RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 GRIN2BQ13224 1484 aa6.48□□□□□ -1.37
PTPN22-207ENST00000528414 CEP170Q5SW79 1584 aa6.47□□□□□ -1.37
PTPN22-207ENST00000528414 ADAMTSL3P82987 1691 aa6.47□□□□□ -1.37
PTPN22-207ENST00000528414 ZNF608Q9ULD9 1512 aaPredicted RBP6.46□□□□□ -1.38
PTPN22-207ENST00000528414 POLA1P09884 1462 aaPredicted RBP6.46□□□□□ -1.38
PTPN22-207ENST00000528414 ABCC10Q5T3U5 1492 aa6.46□□□□□ -1.38
PTPN22-207ENST00000528414 ARXQ96QS3 562 aa6.45□□□□□ -1.38
PTPN22-207ENST00000528414 ADCY10Q96PN6 1610 aa6.43□□□□□ -1.38
PTPN22-207ENST00000528414 TIMELESSQ9UNS1 1208 aa6.43□□□□□ -1.38
PTPN22-207ENST00000528414 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
PTPN22-207ENST00000528414 CFAP74Q9C0B2 1584 aa6.41□□□□□ -1.38
PTPN22-207ENST00000528414 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.39
PTPN22-207ENST00000528414 BCORL1Q5H9F3 1711 aa6.4□□□□□ -1.39
PTPN22-207ENST00000528414 OSCARQ8IYS5 282 aa6.38□□□□□ -1.39
PTPN22-207ENST00000528414 GRIN2AQ12879 1464 aa6.38□□□□□ -1.39
PTPN22-207ENST00000528414 CUX1P39880 1505 aa6.38□□□□□ -1.39
PTPN22-207ENST00000528414 ARAP3Q8WWN8 1544 aa6.38□□□□□ -1.39
PTPN22-207ENST00000528414 MAGI3Q5TCQ9 1506 aa6.38□□□□□ -1.39
PTPN22-207ENST00000528414 MROH2AA6NES4 1674 aa6.37□□□□□ -1.39
PTPN22-207ENST00000528414 FER1L4A9Z1Z3 1794 aa6.37□□□□□ -1.39
PTPN22-207ENST00000528414 AMER1Q5JTC6 1135 aaPredicted RBP6.35□□□□□ -1.39
PTPN22-207ENST00000528414 CCDC88BA6NC98 1476 aa6.35□□□□□ -1.39
PTPN22-207ENST00000528414 EIF5BO60841 1220 aaKnown RBP6.35□□□□□ -1.39
PTPN22-207ENST00000528414 UGGT2Q9NYU1 1516 aa6.35□□□□□ -1.39
PTPN22-207ENST00000528414 ZNF142P52746 1687 aaPredicted RBP6.34□□□□□ -1.39
PTPN22-207ENST00000528414 EPRSP07814 1512 aaKnown RBP6.34□□□□□ -1.39
PTPN22-207ENST00000528414 PHLDB1Q86UU1 1377 aa6.34□□□□□ -1.39
PTPN22-207ENST00000528414 CHIC1Q5VXU3 224 aa6.34□□□□□ -1.4
PTPN22-207ENST00000528414 ABCA9Q8IUA7 1624 aa6.34□□□□□ -1.4
PTPN22-207ENST00000528414 SNAPC4Q5SXM2 1469 aa6.33□□□□□ -1.4
PTPN22-207ENST00000528414 KLHL34Q8N239 644 aa6.33□□□□□ -1.4
PTPN22-207ENST00000528414 GAPVD1Q14C86 1478 aa6.33□□□□□ -1.4
PTPN22-207ENST00000528414 CTTNBP2Q8WZ74 1663 aa6.33□□□□□ -1.4
PTPN22-207ENST00000528414 KCNA4P22459 653 aa6.32□□□□□ -1.4
PTPN22-207ENST00000528414 TTC37Q6PGP7 1564 aa6.32□□□□□ -1.4
PTPN22-207ENST00000528414 FHAD1B1AJZ9 1412 aa6.32□□□□□ -1.4
PTPN22-207ENST00000528414 LMTK3Q96Q04 1460 aa6.31□□□□□ -1.4
PTPN22-207ENST00000528414 PLEKHG5O94827 1062 aa6.28□□□□□ -1.4
PTPN22-207ENST00000528414 FGD5Q6ZNL6 1462 aa6.28□□□□□ -1.4
PTPN22-207ENST00000528414 TEX14Q8IWB6 1497 aa6.27□□□□□ -1.4
PTPN22-207ENST00000528414 PREX1Q8TCU6 1659 aa6.27□□□□□ -1.41
PTPN22-207ENST00000528414 RICTORQ6R327 1708 aa6.27□□□□□ -1.41
PTPN22-207ENST00000528414 ABCC2Q92887 1545 aa6.27□□□□□ -1.41
PTPN22-207ENST00000528414 ABCA8O94911 1581 aa6.27□□□□□ -1.41
PTPN22-207ENST00000528414 FRMPD1Q5SYB0 1578 aa6.27□□□□□ -1.41
PTPN22-207ENST00000528414 PLB1Q6P1J6 1458 aa6.26□□□□□ -1.41
PTPN22-207ENST00000528414 ZCCHC11Q5TAX3 1644 aaKnown RBP6.26□□□□□ -1.41
PTPN22-207ENST00000528414 ARHGEF40Q8TER5 1519 aa6.26□□□□□ -1.41
PTPN22-207ENST00000528414 PCF11O94913 1555 aaKnown RBP6.25□□□□□ -1.41
PTPN22-207ENST00000528414 TULP1O00294 542 aaPredicted RBP6.25□□□□□ -1.41
PTPN22-207ENST00000528414 KDM5AP29375 1690 aaKnown RBP6.25□□□□□ -1.41
PTPN22-207ENST00000528414 HECW2Q9P2P5 1572 aa6.24□□□□□ -1.41
PTPN22-207ENST00000528414 SAMD9Q5K651 1589 aa6.24□□□□□ -1.41
PTPN22-207ENST00000528414 BCL11AQ9H165 835 aa6.24□□□□□ -1.41
PTPN22-207ENST00000528414 CSRNP3Q8WYN3 585 aa6.22□□□□□ -1.41
PTPN22-207ENST00000528414 KIAA0556O60303 1618 aa6.21□□□□□ -1.42
PTPN22-207ENST00000528414 MAGI2Q86UL8 1455 aa6.2□□□□□ -1.42
PTPN22-207ENST00000528414 TAOK2Q9UL54 1235 aa6.19□□□□□ -1.42
PTPN22-207ENST00000528414 AQRO60306 1485 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTPN22-207ENST00000528414 NEO1Q92859 1461 aa6.19□□□□□ -1.42
PTPN22-207ENST00000528414 HOMEZQ8IX15 550 aa6.18□□□□□ -1.42
PTPN22-207ENST00000528414 RANGAP1P46060 587 aaPredicted RBP6.17□□□□□ -1.42
PTPN22-207ENST00000528414 AGLP35573 1532 aa6.17□□□□□ -1.42
PTPN22-207ENST00000528414 ARHGEF12Q9NZN5 1544 aa6.17□□□□□ -1.42
PTPN22-207ENST00000528414 IQGAP2Q13576 1575 aa6.16□□□□□ -1.42
PTPN22-207ENST00000528414 SOGA1O94964 1423 aa6.16□□□□□ -1.42
PTPN22-207ENST00000528414 FAM9AQ8IZU1 332 aaPredicted RBP6.16□□□□□ -1.42
PTPN22-207ENST00000528414 KDM5CP41229 1560 aa6.16□□□□□ -1.42
PTPN22-207ENST00000528414 WDR7Q9Y4E6 1490 aa6.16□□□□□ -1.42
PTPN22-207ENST00000528414 SYNMO15061 1565 aa6.14□□□□□ -1.43
PTPN22-207ENST00000528414 CAMSAP2Q08AD1 1489 aa6.13□□□□□ -1.43
PTPN22-207ENST00000528414 STRCQ7RTU9 1775 aa6.13□□□□□ -1.43
PTPN22-207ENST00000528414 ADGRL1O94910 1474 aa6.12□□□□□ -1.43
PTPN22-207ENST00000528414 DEPDC5O75140 1603 aa6.12□□□□□ -1.43
PTPN22-207ENST00000528414 DISP1Q96F81 1524 aa6.12□□□□□ -1.43
PTPN22-207ENST00000528414 PODXL2Q9NZ53 605 aa6.11□□□□□ -1.43
PTPN22-207ENST00000528414 EFCAB5A4FU69 1503 aa6.11□□□□□ -1.43
PTPN22-207ENST00000528414 KIF14Q15058 1648 aa6.1□□□□□ -1.43
PTPN22-207ENST00000528414 PTPRTO14522 1441 aa6.1□□□□□ -1.43
PTPN22-207ENST00000528414 WRNQ14191 1432 aaPredicted RBP eCLIP6.08□□□□□ -1.44
PTPN22-207ENST00000528414 LAMC1P11047 1609 aa6.08□□□□□ -1.44
PTPN22-207ENST00000528414 FHOD3Q2V2M9 1422 aa6.08□□□□□ -1.44
PTPN22-207ENST00000528414 LTBP4Q8N2S1 1624 aa6.08□□□□□ -1.44
PTPN22-207ENST00000528414 POLR1AO95602 1720 aaPredicted RBP6.07□□□□□ -1.44
PTPN22-207ENST00000528414 ZC3H13Q5T200 1668 aaKnown RBP6.07□□□□□ -1.44
PTPN22-207ENST00000528414 PLXNC1O60486 1568 aa6.07□□□□□ -1.44
PTPN22-207ENST00000528414 KIF21BO75037 1637 aa6.05□□□□□ -1.44
PTPN22-207ENST00000528414 SIGLEC1Q9BZZ2 1709 aa6.05□□□□□ -1.44
PTPN22-207ENST00000528414 RAD54L2Q9Y4B4 1467 aa6.05□□□□□ -1.44
PTPN22-207ENST00000528414 TPRNQ4KMQ1 711 aa6.05□□□□□ -1.44
PTPN22-207ENST00000528414 ITSN2Q9NZM3 1697 aa6.04□□□□□ -1.44
PTPN22-207ENST00000528414 GOLGA3Q08378 1498 aa6.04□□□□□ -1.44
PTPN22-207ENST00000528414 PLA2R1Q13018 1463 aa6.04□□□□□ -1.44
PTPN22-207ENST00000528414 SPATA31D1Q6ZQQ2 1576 aa6.04□□□□□ -1.44
PTPN22-207ENST00000528414 AEBP2Q6ZN18 517 aaPredicted RBP6.03□□□□□ -1.44
PTPN22-207ENST00000528414 GTF3C3Q9Y5Q9 886 aa6.01□□□□□ -1.45
PTPN22-207ENST00000528414 PTPN23Q9H3S7 1636 aa6.01□□□□□ -1.45
PTPN22-207ENST00000528414 COL17A1Q9UMD9 1497 aaPredicted RBP6.01□□□□□ -1.45
PTPN22-207ENST00000528414 MADDQ8WXG6 1647 aa6□□□□□ -1.45
PTPN22-207ENST00000528414 TNIKQ9UKE5 1360 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms