST00000528950 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
AMBRA1-206ENST00000528950 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
AMBRA1-206ENST00000528950 TMC1Q8TDI8 760 aa11.58□□□□□ -0.56
AMBRA1-206ENST00000528950 HSP90AA1P07900 732 aaKnown RBP11.57□□□□□ -0.56
AMBRA1-206ENST00000528950 SLC4A3P48751 1232 aa11.57□□□□□ -0.56
AMBRA1-206ENST00000528950 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
AMBRA1-206ENST00000528950 TRIM44Q96DX7 344 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-206ENST00000528950 GAPVD1Q14C86 1478 aa11.55□□□□□ -0.56
AMBRA1-206ENST00000528950 PRKRIP1Q9H875 184 aaPredicted RBP11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 WASHC2AQ641Q2 1341 aa11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 MAPKBP1O60336 1514 aa11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 AKNAQ7Z591 1439 aa11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
AMBRA1-206ENST00000528950 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms