RNA–Protein interactions for RNA: ENST00000527934.1

SORL1-206, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-206ENST00000527934 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
SORL1-206ENST00000527934 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
SORL1-206ENST00000527934 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.22
SORL1-206ENST00000527934 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
SORL1-206ENST00000527934 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.29e-7■■■■□ 22.8
SORL1-206ENST00000527934 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
SORL1-206ENST00000527934 CCNB3Q8WWL7 1395 aa16.31■□□□□ 0.2
SORL1-206ENST00000527934 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.2
SORL1-206ENST00000527934 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
SORL1-206ENST00000527934 TIAM1Q13009 1591 aa16.27■□□□□ 0.19
SORL1-206ENST00000527934 PHLDB1Q86UU1 1377 aa16.26■□□□□ 0.19
SORL1-206ENST00000527934 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
SORL1-206ENST00000527934 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
SORL1-206ENST00000527934 WDR97A6NE52 1622 aa16.26■□□□□ 0.19
SORL1-206ENST00000527934 CUL7Q14999 1698 aa16.26■□□□□ 0.19
SORL1-206ENST00000527934 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
SORL1-206ENST00000527934 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
SORL1-206ENST00000527934 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
SORL1-206ENST00000527934 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
SORL1-206ENST00000527934 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
SORL1-206ENST00000527934 DHX57Q6P158 1386 aaKnown RBP16.22■□□□□ 0.19
SORL1-206ENST00000527934 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
SORL1-206ENST00000527934 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
SORL1-206ENST00000527934 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
SORL1-206ENST00000527934 CTTNBP2Q8WZ74 1663 aa16.18■□□□□ 0.18
SORL1-206ENST00000527934 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
SORL1-206ENST00000527934 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
SORL1-206ENST00000527934 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
SORL1-206ENST00000527934 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
SORL1-206ENST00000527934 FMN1Q68DA7 1419 aa16.14■□□□□ 0.17
SORL1-206ENST00000527934 FBLN2P98095 1184 aa16.14■□□□□ 0.17
SORL1-206ENST00000527934 MAP3K1Q13233 1512 aa16.14■□□□□ 0.17
SORL1-206ENST00000527934 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
SORL1-206ENST00000527934 MTUS2Q5JR59 1369 aa16.13■□□□□ 0.17
SORL1-206ENST00000527934 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
SORL1-206ENST00000527934 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
SORL1-206ENST00000527934 PBRM1Q86U86 1689 aa16.08■□□□□ 0.17
SORL1-206ENST00000527934 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.16
SORL1-206ENST00000527934 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
SORL1-206ENST00000527934 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
SORL1-206ENST00000527934 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
SORL1-206ENST00000527934 SETD5Q9C0A6 1442 aa16.05■□□□□ 0.16
SORL1-206ENST00000527934 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
SORL1-206ENST00000527934 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
SORL1-206ENST00000527934 WDR62O43379 1518 aa16.04■□□□□ 0.16
SORL1-206ENST00000527934 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
SORL1-206ENST00000527934 CLSPNQ9HAW4 1339 aa16.01■□□□□ 0.15
SORL1-206ENST00000527934 MIER1Q8N108 512 aa16.01■□□□□ 0.15
SORL1-206ENST00000527934 YTHDC1Q96MU7 727 aaKnown RBP16.01■□□□□ 0.15
SORL1-206ENST00000527934 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
SORL1-206ENST00000527934 FGD6Q6ZV73 1430 aa16■□□□□ 0.15
SORL1-206ENST00000527934 EIF5BO60841 1220 aaKnown RBP16■□□□□ 0.15
SORL1-206ENST00000527934 CHIC2Q9UKJ5 165 aa16■□□□□ 0.15
SORL1-206ENST00000527934 LRRIQ1Q96JM4 1722 aa16■□□□□ 0.15
SORL1-206ENST00000527934 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
SORL1-206ENST00000527934 CDK13Q14004 1512 aaKnown RBP15.97■□□□□ 0.15
SORL1-206ENST00000527934 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
SORL1-206ENST00000527934 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
SORL1-206ENST00000527934 PTPRKQ15262 1439 aa15.96■□□□□ 0.15
SORL1-206ENST00000527934 CENPBP07199 599 aaPredicted RBP15.95■□□□□ 0.14
SORL1-206ENST00000527934 RRP7BPQ9NSQ0 103 aa15.95■□□□□ 0.14
SORL1-206ENST00000527934 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
SORL1-206ENST00000527934 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
SORL1-206ENST00000527934 MYOM3Q5VTT5 1437 aa15.92■□□□□ 0.14
SORL1-206ENST00000527934 EPRSP07814 1512 aaKnown RBP15.91■□□□□ 0.14
SORL1-206ENST00000527934 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
SORL1-206ENST00000527934 KIAA0586Q9BVV6 1533 aa15.91■□□□□ 0.14
SORL1-206ENST00000527934 DISP1Q96F81 1524 aa15.89■□□□□ 0.13
SORL1-206ENST00000527934 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
SORL1-206ENST00000527934 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
SORL1-206ENST00000527934 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
SORL1-206ENST00000527934 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
SORL1-206ENST00000527934 HIRIP3Q9BW71 556 aaPredicted RBP15.87■□□□□ 0.13
SORL1-206ENST00000527934 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
SORL1-206ENST00000527934 SUPT6HQ7KZ85 1726 aaKnown RBP15.86■□□□□ 0.13
SORL1-206ENST00000527934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.86■□□□□ 0.13
SORL1-206ENST00000527934 CCDC18Q5T9S5 1454 aa15.86■□□□□ 0.13
SORL1-206ENST00000527934 ZNF644Q9H582 1327 aaPredicted RBP15.86■□□□□ 0.13
SORL1-206ENST00000527934 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
SORL1-206ENST00000527934 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
SORL1-206ENST00000527934 SYNJ2O15056 1496 aa15.83■□□□□ 0.13
SORL1-206ENST00000527934 CEP170Q5SW79 1584 aa15.83■□□□□ 0.12
SORL1-206ENST00000527934 MAGI1Q96QZ7 1491 aaPredicted RBP15.82■□□□□ 0.12
SORL1-206ENST00000527934 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
SORL1-206ENST00000527934 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
SORL1-206ENST00000527934 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
SORL1-206ENST00000527934 NAIPQ13075 1403 aa15.81■□□□□ 0.12
SORL1-206ENST00000527934 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
SORL1-206ENST00000527934 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
SORL1-206ENST00000527934 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
SORL1-206ENST00000527934 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
SORL1-206ENST00000527934 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
SORL1-206ENST00000527934 FOXD1Q16676 465 aa15.78■□□□□ 0.12
SORL1-206ENST00000527934 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
SORL1-206ENST00000527934 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
SORL1-206ENST00000527934 PPP1R15AO75807 674 aaPredicted RBP15.74■□□□□ 0.11
SORL1-206ENST00000527934 RAPGEF6Q8TEU7 1601 aa15.74■□□□□ 0.11
SORL1-206ENST00000527934 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
SORL1-206ENST00000527934 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
SORL1-206ENST00000527934 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms