RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
CHRDL2-205ENST00000528471 JPH4Q96JJ6 628 aa23.88■■□□□ 1.41
CHRDL2-205ENST00000528471 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
CHRDL2-205ENST00000528471 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
CHRDL2-205ENST00000528471 IQGAP2Q13576 1575 aa23.74■■□□□ 1.39
CHRDL2-205ENST00000528471 RAPGEF2Q9Y4G8 1499 aa23.71■■□□□ 1.39
CHRDL2-205ENST00000528471 ADCY10Q96PN6 1610 aa23.67■■□□□ 1.38
CHRDL2-205ENST00000528471 CARMIL2Q6F5E8 1435 aa23.65■■□□□ 1.38
CHRDL2-205ENST00000528471 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
CHRDL2-205ENST00000528471 CTTNBP2Q8WZ74 1663 aa23.64■■□□□ 1.37
CHRDL2-205ENST00000528471 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHRDL2-205ENST00000528471 PTPRGP23470 1445 aa23.58■■□□□ 1.37
CHRDL2-205ENST00000528471 MAPKBP1O60336 1514 aa23.57■■□□□ 1.36
CHRDL2-205ENST00000528471 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
CHRDL2-205ENST00000528471 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
CHRDL2-205ENST00000528471 UGGT2Q9NYU1 1516 aa23.55■■□□□ 1.36
CHRDL2-205ENST00000528471 DISP1Q96F81 1524 aa23.53■■□□□ 1.36
CHRDL2-205ENST00000528471 KIAA0556O60303 1618 aa23.51■■□□□ 1.35
CHRDL2-205ENST00000528471 PRXQ9BXM0 1461 aa23.5■■□□□ 1.35
CHRDL2-205ENST00000528471 DIP2BQ9P265 1576 aa23.49■■□□□ 1.35
CHRDL2-205ENST00000528471 ABCC10Q5T3U5 1492 aa23.48■■□□□ 1.35
CHRDL2-205ENST00000528471 ABCC2Q92887 1545 aa23.45■■□□□ 1.34
CHRDL2-205ENST00000528471 FAM69CQ0P6D2 419 aa23.43■■□□□ 1.34
CHRDL2-205ENST00000528471 UACAQ9BZF9 1416 aa23.42■■□□□ 1.34
CHRDL2-205ENST00000528471 UHRF1BP1LA0JNW5 1464 aa23.41■■□□□ 1.34
CHRDL2-205ENST00000528471 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
CHRDL2-205ENST00000528471 TSPOAP1O95153 1857 aa23.4■■□□□ 1.34
CHRDL2-205ENST00000528471 EEA1Q15075 1411 aa23.38■■□□□ 1.33
CHRDL2-205ENST00000528471 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
CHRDL2-205ENST00000528471 ZCCHC11Q5TAX3 1644 aaKnown RBP23.34■■□□□ 1.33
CHRDL2-205ENST00000528471 ASXL2Q76L83 1435 aa23.32■■□□□ 1.32
CHRDL2-205ENST00000528471 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
CHRDL2-205ENST00000528471 KDM5BQ9UGL1 1544 aa23.31■■□□□ 1.32
CHRDL2-205ENST00000528471 GLI2P10070 1586 aa23.26■■□□□ 1.31
CHRDL2-205ENST00000528471 ABCA8O94911 1581 aa23.25■■□□□ 1.31
CHRDL2-205ENST00000528471 KDM6BO15054 1643 aa23.25■■□□□ 1.31
CHRDL2-205ENST00000528471 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
CHRDL2-205ENST00000528471 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
CHRDL2-205ENST00000528471 KIF21BO75037 1637 aa23.22■■□□□ 1.31
CHRDL2-205ENST00000528471 PPRC1Q5VV67 1664 aaKnown RBP23.2■■□□□ 1.3
CHRDL2-205ENST00000528471 EPRSP07814 1512 aaKnown RBP23.19■■□□□ 1.3
CHRDL2-205ENST00000528471 MAP3K4Q9Y6R4 1608 aa23.18■■□□□ 1.3
CHRDL2-205ENST00000528471 WDR7Q9Y4E6 1490 aa23.17■■□□□ 1.3
CHRDL2-205ENST00000528471 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
CHRDL2-205ENST00000528471 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.3
CHRDL2-205ENST00000528471 RAPGEF6Q8TEU7 1601 aa23.1■■□□□ 1.29
CHRDL2-205ENST00000528471 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
CHRDL2-205ENST00000528471 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
CHRDL2-205ENST00000528471 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
CHRDL2-205ENST00000528471 CFAP43Q8NDM7 1665 aa23.07■■□□□ 1.28
CHRDL2-205ENST00000528471 EFCAB5A4FU69 1503 aa23.06■■□□□ 1.28
CHRDL2-205ENST00000528471 FHOD3Q2V2M9 1422 aa23.03■■□□□ 1.28
CHRDL2-205ENST00000528471 ARID3CA6NKF2 412 aa23.03■■□□□ 1.28
CHRDL2-205ENST00000528471 KCNH8Q96L42 1107 aa23.01■■□□□ 1.27
CHRDL2-205ENST00000528471 ATP10BO94823 1461 aa23.01■■□□□ 1.27
CHRDL2-205ENST00000528471 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
CHRDL2-205ENST00000528471 CD109Q6YHK3 1445 aa22.97■■□□□ 1.27
CHRDL2-205ENST00000528471 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
CHRDL2-205ENST00000528471 NUP153P49790 1475 aaKnown RBP22.95■■□□□ 1.26
CHRDL2-205ENST00000528471 MAGI3Q5TCQ9 1506 aa22.94■■□□□ 1.26
CHRDL2-205ENST00000528471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
CHRDL2-205ENST00000528471 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
CHRDL2-205ENST00000528471 ABCA9Q8IUA7 1624 aa22.91■■□□□ 1.26
CHRDL2-205ENST00000528471 COL17A1Q9UMD9 1497 aaPredicted RBP22.91■■□□□ 1.26
CHRDL2-205ENST00000528471 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
CHRDL2-205ENST00000528471 HECW1Q76N89 1606 aa22.82■■□□□ 1.24
CHRDL2-205ENST00000528471 FMN1Q68DA7 1419 aa22.82■■□□□ 1.24
CHRDL2-205ENST00000528471 CDK13Q14004 1512 aaKnown RBP22.78■■□□□ 1.24
CHRDL2-205ENST00000528471 PLEKHD1A6NEE1 506 aa22.78■■□□□ 1.24
CHRDL2-205ENST00000528471 ARAP3Q8WWN8 1544 aa22.76■■□□□ 1.23
CHRDL2-205ENST00000528471 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
CHRDL2-205ENST00000528471 ADGRL1O94910 1474 aa22.73■■□□□ 1.23
CHRDL2-205ENST00000528471 NEO1Q92859 1461 aa22.73■■□□□ 1.23
CHRDL2-205ENST00000528471 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
CHRDL2-205ENST00000528471 PHLDB1Q86UU1 1377 aa22.73■■□□□ 1.23
CHRDL2-205ENST00000528471 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
CHRDL2-205ENST00000528471 TTC37Q6PGP7 1564 aa22.71■■□□□ 1.23
CHRDL2-205ENST00000528471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
CHRDL2-205ENST00000528471 LRRIQ1Q96JM4 1722 aa22.69■■□□□ 1.22
CHRDL2-205ENST00000528471 PCF11O94913 1555 aaKnown RBP22.64■■□□□ 1.22
CHRDL2-205ENST00000528471 MYO5CQ9NQX4 1742 aa22.64■■□□□ 1.21
CHRDL2-205ENST00000528471 FANCAO15360 1455 aa22.63■■□□□ 1.21
CHRDL2-205ENST00000528471 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
CHRDL2-205ENST00000528471 KIF14Q15058 1648 aa22.63■■□□□ 1.21
CHRDL2-205ENST00000528471 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
CHRDL2-205ENST00000528471 RICTORQ6R327 1708 aa22.61■■□□□ 1.21
CHRDL2-205ENST00000528471 RAPGEF3O95398 923 aa22.59■■□□□ 1.21
CHRDL2-205ENST00000528471 AKNAQ7Z591 1439 aa22.58■■□□□ 1.21
CHRDL2-205ENST00000528471 CLIP1P30622 1438 aa22.57■■□□□ 1.2
CHRDL2-205ENST00000528471 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
CHRDL2-205ENST00000528471 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
CHRDL2-205ENST00000528471 DENND4BO75064 1496 aaPredicted RBP22.57■■□□□ 1.2
CHRDL2-205ENST00000528471 TROQ12816 1431 aaPredicted RBP22.56■■□□□ 1.2
CHRDL2-205ENST00000528471 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
CHRDL2-205ENST00000528471 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
CHRDL2-205ENST00000528471 PLCH2O75038 1416 aa22.52■■□□□ 1.2
CHRDL2-205ENST00000528471 ZMYM4Q5VZL5 1548 aa22.49■■□□□ 1.19
CHRDL2-205ENST00000528471 ARHGAP5Q13017 1502 aa22.48■■□□□ 1.19
CHRDL2-205ENST00000528471 ZFYVE16Q7Z3T8 1539 aa22.45■■□□□ 1.19
CHRDL2-205ENST00000528471 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms