RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 JPH4Q96JJ6 628 aa56.52■■■■■ 6.64
SSSCA1-205ENST00000527920 KIAA0586Q9BVV6 1533 aa56.48■■■■■ 6.63
SSSCA1-205ENST00000527920 PRG4Q92954 1404 aaPredicted RBP56.47■■■■■ 6.63
SSSCA1-205ENST00000527920 RAPGEF2Q9Y4G8 1499 aa56.19■■■■■ 6.59
SSSCA1-205ENST00000527920 TRHP20396 242 aaPredicted RBP56.14■■■■■ 6.58
SSSCA1-205ENST00000527920 IQGAP2Q13576 1575 aa56.02■■■■■ 6.56
SSSCA1-205ENST00000527920 CARMIL2Q6F5E8 1435 aa55.88■■■■■ 6.54
SSSCA1-205ENST00000527920 PRXQ9BXM0 1461 aa55.88■■■■■ 6.54
SSSCA1-205ENST00000527920 UGGT2Q9NYU1 1516 aa55.75■■■■■ 6.52
SSSCA1-205ENST00000527920 TNIKQ9UKE5 1360 aa55.74■■■■■ 6.51
SSSCA1-205ENST00000527920 PTPRGP23470 1445 aa55.72■■■■■ 6.51
SSSCA1-205ENST00000527920 DISP1Q96F81 1524 aa55.68■■■■■ 6.5
SSSCA1-205ENST00000527920 ADCY10Q96PN6 1610 aa55.67■■■■■ 6.5
SSSCA1-205ENST00000527920 EEA1Q15075 1411 aa55.66■■■■■ 6.5
SSSCA1-205ENST00000527920 CSRNP3Q8WYN3 585 aa55.61■■■■■ 6.49
SSSCA1-205ENST00000527920 NPM1P06748 294 aaKnown RBP eCLIP55.59■■■■■ 6.49
SSSCA1-205ENST00000527920 CTTNBP2Q8WZ74 1663 aa55.59■■■■■ 6.49
SSSCA1-205ENST00000527920 MAPKBP1O60336 1514 aa55.53■■■■■ 6.48
SSSCA1-205ENST00000527920 KIAA0556O60303 1618 aa55.48■■■■■ 6.47
SSSCA1-205ENST00000527920 UHRF1BP1LA0JNW5 1464 aa55.39■■■■■ 6.46
SSSCA1-205ENST00000527920 GOLGA3Q08378 1498 aa55.38■■■■■ 6.46
SSSCA1-205ENST00000527920 TTBK1Q5TCY1 1321 aaPredicted RBP55.38■■■■■ 6.46
SSSCA1-205ENST00000527920 CHIC1Q5VXU3 224 aa55.36■■■■■ 6.45
SSSCA1-205ENST00000527920 UACAQ9BZF9 1416 aa55.36■■■■■ 6.45
SSSCA1-205ENST00000527920 ABCC2Q92887 1545 aa55.35■■■■■ 6.45
SSSCA1-205ENST00000527920 ABCC10Q5T3U5 1492 aa55.34■■■■■ 6.45
SSSCA1-205ENST00000527920 KIF13AQ9H1H9 1805 aa55.29■■■■■ 6.44
SSSCA1-205ENST00000527920 DIP2BQ9P265 1576 aa55.19■■■■■ 6.42
SSSCA1-205ENST00000527920 FAM69CQ0P6D2 419 aa55.16■■■■■ 6.42
SSSCA1-205ENST00000527920 FAM9AQ8IZU1 332 aaPredicted RBP55.11■■■■■ 6.41
SSSCA1-205ENST00000527920 KDM5BQ9UGL1 1544 aa55.11■■■■■ 6.41
SSSCA1-205ENST00000527920 KIF21BO75037 1637 aa55.06■■■■■ 6.41
SSSCA1-205ENST00000527920 PLB1Q6P1J6 1458 aa55.05■■■■■ 6.4
SSSCA1-205ENST00000527920 ASXL2Q76L83 1435 aa55.02■■■■■ 6.4
SSSCA1-205ENST00000527920 ABCA8O94911 1581 aa54.94■■■■■ 6.39
SSSCA1-205ENST00000527920 SAMD9Q5K651 1589 aa54.93■■■■■ 6.38
SSSCA1-205ENST00000527920 ZCCHC11Q5TAX3 1644 aaKnown RBP54.88■■■■■ 6.38
SSSCA1-205ENST00000527920 GLI2P10070 1586 aa54.82■■■■■ 6.37
SSSCA1-205ENST00000527920 P3H3Q8IVL6 736 aa54.76■■■■■ 6.36
SSSCA1-205ENST00000527920 EPRSP07814 1512 aaKnown RBP54.71■■■■■ 6.35
SSSCA1-205ENST00000527920 WDR7Q9Y4E6 1490 aa54.67■■■■■ 6.34
SSSCA1-205ENST00000527920 EFCAB5A4FU69 1503 aa54.62■■■■■ 6.33
SSSCA1-205ENST00000527920 TSPOAP1O95153 1857 aa54.56■■■■■ 6.32
SSSCA1-205ENST00000527920 FHOD3Q2V2M9 1422 aa54.53■■■■■ 6.32
SSSCA1-205ENST00000527920 RANGAP1P46060 587 aaPredicted RBP54.52■■■■■ 6.32
SSSCA1-205ENST00000527920 UBTFP17480 764 aaKnown RBP54.5■■■■■ 6.32
SSSCA1-205ENST00000527920 RAPGEF6Q8TEU7 1601 aa54.49■■■■■ 6.31
SSSCA1-205ENST00000527920 MAP3K4Q9Y6R4 1608 aa54.48■■■■■ 6.31
SSSCA1-205ENST00000527920 ATP10BO94823 1461 aa54.47■■■■■ 6.31
SSSCA1-205ENST00000527920 PPRC1Q5VV67 1664 aaKnown RBP54.45■■■■■ 6.31
SSSCA1-205ENST00000527920 KDM6BO15054 1643 aa54.42■■■■■ 6.3
SSSCA1-205ENST00000527920 EHMT2Q96KQ7 1210 aa54.35■■■■■ 6.29
SSSCA1-205ENST00000527920 NUP153P49790 1475 aaKnown RBP54.34■■■■■ 6.29
SSSCA1-205ENST00000527920 TEX14Q8IWB6 1497 aa54.34■■■■■ 6.29
SSSCA1-205ENST00000527920 ARID3CA6NKF2 412 aa54.28■■■■■ 6.28
SSSCA1-205ENST00000527920 KCNH8Q96L42 1107 aa54.25■■■■■ 6.28
SSSCA1-205ENST00000527920 CFAP43Q8NDM7 1665 aa54.24■■■■■ 6.27
SSSCA1-205ENST00000527920 CD109Q6YHK3 1445 aa54.2■■■■■ 6.27
SSSCA1-205ENST00000527920 ARHGAP35Q9NRY4 1499 aa54.2■■■■■ 6.27
SSSCA1-205ENST00000527920 MAGI3Q5TCQ9 1506 aa54.19■■■■■ 6.27
SSSCA1-205ENST00000527920 FMN1Q68DA7 1419 aa54.11■■■■■ 6.25
SSSCA1-205ENST00000527920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP54.08■■■■■ 6.25
SSSCA1-205ENST00000527920 HNRNPUL2Q1KMD3 747 aaKnown RBP54.08■■■■■ 6.25
SSSCA1-205ENST00000527920 COL17A1Q9UMD9 1497 aaPredicted RBP54.03■■■■■ 6.24
SSSCA1-205ENST00000527920 ABCA9Q8IUA7 1624 aa54.02■■■■■ 6.24
SSSCA1-205ENST00000527920 PLEKHD1A6NEE1 506 aa53.93■■■■■ 6.22
SSSCA1-205ENST00000527920 HECW1Q76N89 1606 aa53.87■■■■■ 6.21
SSSCA1-205ENST00000527920 CDK13Q14004 1512 aaKnown RBP53.82■■■■■ 6.21
SSSCA1-205ENST00000527920 PHLDB1Q86UU1 1377 aa53.8■■■■■ 6.2
SSSCA1-205ENST00000527920 AEBP2Q6ZN18 517 aaPredicted RBP53.78■■■■■ 6.2
SSSCA1-205ENST00000527920 ARAP3Q8WWN8 1544 aa53.74■■■■■ 6.19
SSSCA1-205ENST00000527920 NEO1Q92859 1461 aa53.7■■■■■ 6.19
SSSCA1-205ENST00000527920 ATP1B4Q9UN42 357 aaPredicted RBP53.67■■■■■ 6.18
SSSCA1-205ENST00000527920 CLIP1P30622 1438 aa53.67■■■■■ 6.18
SSSCA1-205ENST00000527920 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP53.63■■■■■ 6.18
SSSCA1-205ENST00000527920 CASKIN1Q8WXD9 1431 aa53.61■■■■■ 6.17
SSSCA1-205ENST00000527920 CDK11AQ9UQ88 783 aaPredicted RBP53.61■■■■■ 6.17
SSSCA1-205ENST00000527920 TTC37Q6PGP7 1564 aa53.53■■■■■ 6.16
SSSCA1-205ENST00000527920 PCF11O94913 1555 aaKnown RBP53.53■■■■■ 6.16
SSSCA1-205ENST00000527920 CCDC18Q5T9S5 1454 aa53.48■■■■■ 6.15
SSSCA1-205ENST00000527920 FYCO1Q9BQS8 1478 aa53.46■■■■■ 6.15
SSSCA1-205ENST00000527920 TROQ12816 1431 aaPredicted RBP53.46■■■■■ 6.15
SSSCA1-205ENST00000527920 KDM4FA0A1W2PPD8 638 aa53.46■■■■■ 6.15
SSSCA1-205ENST00000527920 LRRIQ1Q96JM4 1722 aa53.44■■■■■ 6.15
SSSCA1-205ENST00000527920 FANCAO15360 1455 aa53.43■■■■■ 6.14
SSSCA1-205ENST00000527920 CFAP74Q9C0B2 1584 aa53.43■■■■■ 6.14
SSSCA1-205ENST00000527920 PLCH2O75038 1416 aa53.36■■■■■ 6.13
SSSCA1-205ENST00000527920 AKNAQ7Z591 1439 aa53.36■■■■■ 6.13
SSSCA1-205ENST00000527920 KIF14Q15058 1648 aa53.35■■■■■ 6.13
SSSCA1-205ENST00000527920 RAPGEF3O95398 923 aa53.32■■■■■ 6.13
SSSCA1-205ENST00000527920 ADGRL1O94910 1474 aa53.29■■■■■ 6.12
SSSCA1-205ENST00000527920 FRMPD1Q5SYB0 1578 aa53.28■■■■■ 6.12
SSSCA1-205ENST00000527920 DENND4BO75064 1496 aaPredicted RBP53.27■■■■■ 6.12
SSSCA1-205ENST00000527920 CEP162Q5TB80 1403 aa53.27■■■■■ 6.12
SSSCA1-205ENST00000527920 MYO5CQ9NQX4 1742 aa53.2■■■■■ 6.11
SSSCA1-205ENST00000527920 RICTORQ6R327 1708 aa53.14■■■■■ 6.1
SSSCA1-205ENST00000527920 EFCAB2Q5VUJ9 269 aa53.14■■■■■ 6.1
SSSCA1-205ENST00000527920 ZMYM4Q5VZL5 1548 aa53.06■■■■■ 6.08
SSSCA1-205ENST00000527920 SCAPERQ9BY12 1400 aa53.04■■■■■ 6.08
SSSCA1-205ENST00000527920 POGZQ7Z3K3 1410 aa53.01■■■■■ 6.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms