RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
SOX6-211ENST00000528429 CUL7Q14999 1698 aa11.92□□□□□ -0.5
SOX6-211ENST00000528429 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
SOX6-211ENST00000528429 ARAP1Q96P48 1450 aa11.9□□□□□ -0.5
SOX6-211ENST00000528429 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
SOX6-211ENST00000528429 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
SOX6-211ENST00000528429 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
SOX6-211ENST00000528429 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
SOX6-211ENST00000528429 FBLN2P98095 1184 aa11.83□□□□□ -0.51
SOX6-211ENST00000528429 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
SOX6-211ENST00000528429 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
SOX6-211ENST00000528429 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
SOX6-211ENST00000528429 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
SOX6-211ENST00000528429 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
SOX6-211ENST00000528429 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
SOX6-211ENST00000528429 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
SOX6-211ENST00000528429 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.52
SOX6-211ENST00000528429 EFCAB5A4FU69 1503 aa11.75□□□□□ -0.53
SOX6-211ENST00000528429 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
SOX6-211ENST00000528429 HRCP23327 699 aa11.74□□□□□ -0.53
SOX6-211ENST00000528429 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
SOX6-211ENST00000528429 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
SOX6-211ENST00000528429 SYNJ2O15056 1496 aa11.73□□□□□ -0.53
SOX6-211ENST00000528429 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
SOX6-211ENST00000528429 PCF11O94913 1555 aaKnown RBP11.71□□□□□ -0.54
SOX6-211ENST00000528429 FMN1Q68DA7 1419 aa11.71□□□□□ -0.54
SOX6-211ENST00000528429 HNRNPUL2Q1KMD3 747 aaKnown RBP11.69□□□□□ -0.54
SOX6-211ENST00000528429 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
SOX6-211ENST00000528429 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
SOX6-211ENST00000528429 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
SOX6-211ENST00000528429 FYCO1Q9BQS8 1478 aa11.66□□□□□ -0.54
SOX6-211ENST00000528429 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
SOX6-211ENST00000528429 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
SOX6-211ENST00000528429 CEP170Q5SW79 1584 aa11.65□□□□□ -0.54
SOX6-211ENST00000528429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
SOX6-211ENST00000528429 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
SOX6-211ENST00000528429 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
SOX6-211ENST00000528429 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
SOX6-211ENST00000528429 NUP160Q12769 1436 aa11.63□□□□□ -0.55
SOX6-211ENST00000528429 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
SOX6-211ENST00000528429 MAP3K1Q13233 1512 aa11.62□□□□□ -0.55
SOX6-211ENST00000528429 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
SOX6-211ENST00000528429 MTUS2Q5JR59 1369 aa11.61□□□□□ -0.55
SOX6-211ENST00000528429 ITGAEP38570 1179 aa11.61□□□□□ -0.55
SOX6-211ENST00000528429 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
SOX6-211ENST00000528429 KIAA0556O60303 1618 aa11.59□□□□□ -0.55
SOX6-211ENST00000528429 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.55
SOX6-211ENST00000528429 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
SOX6-211ENST00000528429 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
SOX6-211ENST00000528429 CARMIL2Q6F5E8 1435 aa11.57□□□□□ -0.56
SOX6-211ENST00000528429 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
SOX6-211ENST00000528429 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
SOX6-211ENST00000528429 RRBP1Q9P2E9 1410 aaKnown RBP11.55□□□□□ -0.56
SOX6-211ENST00000528429 CHD1O14646 1710 aa11.55□□□□□ -0.56
SOX6-211ENST00000528429 HECW1Q76N89 1606 aa11.54□□□□□ -0.56
SOX6-211ENST00000528429 CDK13Q14004 1512 aaKnown RBP11.54□□□□□ -0.56
SOX6-211ENST00000528429 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
SOX6-211ENST00000528429 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
SOX6-211ENST00000528429 ZEB1P37275 1124 aaPredicted RBP11.53□□□□□ -0.56
SOX6-211ENST00000528429 CCDC18Q5T9S5 1454 aa11.53□□□□□ -0.56
SOX6-211ENST00000528429 LRRIQ1Q96JM4 1722 aa11.52□□□□□ -0.56
SOX6-211ENST00000528429 PLB1Q6P1J6 1458 aa11.52□□□□□ -0.57
SOX6-211ENST00000528429 NUP153P49790 1475 aaKnown RBP11.5□□□□□ -0.57
SOX6-211ENST00000528429 MAGI3Q5TCQ9 1506 aa11.49□□□□□ -0.57
SOX6-211ENST00000528429 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
SOX6-211ENST00000528429 RAPGEF6Q8TEU7 1601 aa11.48□□□□□ -0.57
SOX6-211ENST00000528429 EHBP1L1Q8N3D4 1523 aa11.48□□□□□ -0.57
SOX6-211ENST00000528429 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
SOX6-211ENST00000528429 PTPRGP23470 1445 aa11.48□□□□□ -0.57
SOX6-211ENST00000528429 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
SOX6-211ENST00000528429 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
SOX6-211ENST00000528429 MYOM3Q5VTT5 1437 aa11.45□□□□□ -0.58
SOX6-211ENST00000528429 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
SOX6-211ENST00000528429 ERCC6L2Q5T890 1561 aa11.43□□□□□ -0.58
SOX6-211ENST00000528429 PLEKHD1A6NEE1 506 aa11.41□□□□□ -0.58
SOX6-211ENST00000528429 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
SOX6-211ENST00000528429 ABCA8O94911 1581 aa11.4□□□□□ -0.58
SOX6-211ENST00000528429 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
SOX6-211ENST00000528429 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
SOX6-211ENST00000528429 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
SOX6-211ENST00000528429 ATP10BO94823 1461 aa11.39□□□□□ -0.59
SOX6-211ENST00000528429 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
SOX6-211ENST00000528429 RAB3GAP2Q9H2M9 1393 aa11.38□□□□□ -0.59
SOX6-211ENST00000528429 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
SOX6-211ENST00000528429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
SOX6-211ENST00000528429 OSCARQ8IYS5 282 aa11.37□□□□□ -0.59
SOX6-211ENST00000528429 CHIC2Q9UKJ5 165 aa11.37□□□□□ -0.59
SOX6-211ENST00000528429 SETD5Q9C0A6 1442 aa11.37□□□□□ -0.59
SOX6-211ENST00000528429 ZNF777Q9ULD5 760 aaPredicted RBP11.36□□□□□ -0.59
SOX6-211ENST00000528429 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
SOX6-211ENST00000528429 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
SOX6-211ENST00000528429 ZNF644Q9H582 1327 aaPredicted RBP11.36□□□□□ -0.59
SOX6-211ENST00000528429 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
SOX6-211ENST00000528429 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
SOX6-211ENST00000528429 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
SOX6-211ENST00000528429 MIA2Q96PC5 1412 aa11.34□□□□□ -0.59
SOX6-211ENST00000528429 KIF14Q15058 1648 aa11.33□□□□□ -0.6
SOX6-211ENST00000528429 RRP7BPQ9NSQ0 103 aa11.33□□□□□ -0.6
SOX6-211ENST00000528429 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
SOX6-211ENST00000528429 TCOF1Q13428 1488 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms