RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
SCN3B-205ENST00000528267 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
SCN3B-205ENST00000528267 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
SCN3B-205ENST00000528267 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
SCN3B-205ENST00000528267 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
SCN3B-205ENST00000528267 CTTNBP2Q8WZ74 1663 aa21.54■■□□□ 1.04
SCN3B-205ENST00000528267 KIF21BO75037 1637 aa21.53■■□□□ 1.04
SCN3B-205ENST00000528267 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
SCN3B-205ENST00000528267 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
SCN3B-205ENST00000528267 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
SCN3B-205ENST00000528267 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
SCN3B-205ENST00000528267 UGGT2Q9NYU1 1516 aa21.39■■□□□ 1.02
SCN3B-205ENST00000528267 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
SCN3B-205ENST00000528267 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
SCN3B-205ENST00000528267 KIAA0556O60303 1618 aa21.34■■□□□ 1.01
SCN3B-205ENST00000528267 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1.01
SCN3B-205ENST00000528267 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
SCN3B-205ENST00000528267 SAMD9Q5K651 1589 aa21.27■■□□□ 1
SCN3B-205ENST00000528267 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
SCN3B-205ENST00000528267 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
SCN3B-205ENST00000528267 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
SCN3B-205ENST00000528267 UBTFP17480 764 aaKnown RBP21.17■□□□□ 0.98
SCN3B-205ENST00000528267 PTPRGP23470 1445 aa21.16■□□□□ 0.98
SCN3B-205ENST00000528267 RANGAP1P46060 587 aaPredicted RBP21.14■□□□□ 0.97
SCN3B-205ENST00000528267 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
SCN3B-205ENST00000528267 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
SCN3B-205ENST00000528267 EFCAB5A4FU69 1503 aa21.12■□□□□ 0.97
SCN3B-205ENST00000528267 ARHGAP35Q9NRY4 1499 aa21.11■□□□□ 0.97
SCN3B-205ENST00000528267 FHOD3Q2V2M9 1422 aa21.11■□□□□ 0.97
SCN3B-205ENST00000528267 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
SCN3B-205ENST00000528267 ABCA8O94911 1581 aa21.09■□□□□ 0.97
SCN3B-205ENST00000528267 LOC105371045A0A1W2PR82 267 aa21.07■□□□□ 0.96
SCN3B-205ENST00000528267 ABCC2Q92887 1545 aa21.07■□□□□ 0.96
SCN3B-205ENST00000528267 UACAQ9BZF9 1416 aa21.06■□□□□ 0.96
SCN3B-205ENST00000528267 UHRF1BP1LA0JNW5 1464 aa21.06■□□□□ 0.96
SCN3B-205ENST00000528267 ZCCHC11Q5TAX3 1644 aaKnown RBP21■□□□□ 0.95
SCN3B-205ENST00000528267 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
SCN3B-205ENST00000528267 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
SCN3B-205ENST00000528267 MAPKBP1O60336 1514 aa20.96■□□□□ 0.95
SCN3B-205ENST00000528267 CLIP1P30622 1438 aa20.95■□□□□ 0.95
SCN3B-205ENST00000528267 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
SCN3B-205ENST00000528267 NUP153P49790 1475 aaKnown RBP20.93■□□□□ 0.94
SCN3B-205ENST00000528267 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
SCN3B-205ENST00000528267 LRRIQ1Q96JM4 1722 aa20.91■□□□□ 0.94
SCN3B-205ENST00000528267 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.93
SCN3B-205ENST00000528267 ATP10BO94823 1461 aa20.88■□□□□ 0.93
SCN3B-205ENST00000528267 DIP2BQ9P265 1576 aa20.87■□□□□ 0.93
SCN3B-205ENST00000528267 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
SCN3B-205ENST00000528267 ASXL2Q76L83 1435 aa20.86■□□□□ 0.93
SCN3B-205ENST00000528267 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
SCN3B-205ENST00000528267 HECW1Q76N89 1606 aa20.82■□□□□ 0.92
SCN3B-205ENST00000528267 ABCC10Q5T3U5 1492 aa20.82■□□□□ 0.92
SCN3B-205ENST00000528267 NPM1P06748 294 aaKnown RBP eCLIP20.82■□□□□ 0.92
SCN3B-205ENST00000528267 CDK13Q14004 1512 aaKnown RBP20.82■□□□□ 0.92
SCN3B-205ENST00000528267 WDR7Q9Y4E6 1490 aa20.78■□□□□ 0.92
SCN3B-205ENST00000528267 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
SCN3B-205ENST00000528267 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
SCN3B-205ENST00000528267 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
SCN3B-205ENST00000528267 GLI2P10070 1586 aa20.74■□□□□ 0.91
SCN3B-205ENST00000528267 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
SCN3B-205ENST00000528267 PPRC1Q5VV67 1664 aaKnown RBP20.72■□□□□ 0.91
SCN3B-205ENST00000528267 MAP3K4Q9Y6R4 1608 aa20.7■□□□□ 0.9
SCN3B-205ENST00000528267 FAM69CQ0P6D2 419 aa20.69■□□□□ 0.9
SCN3B-205ENST00000528267 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
SCN3B-205ENST00000528267 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
SCN3B-205ENST00000528267 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
SCN3B-205ENST00000528267 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
SCN3B-205ENST00000528267 CCDC18Q5T9S5 1454 aa20.64■□□□□ 0.89
SCN3B-205ENST00000528267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SCN3B-205ENST00000528267 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
SCN3B-205ENST00000528267 ABCA9Q8IUA7 1624 aa20.64■□□□□ 0.89
SCN3B-205ENST00000528267 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
SCN3B-205ENST00000528267 KIF14Q15058 1648 aa20.62■□□□□ 0.89
SCN3B-205ENST00000528267 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
SCN3B-205ENST00000528267 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
SCN3B-205ENST00000528267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCN3B-205ENST00000528267 TROQ12816 1431 aaPredicted RBP20.57■□□□□ 0.88
SCN3B-205ENST00000528267 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
SCN3B-205ENST00000528267 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
SCN3B-205ENST00000528267 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
SCN3B-205ENST00000528267 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
SCN3B-205ENST00000528267 MYO5CQ9NQX4 1742 aa20.47■□□□□ 0.87
SCN3B-205ENST00000528267 MAP3K1Q13233 1512 aa20.46■□□□□ 0.87
SCN3B-205ENST00000528267 COL17A1Q9UMD9 1497 aaPredicted RBP20.45■□□□□ 0.86
SCN3B-205ENST00000528267 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
SCN3B-205ENST00000528267 CDK11AQ9UQ88 783 aaPredicted RBP20.45■□□□□ 0.86
SCN3B-205ENST00000528267 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
SCN3B-205ENST00000528267 TEX14Q8IWB6 1497 aa20.43■□□□□ 0.86
SCN3B-205ENST00000528267 KDM6BO15054 1643 aa20.42■□□□□ 0.86
SCN3B-205ENST00000528267 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
SCN3B-205ENST00000528267 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
SCN3B-205ENST00000528267 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
SCN3B-205ENST00000528267 PLCH2O75038 1416 aa20.4■□□□□ 0.86
SCN3B-205ENST00000528267 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
SCN3B-205ENST00000528267 ARAP3Q8WWN8 1544 aa20.38■□□□□ 0.85
SCN3B-205ENST00000528267 SUPT6HQ7KZ85 1726 aaKnown RBP20.38■□□□□ 0.85
SCN3B-205ENST00000528267 FANCAO15360 1455 aa20.37■□□□□ 0.85
SCN3B-205ENST00000528267 NEO1Q92859 1461 aa20.37■□□□□ 0.85
SCN3B-205ENST00000528267 GPATCH8Q9UKJ3 1502 aaKnown RBP20.36■□□□□ 0.85
SCN3B-205ENST00000528267 FRMPD1Q5SYB0 1578 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms