RNA–Protein interactions for RNA: ENST00000528182.5

SDHD-206, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-206ENST00000528182 IGF1RP08069 1367 aa31.31■■■□□ 2.6
SDHD-206ENST00000528182 CUL7Q14999 1698 aa31.29■■■□□ 2.6
SDHD-206ENST00000528182 KIAA0586Q9BVV6 1533 aa31.24■■■□□ 2.59
SDHD-206ENST00000528182 KIF13AQ9H1H9 1805 aa31.22■■■□□ 2.59
SDHD-206ENST00000528182 NPM1P06748 294 aaKnown RBP eCLIP31.16■■■□□ 2.58
SDHD-206ENST00000528182 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
SDHD-206ENST00000528182 CARMIL1Q5VZK9 1371 aa31.11■■■□□ 2.57
SDHD-206ENST00000528182 ADCY10Q96PN6 1610 aa31.1■■■□□ 2.57
SDHD-206ENST00000528182 MAPKBP1O60336 1514 aa31.08■■■□□ 2.57
SDHD-206ENST00000528182 ABCC10Q5T3U5 1492 aa31.07■■■□□ 2.56
SDHD-206ENST00000528182 FAM69CQ0P6D2 419 aa31.05■■■□□ 2.56
SDHD-206ENST00000528182 DIP2BQ9P265 1576 aa30.98■■■□□ 2.55
SDHD-206ENST00000528182 PTPRGP23470 1445 aa30.97■■■□□ 2.55
SDHD-206ENST00000528182 CARMIL2Q6F5E8 1435 aa30.95■■■□□ 2.54
SDHD-206ENST00000528182 IQGAP2Q13576 1575 aa30.94■■■□□ 2.54
SDHD-206ENST00000528182 TNIKQ9UKE5 1360 aa30.91■■■□□ 2.54
SDHD-206ENST00000528182 TTBK1Q5TCY1 1321 aaPredicted RBP30.9■■■□□ 2.54
SDHD-206ENST00000528182 RAPGEF2Q9Y4G8 1499 aa30.83■■■□□ 2.53
SDHD-206ENST00000528182 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
SDHD-206ENST00000528182 TSPOAP1O95153 1857 aa30.8■■■□□ 2.52
SDHD-206ENST00000528182 DISP1Q96F81 1524 aa30.78■■■□□ 2.52
SDHD-206ENST00000528182 UHRF1BP1LA0JNW5 1464 aa30.75■■■□□ 2.51
SDHD-206ENST00000528182 KDM6BO15054 1643 aa30.74■■■□□ 2.51
SDHD-206ENST00000528182 UACAQ9BZF9 1416 aa30.73■■■□□ 2.51
SDHD-206ENST00000528182 UGGT2Q9NYU1 1516 aa30.73■■■□□ 2.51
SDHD-206ENST00000528182 ASXL2Q76L83 1435 aa30.71■■■□□ 2.51
SDHD-206ENST00000528182 PLB1Q6P1J6 1458 aa30.7■■■□□ 2.51
SDHD-206ENST00000528182 KIAA0556O60303 1618 aa30.65■■■□□ 2.5
SDHD-206ENST00000528182 GLI2P10070 1586 aa30.64■■■□□ 2.5
SDHD-206ENST00000528182 KDM5BQ9UGL1 1544 aa30.61■■■□□ 2.49
SDHD-206ENST00000528182 CTTNBP2Q8WZ74 1663 aa30.61■■■□□ 2.49
SDHD-206ENST00000528182 PPRC1Q5VV67 1664 aaKnown RBP30.56■■■□□ 2.48
SDHD-206ENST00000528182 ZCCHC11Q5TAX3 1644 aaKnown RBP30.55■■■□□ 2.48
SDHD-206ENST00000528182 EPRSP07814 1512 aaKnown RBP30.52■■■□□ 2.48
SDHD-206ENST00000528182 GOLGA3Q08378 1498 aa30.5■■■□□ 2.47
SDHD-206ENST00000528182 PRXQ9BXM0 1461 aa30.49■■■□□ 2.47
SDHD-206ENST00000528182 MAP3K4Q9Y6R4 1608 aa30.47■■■□□ 2.47
SDHD-206ENST00000528182 KDM4FA0A1W2PPD8 638 aa30.44■■■□□ 2.46
SDHD-206ENST00000528182 TEX14Q8IWB6 1497 aa30.4■■■□□ 2.46
SDHD-206ENST00000528182 WDR7Q9Y4E6 1490 aa30.4■■■□□ 2.46
SDHD-206ENST00000528182 ABCA8O94911 1581 aa30.37■■■□□ 2.45
SDHD-206ENST00000528182 COL17A1Q9UMD9 1497 aaPredicted RBP30.34■■■□□ 2.45
SDHD-206ENST00000528182 FAM9AQ8IZU1 332 aaPredicted RBP30.27■■■□□ 2.44
SDHD-206ENST00000528182 CSRNP3Q8WYN3 585 aa30.25■■■□□ 2.43
SDHD-206ENST00000528182 KCNH8Q96L42 1107 aa30.25■■■□□ 2.43
SDHD-206ENST00000528182 CFAP43Q8NDM7 1665 aa30.25■■■□□ 2.43
SDHD-206ENST00000528182 CD109Q6YHK3 1445 aa30.22■■■□□ 2.43
SDHD-206ENST00000528182 P3H3Q8IVL6 736 aa30.21■■■□□ 2.43
SDHD-206ENST00000528182 MAGI3Q5TCQ9 1506 aa30.21■■■□□ 2.43
SDHD-206ENST00000528182 ADGRL1O94910 1474 aa30.19■■■□□ 2.42
SDHD-206ENST00000528182 SAMD9Q5K651 1589 aa30.15■■■□□ 2.42
SDHD-206ENST00000528182 ATP10BO94823 1461 aa30.12■■■□□ 2.41
SDHD-206ENST00000528182 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
SDHD-206ENST00000528182 EEA1Q15075 1411 aa30.12■■■□□ 2.41
SDHD-206ENST00000528182 RAPGEF6Q8TEU7 1601 aa30.05■■■□□ 2.4
SDHD-206ENST00000528182 ABCA9Q8IUA7 1624 aa30■■■□□ 2.39
SDHD-206ENST00000528182 RANGAP1P46060 587 aaPredicted RBP29.98■■■□□ 2.39
SDHD-206ENST00000528182 ARAP3Q8WWN8 1544 aa29.97■■■□□ 2.39
SDHD-206ENST00000528182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.96■■■□□ 2.39
SDHD-206ENST00000528182 HNRNPUL2Q1KMD3 747 aaKnown RBP29.96■■■□□ 2.39
SDHD-206ENST00000528182 FHOD3Q2V2M9 1422 aa29.93■■■□□ 2.38
SDHD-206ENST00000528182 PHLDB1Q86UU1 1377 aa29.92■■■□□ 2.38
SDHD-206ENST00000528182 NUP153P49790 1475 aaKnown RBP29.92■■■□□ 2.38
SDHD-206ENST00000528182 KIF21BO75037 1637 aa29.89■■■□□ 2.37
SDHD-206ENST00000528182 NEO1Q92859 1461 aa29.85■■■□□ 2.37
SDHD-206ENST00000528182 EFCAB5A4FU69 1503 aa29.84■■■□□ 2.37
SDHD-206ENST00000528182 PLEKHD1A6NEE1 506 aa29.81■■■□□ 2.36
SDHD-206ENST00000528182 HECW2Q9P2P5 1572 aa29.8■■■□□ 2.36
SDHD-206ENST00000528182 RAPGEF3O95398 923 aa29.78■■■□□ 2.36
SDHD-206ENST00000528182 FRMPD1Q5SYB0 1578 aa29.7■■■□□ 2.35
SDHD-206ENST00000528182 UBTFP17480 764 aaKnown RBP29.68■■■□□ 2.34
SDHD-206ENST00000528182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.67■■■□□ 2.345e-8■■■■■ 28.6
SDHD-206ENST00000528182 EHMT2Q96KQ7 1210 aa29.65■■■□□ 2.34
SDHD-206ENST00000528182 CFAP74Q9C0B2 1584 aa29.64■■■□□ 2.34
SDHD-206ENST00000528182 ADAMTSL3P82987 1691 aa29.64■■■□□ 2.34
SDHD-206ENST00000528182 FANCAO15360 1455 aa29.64■■■□□ 2.34
SDHD-206ENST00000528182 AKNAQ7Z591 1439 aa29.63■■■□□ 2.33
SDHD-206ENST00000528182 DENND4BO75064 1496 aaPredicted RBP29.62■■■□□ 2.33
SDHD-206ENST00000528182 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
SDHD-206ENST00000528182 TTC37Q6PGP7 1564 aa29.62■■■□□ 2.33
SDHD-206ENST00000528182 CHIC1Q5VXU3 224 aa29.62■■■□□ 2.33
SDHD-206ENST00000528182 RICTORQ6R327 1708 aa29.61■■■□□ 2.33
SDHD-206ENST00000528182 ARID4BQ4LE39 1312 aaPredicted RBP29.59■■■□□ 2.33
SDHD-206ENST00000528182 PTPRMP28827 1452 aa29.58■■■□□ 2.33
SDHD-206ENST00000528182 BCORL1Q5H9F3 1711 aa29.58■■■□□ 2.33
SDHD-206ENST00000528182 FMN1Q68DA7 1419 aa29.58■■■□□ 2.33
SDHD-206ENST00000528182 ILDR1Q86SU0 546 aaPredicted RBP29.57■■■□□ 2.32
SDHD-206ENST00000528182 ARHGEF40Q8TER5 1519 aa29.56■■■□□ 2.32
SDHD-206ENST00000528182 HECW1Q76N89 1606 aa29.56■■■□□ 2.32
SDHD-206ENST00000528182 ARHGAP35Q9NRY4 1499 aa29.55■■■□□ 2.32
SDHD-206ENST00000528182 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
SDHD-206ENST00000528182 MADDQ8WXG6 1647 aa29.5■■■□□ 2.31
SDHD-206ENST00000528182 ZMYM4Q5VZL5 1548 aa29.5■■■□□ 2.31
SDHD-206ENST00000528182 PLCH2O75038 1416 aa29.49■■■□□ 2.31
SDHD-206ENST00000528182 CDK11AQ9UQ88 783 aaPredicted RBP29.48■■■□□ 2.31
SDHD-206ENST00000528182 ZFYVE16Q7Z3T8 1539 aa29.45■■■□□ 2.3
SDHD-206ENST00000528182 MAGI2Q86UL8 1455 aa29.44■■■□□ 2.3
SDHD-206ENST00000528182 MYO5CQ9NQX4 1742 aa29.43■■■□□ 2.3
SDHD-206ENST00000528182 SCAPERQ9BY12 1400 aa29.43■■■□□ 2.3
SDHD-206ENST00000528182 YEATS2Q9ULM3 1422 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms