RNA–Protein interactions for RNA: ENST00000528780.5

IFITM1-204, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene IFITM1, Length 730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-204ENST00000528780 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
IFITM1-204ENST00000528780 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
IFITM1-204ENST00000528780 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
IFITM1-204ENST00000528780 OSCARQ8IYS5 282 aa24.03■■□□□ 1.44
IFITM1-204ENST00000528780 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
IFITM1-204ENST00000528780 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
IFITM1-204ENST00000528780 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
IFITM1-204ENST00000528780 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
IFITM1-204ENST00000528780 EHMT2Q96KQ7 1210 aa23.93■■□□□ 1.42
IFITM1-204ENST00000528780 SAMD9Q5K651 1589 aa23.92■■□□□ 1.42
IFITM1-204ENST00000528780 EFCAB5A4FU69 1503 aa23.9■■□□□ 1.42
IFITM1-204ENST00000528780 KIAA0556O60303 1618 aa23.87■■□□□ 1.41
IFITM1-204ENST00000528780 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
IFITM1-204ENST00000528780 DISP1Q96F81 1524 aa23.83■■□□□ 1.41
IFITM1-204ENST00000528780 CEP162Q5TB80 1403 aa23.82■■□□□ 1.4
IFITM1-204ENST00000528780 CARMIL2Q6F5E8 1435 aa23.8■■□□□ 1.4
IFITM1-204ENST00000528780 PRG4Q92954 1404 aaPredicted RBP23.8■■□□□ 1.4
IFITM1-204ENST00000528780 CLIP1P30622 1438 aa23.78■■□□□ 1.4
IFITM1-204ENST00000528780 ARHGAP35Q9NRY4 1499 aa23.78■■□□□ 1.4
IFITM1-204ENST00000528780 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
IFITM1-204ENST00000528780 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
IFITM1-204ENST00000528780 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
IFITM1-204ENST00000528780 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
IFITM1-204ENST00000528780 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
IFITM1-204ENST00000528780 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
IFITM1-204ENST00000528780 FHOD3Q2V2M9 1422 aa23.66■■□□□ 1.38
IFITM1-204ENST00000528780 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
IFITM1-204ENST00000528780 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
IFITM1-204ENST00000528780 PTPRGP23470 1445 aa23.58■■□□□ 1.36
IFITM1-204ENST00000528780 P3H3Q8IVL6 736 aa23.57■■□□□ 1.36
IFITM1-204ENST00000528780 RAPGEF6Q8TEU7 1601 aa23.56■■□□□ 1.36
IFITM1-204ENST00000528780 ABCA8O94911 1581 aa23.56■■□□□ 1.36
IFITM1-204ENST00000528780 PCF11O94913 1555 aaKnown RBP23.52■■□□□ 1.36
IFITM1-204ENST00000528780 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
IFITM1-204ENST00000528780 HECW1Q76N89 1606 aa23.51■■□□□ 1.35
IFITM1-204ENST00000528780 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
IFITM1-204ENST00000528780 UHRF1BP1LA0JNW5 1464 aa23.49■■□□□ 1.35
IFITM1-204ENST00000528780 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
IFITM1-204ENST00000528780 UACAQ9BZF9 1416 aa23.48■■□□□ 1.35
IFITM1-204ENST00000528780 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
IFITM1-204ENST00000528780 PLB1Q6P1J6 1458 aa23.47■■□□□ 1.35
IFITM1-204ENST00000528780 ADCY10Q96PN6 1610 aa23.47■■□□□ 1.35
IFITM1-204ENST00000528780 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
IFITM1-204ENST00000528780 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
IFITM1-204ENST00000528780 TTBK1Q5TCY1 1321 aaPredicted RBP23.39■■□□□ 1.34
IFITM1-204ENST00000528780 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
IFITM1-204ENST00000528780 ZCCHC11Q5TAX3 1644 aaKnown RBP23.37■■□□□ 1.33
IFITM1-204ENST00000528780 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
IFITM1-204ENST00000528780 KDM5BQ9UGL1 1544 aa23.36■■□□□ 1.33
IFITM1-204ENST00000528780 EPRSP07814 1512 aaKnown RBP23.34■■□□□ 1.33
IFITM1-204ENST00000528780 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
IFITM1-204ENST00000528780 MAP3K1Q13233 1512 aa23.33■■□□□ 1.32
IFITM1-204ENST00000528780 TIAM1Q13009 1591 aa23.3■■□□□ 1.32
IFITM1-204ENST00000528780 ATP10BO94823 1461 aa23.28■■□□□ 1.32
IFITM1-204ENST00000528780 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
IFITM1-204ENST00000528780 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
IFITM1-204ENST00000528780 ATP1B4Q9UN42 357 aaPredicted RBP23.21■■□□□ 1.31
IFITM1-204ENST00000528780 NPM1P06748 294 aaKnown RBP eCLIP23.18■■□□□ 1.3
IFITM1-204ENST00000528780 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
IFITM1-204ENST00000528780 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
IFITM1-204ENST00000528780 APLP2Q06481 763 aa23.15■■□□□ 1.3
IFITM1-204ENST00000528780 CDK11AQ9UQ88 783 aaPredicted RBP23.14■■□□□ 1.29
IFITM1-204ENST00000528780 LRRC9Q6ZRR7 1453 aa23.13■■□□□ 1.29
IFITM1-204ENST00000528780 WDR7Q9Y4E6 1490 aa23.13■■□□□ 1.29
IFITM1-204ENST00000528780 TROQ12816 1431 aaPredicted RBP23.12■■□□□ 1.29
IFITM1-204ENST00000528780 ASXL2Q76L83 1435 aa23.12■■□□□ 1.29
IFITM1-204ENST00000528780 SUPT6HQ7KZ85 1726 aaKnown RBP23.12■■□□□ 1.29
IFITM1-204ENST00000528780 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
IFITM1-204ENST00000528780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
IFITM1-204ENST00000528780 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
IFITM1-204ENST00000528780 KIF14Q15058 1648 aa23.1■■□□□ 1.29
IFITM1-204ENST00000528780 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
IFITM1-204ENST00000528780 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
IFITM1-204ENST00000528780 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
IFITM1-204ENST00000528780 DIP2BQ9P265 1576 aa23.04■■□□□ 1.28
IFITM1-204ENST00000528780 GLI2P10070 1586 aa23.03■■□□□ 1.28
IFITM1-204ENST00000528780 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
IFITM1-204ENST00000528780 MYO5CQ9NQX4 1742 aa23■■□□□ 1.27
IFITM1-204ENST00000528780 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
IFITM1-204ENST00000528780 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
IFITM1-204ENST00000528780 CDC42BPAQ5VT25 1732 aa22.99■■□□□ 1.27
IFITM1-204ENST00000528780 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
IFITM1-204ENST00000528780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.98■■□□□ 1.27
IFITM1-204ENST00000528780 TTC37Q6PGP7 1564 aa22.98■■□□□ 1.27
IFITM1-204ENST00000528780 NCOA2Q15596 1464 aa22.96■■□□□ 1.27
IFITM1-204ENST00000528780 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
IFITM1-204ENST00000528780 PREX2Q70Z35 1606 aa22.94■■□□□ 1.26
IFITM1-204ENST00000528780 CDC42BPBQ9Y5S2 1711 aa22.93■■□□□ 1.26
IFITM1-204ENST00000528780 ARAP3Q8WWN8 1544 aa22.91■■□□□ 1.26
IFITM1-204ENST00000528780 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
IFITM1-204ENST00000528780 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
IFITM1-204ENST00000528780 TSPOAP1O95153 1857 aa22.85■■□□□ 1.25
IFITM1-204ENST00000528780 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
IFITM1-204ENST00000528780 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
IFITM1-204ENST00000528780 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
IFITM1-204ENST00000528780 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
IFITM1-204ENST00000528780 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
IFITM1-204ENST00000528780 PLCH2O75038 1416 aa22.82■■□□□ 1.24
IFITM1-204ENST00000528780 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
IFITM1-204ENST00000528780 FAM69CQ0P6D2 419 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms