RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 IGF1RP08069 1367 aa45.21■■■■■ 4.83
TRIM3-206ENST00000528227 CUL7Q14999 1698 aa45.16■■■■■ 4.82
TRIM3-206ENST00000528227 KIAA0586Q9BVV6 1533 aa45.04■■■■■ 4.8
TRIM3-206ENST00000528227 CARMIL1Q5VZK9 1371 aa44.92■■■■■ 4.78
TRIM3-206ENST00000528227 KIF13AQ9H1H9 1805 aa44.84■■■■■ 4.77
TRIM3-206ENST00000528227 ADCY10Q96PN6 1610 aa44.79■■■■■ 4.76
TRIM3-206ENST00000528227 NPM1P06748 294 aaKnown RBP eCLIP44.72■■■■■ 4.75
TRIM3-206ENST00000528227 MAPKBP1O60336 1514 aa44.71■■■■■ 4.75
TRIM3-206ENST00000528227 ABCC10Q5T3U5 1492 aa44.65■■■■■ 4.74
TRIM3-206ENST00000528227 IQGAP2Q13576 1575 aa44.64■■■■■ 4.74
TRIM3-206ENST00000528227 PTPRGP23470 1445 aa44.58■■■■■ 4.73
TRIM3-206ENST00000528227 CARMIL2Q6F5E8 1435 aa44.57■■■■■ 4.72
TRIM3-206ENST00000528227 FAM69CQ0P6D2 419 aa44.56■■■■■ 4.72
TRIM3-206ENST00000528227 DIP2BQ9P265 1576 aa44.56■■■■■ 4.72
TRIM3-206ENST00000528227 TNIKQ9UKE5 1360 aa44.53■■■■■ 4.72
TRIM3-206ENST00000528227 RAPGEF2Q9Y4G8 1499 aa44.53■■■■■ 4.72
TRIM3-206ENST00000528227 TTBK1Q5TCY1 1321 aaPredicted RBP44.45■■■■■ 4.71
TRIM3-206ENST00000528227 DISP1Q96F81 1524 aa44.42■■■■■ 4.7
TRIM3-206ENST00000528227 ABCC2Q92887 1545 aa44.36■■■■■ 4.69
TRIM3-206ENST00000528227 UGGT2Q9NYU1 1516 aa44.36■■■■■ 4.69
TRIM3-206ENST00000528227 AEBP2Q6ZN18 517 aaPredicted RBP44.36■■■■■ 4.69
TRIM3-206ENST00000528227 UHRF1BP1LA0JNW5 1464 aa44.31■■■■■ 4.68
TRIM3-206ENST00000528227 UACAQ9BZF9 1416 aa44.26■■■■■ 4.68
TRIM3-206ENST00000528227 KIAA0556O60303 1618 aa44.24■■■■■ 4.67
TRIM3-206ENST00000528227 TSPOAP1O95153 1857 aa44.2■■■■■ 4.67
TRIM3-206ENST00000528227 CTTNBP2Q8WZ74 1663 aa44.19■■■■■ 4.67
TRIM3-206ENST00000528227 ASXL2Q76L83 1435 aa44.19■■■■■ 4.66
TRIM3-206ENST00000528227 PLB1Q6P1J6 1458 aa44.16■■■■■ 4.66
TRIM3-206ENST00000528227 KDM6BO15054 1643 aa44.13■■■■■ 4.65
TRIM3-206ENST00000528227 PRXQ9BXM0 1461 aa44.11■■■■■ 4.65
TRIM3-206ENST00000528227 KDM5BQ9UGL1 1544 aa44.1■■■■■ 4.65
TRIM3-206ENST00000528227 GLI2P10070 1586 aa44.09■■■■■ 4.65
TRIM3-206ENST00000528227 ZCCHC11Q5TAX3 1644 aaKnown RBP44.02■■■■■ 4.64
TRIM3-206ENST00000528227 GOLGA3Q08378 1498 aa43.99■■■■■ 4.63
TRIM3-206ENST00000528227 PPRC1Q5VV67 1664 aaKnown RBP43.97■■■■■ 4.63
TRIM3-206ENST00000528227 EPRSP07814 1512 aaKnown RBP43.94■■■■■ 4.62
TRIM3-206ENST00000528227 MAP3K4Q9Y6R4 1608 aa43.86■■■■■ 4.61
TRIM3-206ENST00000528227 ABCA8O94911 1581 aa43.83■■■■■ 4.61
TRIM3-206ENST00000528227 WDR7Q9Y4E6 1490 aa43.79■■■■■ 4.6
TRIM3-206ENST00000528227 CSRNP3Q8WYN3 585 aa43.75■■■■■ 4.59
TRIM3-206ENST00000528227 TEX14Q8IWB6 1497 aa43.69■■■■■ 4.58
TRIM3-206ENST00000528227 COL17A1Q9UMD9 1497 aaPredicted RBP43.64■■■■■ 4.58
TRIM3-206ENST00000528227 KDM4FA0A1W2PPD8 638 aa43.62■■■■■ 4.57
TRIM3-206ENST00000528227 EEA1Q15075 1411 aa43.61■■■■■ 4.57
TRIM3-206ENST00000528227 P3H3Q8IVL6 736 aa43.58■■■■■ 4.57
TRIM3-206ENST00000528227 SAMD9Q5K651 1589 aa43.58■■■■■ 4.57
TRIM3-206ENST00000528227 CFAP43Q8NDM7 1665 aa43.53■■■■■ 4.56
TRIM3-206ENST00000528227 FAM9AQ8IZU1 332 aaPredicted RBP43.52■■■■■ 4.56
TRIM3-206ENST00000528227 KCNH8Q96L42 1107 aa43.51■■■■■ 4.56
TRIM3-206ENST00000528227 CD109Q6YHK3 1445 aa43.49■■■■■ 4.55
TRIM3-206ENST00000528227 MAGI3Q5TCQ9 1506 aa43.48■■■■■ 4.55
TRIM3-206ENST00000528227 ATP10BO94823 1461 aa43.45■■■■■ 4.55
TRIM3-206ENST00000528227 ARID3CA6NKF2 412 aa43.4■■■■■ 4.54
TRIM3-206ENST00000528227 RAPGEF6Q8TEU7 1601 aa43.37■■■■■ 4.53
TRIM3-206ENST00000528227 ADGRL1O94910 1474 aa43.32■■■■■ 4.53
TRIM3-206ENST00000528227 KIF21BO75037 1637 aa43.3■■■■■ 4.52
TRIM3-206ENST00000528227 RANGAP1P46060 587 aaPredicted RBP43.26■■■■■ 4.52
TRIM3-206ENST00000528227 FHOD3Q2V2M9 1422 aa43.25■■■■■ 4.51
TRIM3-206ENST00000528227 ABCA9Q8IUA7 1624 aa43.22■■■■■ 4.51
TRIM3-206ENST00000528227 NUP153P49790 1475 aaKnown RBP43.21■■■■■ 4.51
TRIM3-206ENST00000528227 EFCAB5A4FU69 1503 aa43.14■■■■■ 4.5
TRIM3-206ENST00000528227 ARAP3Q8WWN8 1544 aa43.14■■■■■ 4.5
TRIM3-206ENST00000528227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.13■■■■■ 4.49
TRIM3-206ENST00000528227 HNRNPUL2Q1KMD3 747 aaKnown RBP43.13■■■■■ 4.49
TRIM3-206ENST00000528227 PHLDB1Q86UU1 1377 aa43.03■■■■■ 4.48
TRIM3-206ENST00000528227 CHIC1Q5VXU3 224 aa43.02■■■■■ 4.48
TRIM3-206ENST00000528227 NEO1Q92859 1461 aa42.98■■■■■ 4.47
TRIM3-206ENST00000528227 PLEKHD1A6NEE1 506 aa42.93■■■■■ 4.46
TRIM3-206ENST00000528227 UBTFP17480 764 aaKnown RBP42.89■■■■■ 4.46
TRIM3-206ENST00000528227 EHMT2Q96KQ7 1210 aa42.88■■■■■ 4.45
TRIM3-206ENST00000528227 RAPGEF3O95398 923 aa42.84■■■■■ 4.45
TRIM3-206ENST00000528227 FRMPD1Q5SYB0 1578 aa42.82■■■■■ 4.44
TRIM3-206ENST00000528227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP42.81■■■■■ 4.44
TRIM3-206ENST00000528227 CDK13Q14004 1512 aaKnown RBP42.8■■■■■ 4.44
TRIM3-206ENST00000528227 ARHGAP35Q9NRY4 1499 aa42.77■■■■■ 4.44
TRIM3-206ENST00000528227 TTC37Q6PGP7 1564 aa42.75■■■■■ 4.43
TRIM3-206ENST00000528227 FMN1Q68DA7 1419 aa42.74■■■■■ 4.43
TRIM3-206ENST00000528227 CFAP74Q9C0B2 1584 aa42.7■■■■■ 4.43
TRIM3-206ENST00000528227 FANCAO15360 1455 aa42.7■■■■■ 4.43
TRIM3-206ENST00000528227 HECW2Q9P2P5 1572 aa42.69■■■■■ 4.43
TRIM3-206ENST00000528227 HECW1Q76N89 1606 aa42.69■■■■■ 4.42
TRIM3-206ENST00000528227 AKNAQ7Z591 1439 aa42.69■■■■■ 4.42
TRIM3-206ENST00000528227 DENND4BO75064 1496 aaPredicted RBP42.66■■■■■ 4.42
TRIM3-206ENST00000528227 RICTORQ6R327 1708 aa42.65■■■■■ 4.42
TRIM3-206ENST00000528227 ADAMTSL3P82987 1691 aa42.61■■■■■ 4.41
TRIM3-206ENST00000528227 ATP1B4Q9UN42 357 aaPredicted RBP42.59■■■■■ 4.41
TRIM3-206ENST00000528227 ARHGEF40Q8TER5 1519 aa42.57■■■■■ 4.41
TRIM3-206ENST00000528227 BCORL1Q5H9F3 1711 aa42.53■■■■■ 4.4
TRIM3-206ENST00000528227 PLCH2O75038 1416 aa42.52■■■■■ 4.4
TRIM3-206ENST00000528227 ZMYM4Q5VZL5 1548 aa42.5■■■■■ 4.39
TRIM3-206ENST00000528227 CDK11AQ9UQ88 783 aaPredicted RBP42.48■■■■■ 4.39
TRIM3-206ENST00000528227 PTPRMP28827 1452 aa42.48■■■■■ 4.39
TRIM3-206ENST00000528227 ARID4BQ4LE39 1312 aaPredicted RBP42.46■■■■■ 4.39
TRIM3-206ENST00000528227 LRRIQ1Q96JM4 1722 aa42.45■■■■■ 4.39
TRIM3-206ENST00000528227 MYO5CQ9NQX4 1742 aa42.43■■■■■ 4.38
TRIM3-206ENST00000528227 KIF14Q15058 1648 aa42.42■■■■■ 4.38
TRIM3-206ENST00000528227 MADDQ8WXG6 1647 aa42.42■■■■■ 4.38
TRIM3-206ENST00000528227 TROQ12816 1431 aaPredicted RBP42.4■■■■■ 4.38
TRIM3-206ENST00000528227 ZFYVE16Q7Z3T8 1539 aa42.4■■■■■ 4.38
TRIM3-206ENST00000528227 SCAPERQ9BY12 1400 aa42.39■■■■■ 4.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms