RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
CMTM1-210ENST00000528441 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
CMTM1-210ENST00000528441 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
CMTM1-210ENST00000528441 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
CMTM1-210ENST00000528441 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
CMTM1-210ENST00000528441 CUL7Q14999 1698 aa15.42■□□□□ 0.06
CMTM1-210ENST00000528441 NUP160Q12769 1436 aa15.42■□□□□ 0.06
CMTM1-210ENST00000528441 IGF1RP08069 1367 aa15.36■□□□□ 0.05
CMTM1-210ENST00000528441 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
CMTM1-210ENST00000528441 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
CMTM1-210ENST00000528441 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
CMTM1-210ENST00000528441 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-210ENST00000528441 JPH4Q96JJ6 628 aa15.33■□□□□ 0.04
CMTM1-210ENST00000528441 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-210ENST00000528441 SHROOM2Q13796 1616 aa15.31■□□□□ 0.04
CMTM1-210ENST00000528441 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
CMTM1-210ENST00000528441 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
CMTM1-210ENST00000528441 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
CMTM1-210ENST00000528441 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
CMTM1-210ENST00000528441 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
CMTM1-210ENST00000528441 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
CMTM1-210ENST00000528441 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
CMTM1-210ENST00000528441 PTPRGP23470 1445 aa15.14■□□□□ 0.01
CMTM1-210ENST00000528441 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
CMTM1-210ENST00000528441 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
CMTM1-210ENST00000528441 ADCY10Q96PN6 1610 aa15.09■□□□□ 0.01
CMTM1-210ENST00000528441 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
CMTM1-210ENST00000528441 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
CMTM1-210ENST00000528441 EEA1Q15075 1411 aa15.08■□□□□ 0
CMTM1-210ENST00000528441 PRXQ9BXM0 1461 aa15.06■□□□□ 0
CMTM1-210ENST00000528441 KIAA0556O60303 1618 aa15.06■□□□□ 0
CMTM1-210ENST00000528441 GOLGA3Q08378 1498 aa15.05■□□□□ -0
CMTM1-210ENST00000528441 UGGT2Q9NYU1 1516 aa15.05■□□□□ -0
CMTM1-210ENST00000528441 FAM69CQ0P6D2 419 aa15.04■□□□□ -0
CMTM1-210ENST00000528441 DISP1Q96F81 1524 aa15.03■□□□□ -0
CMTM1-210ENST00000528441 UACAQ9BZF9 1416 aa15.01□□□□□ -0.01
CMTM1-210ENST00000528441 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
CMTM1-210ENST00000528441 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
CMTM1-210ENST00000528441 MAPKBP1O60336 1514 aa15□□□□□ -0.01
CMTM1-210ENST00000528441 SCAF1Q9H7N4 1312 aaKnown RBP14.99□□□□□ -0.01
CMTM1-210ENST00000528441 ABCC2Q92887 1545 aa14.98□□□□□ -0.01
CMTM1-210ENST00000528441 TSPOAP1O95153 1857 aa14.97□□□□□ -0.01
CMTM1-210ENST00000528441 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
CMTM1-210ENST00000528441 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
CMTM1-210ENST00000528441 DIP2BQ9P265 1576 aa14.96□□□□□ -0.01
CMTM1-210ENST00000528441 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
CMTM1-210ENST00000528441 ARID3CA6NKF2 412 aa14.94□□□□□ -0.02
CMTM1-210ENST00000528441 UHRF1BP1LA0JNW5 1464 aa14.94□□□□□ -0.02
CMTM1-210ENST00000528441 ASXL2Q76L83 1435 aa14.93□□□□□ -0.02
CMTM1-210ENST00000528441 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
CMTM1-210ENST00000528441 KIF21BO75037 1637 aa14.92□□□□□ -0.02
CMTM1-210ENST00000528441 ZCCHC11Q5TAX3 1644 aaKnown RBP14.92□□□□□ -0.02
CMTM1-210ENST00000528441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
CMTM1-210ENST00000528441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
CMTM1-210ENST00000528441 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
CMTM1-210ENST00000528441 KDM5BQ9UGL1 1544 aa14.87□□□□□ -0.03
CMTM1-210ENST00000528441 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
CMTM1-210ENST00000528441 ABCA8O94911 1581 aa14.85□□□□□ -0.03
CMTM1-210ENST00000528441 SAMD9Q5K651 1589 aa14.85□□□□□ -0.03
CMTM1-210ENST00000528441 KDM6BO15054 1643 aa14.85□□□□□ -0.03
CMTM1-210ENST00000528441 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
CMTM1-210ENST00000528441 ATP1B4Q9UN42 357 aaPredicted RBP14.84□□□□□ -0.03
CMTM1-210ENST00000528441 WDR7Q9Y4E6 1490 aa14.82□□□□□ -0.04
CMTM1-210ENST00000528441 RAPGEF6Q8TEU7 1601 aa14.82□□□□□ -0.04
CMTM1-210ENST00000528441 EPRSP07814 1512 aaKnown RBP14.82□□□□□ -0.04
CMTM1-210ENST00000528441 EFCAB5A4FU69 1503 aa14.81□□□□□ -0.04
CMTM1-210ENST00000528441 GLI2P10070 1586 aa14.8□□□□□ -0.04
CMTM1-210ENST00000528441 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
CMTM1-210ENST00000528441 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
CMTM1-210ENST00000528441 MAP3K4Q9Y6R4 1608 aa14.75□□□□□ -0.05
CMTM1-210ENST00000528441 ATP10BO94823 1461 aa14.74□□□□□ -0.05
CMTM1-210ENST00000528441 CD109Q6YHK3 1445 aa14.74□□□□□ -0.05
CMTM1-210ENST00000528441 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
CMTM1-210ENST00000528441 PPRC1Q5VV67 1664 aaKnown RBP14.72□□□□□ -0.05
CMTM1-210ENST00000528441 PLEKHD1A6NEE1 506 aa14.71□□□□□ -0.05
CMTM1-210ENST00000528441 FMN1Q68DA7 1419 aa14.7□□□□□ -0.06
CMTM1-210ENST00000528441 NUP153P49790 1475 aaKnown RBP14.69□□□□□ -0.06
CMTM1-210ENST00000528441 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
CMTM1-210ENST00000528441 ARHGAP35Q9NRY4 1499 aa14.67□□□□□ -0.06
CMTM1-210ENST00000528441 CDK13Q14004 1512 aaKnown RBP14.65□□□□□ -0.06
CMTM1-210ENST00000528441 MAGI3Q5TCQ9 1506 aa14.64□□□□□ -0.07
CMTM1-210ENST00000528441 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
CMTM1-210ENST00000528441 ABCA9Q8IUA7 1624 aa14.62□□□□□ -0.07
CMTM1-210ENST00000528441 CLIP1P30622 1438 aa14.6□□□□□ -0.07
CMTM1-210ENST00000528441 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
CMTM1-210ENST00000528441 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
CMTM1-210ENST00000528441 PCF11O94913 1555 aaKnown RBP14.57□□□□□ -0.08
CMTM1-210ENST00000528441 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
CMTM1-210ENST00000528441 KIF14Q15058 1648 aa14.55□□□□□ -0.08
CMTM1-210ENST00000528441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.54□□□□□ -0.08
CMTM1-210ENST00000528441 TTC37Q6PGP7 1564 aa14.54□□□□□ -0.08
CMTM1-210ENST00000528441 CCDC18Q5T9S5 1454 aa14.53□□□□□ -0.08
CMTM1-210ENST00000528441 NEO1Q92859 1461 aa14.53□□□□□ -0.08
CMTM1-210ENST00000528441 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
CMTM1-210ENST00000528441 FANCAO15360 1455 aa14.52□□□□□ -0.08
CMTM1-210ENST00000528441 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
CMTM1-210ENST00000528441 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
CMTM1-210ENST00000528441 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
CMTM1-210ENST00000528441 MYO5CQ9NQX4 1742 aa14.51□□□□□ -0.09
CMTM1-210ENST00000528441 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms