RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 RUSC2Q8N2Y8 1516 aa38.8■■■■□ 3.8
LRRK1-206ENST00000527698 ERCC6L2Q5T890 1561 aa38.78■■■■□ 3.8
LRRK1-206ENST00000527698 SHROOM2Q13796 1616 aa38.78■■■■□ 3.8
LRRK1-206ENST00000527698 RAPGEF2Q9Y4G8 1499 aa38.63■■■■□ 3.77
LRRK1-206ENST00000527698 CSRNP3Q8WYN3 585 aa38.63■■■■□ 3.77
LRRK1-206ENST00000527698 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
LRRK1-206ENST00000527698 KIAA0586Q9BVV6 1533 aa38.47■■■■□ 3.75
LRRK1-206ENST00000527698 PRG4Q92954 1404 aaPredicted RBP38.46■■■■□ 3.75
LRRK1-206ENST00000527698 JPH4Q96JJ6 628 aa38.41■■■■□ 3.74
LRRK1-206ENST00000527698 FAM9AQ8IZU1 332 aaPredicted RBP38.4■■■■□ 3.74
LRRK1-206ENST00000527698 KIF13AQ9H1H9 1805 aa38.33■■■■□ 3.73
LRRK1-206ENST00000527698 KIF21BO75037 1637 aa38.3■■■■□ 3.72
LRRK1-206ENST00000527698 IQGAP2Q13576 1575 aa38.27■■■■□ 3.72
LRRK1-206ENST00000527698 CTTNBP2Q8WZ74 1663 aa38.27■■■■□ 3.72
LRRK1-206ENST00000527698 AEBP2Q6ZN18 517 aaPredicted RBP38.25■■■■□ 3.71
LRRK1-206ENST00000527698 MAPKBP1O60336 1514 aa38.14■■■■□ 3.7
LRRK1-206ENST00000527698 ADCY10Q96PN6 1610 aa38.1■■■■□ 3.69
LRRK1-206ENST00000527698 CARMIL2Q6F5E8 1435 aa38.1■■■■□ 3.69
LRRK1-206ENST00000527698 ABCC10Q5T3U5 1492 aa38.09■■■■□ 3.69
LRRK1-206ENST00000527698 UGGT2Q9NYU1 1516 aa38.08■■■■□ 3.69
LRRK1-206ENST00000527698 NPM1P06748 294 aaKnown RBP eCLIP38.08■■■■□ 3.69
LRRK1-206ENST00000527698 GOLGA3Q08378 1498 aa38.08■■■■□ 3.69
LRRK1-206ENST00000527698 DIP2BQ9P265 1576 aa38.01■■■■□ 3.67
LRRK1-206ENST00000527698 FAM69CQ0P6D2 419 aa37.98■■■■□ 3.67
LRRK1-206ENST00000527698 UBTFP17480 764 aaKnown RBP37.96■■■■□ 3.67
LRRK1-206ENST00000527698 DISP1Q96F81 1524 aa37.92■■■■□ 3.66
LRRK1-206ENST00000527698 TNIKQ9UKE5 1360 aa37.89■■■■□ 3.66
LRRK1-206ENST00000527698 KIAA0556O60303 1618 aa37.86■■■■□ 3.65
LRRK1-206ENST00000527698 PTPRGP23470 1445 aa37.83■■■■□ 3.65
LRRK1-206ENST00000527698 EHMT2Q96KQ7 1210 aa37.77■■■■□ 3.64
LRRK1-206ENST00000527698 SAMD9Q5K651 1589 aa37.74■■■■□ 3.63
LRRK1-206ENST00000527698 KDM6BO15054 1643 aa37.72■■■■□ 3.63
LRRK1-206ENST00000527698 EFCAB5A4FU69 1503 aa37.71■■■■□ 3.63
LRRK1-206ENST00000527698 ABCC2Q92887 1545 aa37.71■■■■□ 3.63
LRRK1-206ENST00000527698 TSPOAP1O95153 1857 aa37.71■■■■□ 3.63
LRRK1-206ENST00000527698 UHRF1BP1LA0JNW5 1464 aa37.64■■■■□ 3.62
LRRK1-206ENST00000527698 RANGAP1P46060 587 aaPredicted RBP37.6■■■■□ 3.61
LRRK1-206ENST00000527698 PLB1Q6P1J6 1458 aa37.59■■■■□ 3.61
LRRK1-206ENST00000527698 TTBK1Q5TCY1 1321 aaPredicted RBP37.59■■■■□ 3.61
LRRK1-206ENST00000527698 UACAQ9BZF9 1416 aa37.58■■■■□ 3.61
LRRK1-206ENST00000527698 GLI2P10070 1586 aa37.58■■■■□ 3.61
LRRK1-206ENST00000527698 ASXL2Q76L83 1435 aa37.56■■■■□ 3.6
LRRK1-206ENST00000527698 P3H3Q8IVL6 736 aa37.55■■■■□ 3.6
LRRK1-206ENST00000527698 PPRC1Q5VV67 1664 aaKnown RBP37.49■■■■□ 3.59
LRRK1-206ENST00000527698 KDM5BQ9UGL1 1544 aa37.46■■■■□ 3.59
LRRK1-206ENST00000527698 ARHGAP35Q9NRY4 1499 aa37.45■■■■□ 3.59
LRRK1-206ENST00000527698 FHOD3Q2V2M9 1422 aa37.44■■■■□ 3.58
LRRK1-206ENST00000527698 ABCA8O94911 1581 aa37.43■■■■□ 3.58
LRRK1-206ENST00000527698 CLIP1P30622 1438 aa37.38■■■■□ 3.57
LRRK1-206ENST00000527698 FMN1Q68DA7 1419 aa37.38■■■■□ 3.57
LRRK1-206ENST00000527698 LOC105371045A0A1W2PR82 267 aa37.38■■■■□ 3.57
LRRK1-206ENST00000527698 ZCCHC11Q5TAX3 1644 aaKnown RBP37.38■■■■□ 3.57
LRRK1-206ENST00000527698 EPRSP07814 1512 aaKnown RBP37.36■■■■□ 3.57
LRRK1-206ENST00000527698 KDM4FA0A1W2PPD8 638 aa37.36■■■■□ 3.57
LRRK1-206ENST00000527698 MAP3K4Q9Y6R4 1608 aa37.36■■■■□ 3.57
LRRK1-206ENST00000527698 RAPGEF6Q8TEU7 1601 aa37.33■■■■□ 3.57
LRRK1-206ENST00000527698 CEP162Q5TB80 1403 aa37.27■■■■□ 3.56
LRRK1-206ENST00000527698 TEX14Q8IWB6 1497 aa37.25■■■■□ 3.55
LRRK1-206ENST00000527698 WDR7Q9Y4E6 1490 aa37.19■■■■□ 3.54
LRRK1-206ENST00000527698 COL17A1Q9UMD9 1497 aaPredicted RBP37.17■■■■□ 3.54
LRRK1-206ENST00000527698 NUP153P49790 1475 aaKnown RBP37.14■■■■□ 3.54
LRRK1-206ENST00000527698 ATP10BO94823 1461 aa37.13■■■■□ 3.53
LRRK1-206ENST00000527698 HECW1Q76N89 1606 aa37.11■■■■□ 3.53
LRRK1-206ENST00000527698 CASKIN1Q8WXD9 1431 aa37.07■■■■□ 3.52
LRRK1-206ENST00000527698 CFAP43Q8NDM7 1665 aa37.06■■■■□ 3.52
LRRK1-206ENST00000527698 ADGRL1O94910 1474 aa37.06■■■■□ 3.52
LRRK1-206ENST00000527698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.03■■■■□ 3.52
LRRK1-206ENST00000527698 HNRNPUL2Q1KMD3 747 aaKnown RBP37.03■■■■□ 3.52
LRRK1-206ENST00000527698 FYCO1Q9BQS8 1478 aa37.01■■■■□ 3.52
LRRK1-206ENST00000527698 ATP1B4Q9UN42 357 aaPredicted RBP37.01■■■■□ 3.52
LRRK1-206ENST00000527698 MAGI3Q5TCQ9 1506 aa37■■■■□ 3.51
LRRK1-206ENST00000527698 CD109Q6YHK3 1445 aa36.96■■■■□ 3.51
LRRK1-206ENST00000527698 ARID3CA6NKF2 412 aa36.96■■■■□ 3.51
LRRK1-206ENST00000527698 CDK11AQ9UQ88 783 aaPredicted RBP36.96■■■■□ 3.51
LRRK1-206ENST00000527698 PCF11O94913 1555 aaKnown RBP36.95■■■■□ 3.51
LRRK1-206ENST00000527698 PLEKHD1A6NEE1 506 aa36.95■■■■□ 3.51
LRRK1-206ENST00000527698 CCDC18Q5T9S5 1454 aa36.94■■■■□ 3.5
LRRK1-206ENST00000527698 KCNH8Q96L42 1107 aa36.87■■■■□ 3.49
LRRK1-206ENST00000527698 CDK13Q14004 1512 aaKnown RBP36.85■■■■□ 3.49
LRRK1-206ENST00000527698 VPS8Q8N3P4 1428 aa36.84■■■■□ 3.49
LRRK1-206ENST00000527698 LRRIQ1Q96JM4 1722 aa36.82■■■■□ 3.49
LRRK1-206ENST00000527698 ARAP3Q8WWN8 1544 aa36.73■■■■□ 3.47
LRRK1-206ENST00000527698 ABCA9Q8IUA7 1624 aa36.71■■■■□ 3.47
LRRK1-206ENST00000527698 TROQ12816 1431 aaPredicted RBP36.68■■■■□ 3.46
LRRK1-206ENST00000527698 PHLDB1Q86UU1 1377 aa36.66■■■■□ 3.46
LRRK1-206ENST00000527698 HECW2Q9P2P5 1572 aa36.64■■■■□ 3.46
LRRK1-206ENST00000527698 KIF14Q15058 1648 aa36.6■■■■□ 3.45
LRRK1-206ENST00000527698 MAP3K1Q13233 1512 aa36.59■■■■□ 3.45
LRRK1-206ENST00000527698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.56■■■■□ 3.44
LRRK1-206ENST00000527698 APLP2Q06481 763 aa36.55■■■■□ 3.44
LRRK1-206ENST00000527698 NEO1Q92859 1461 aa36.54■■■■□ 3.44
LRRK1-206ENST00000527698 MTUS2Q5JR59 1369 aa36.53■■■■□ 3.44
LRRK1-206ENST00000527698 TIAM1Q13009 1591 aa36.52■■■■□ 3.44
LRRK1-206ENST00000527698 EHBP1L1Q8N3D4 1523 aa36.47■■■■□ 3.43
LRRK1-206ENST00000527698 TTC37Q6PGP7 1564 aa36.47■■■■□ 3.43
LRRK1-206ENST00000527698 MYO5CQ9NQX4 1742 aa36.43■■■■□ 3.42
LRRK1-206ENST00000527698 ILDR1Q86SU0 546 aaPredicted RBP36.43■■■■□ 3.42
LRRK1-206ENST00000527698 PLCH2O75038 1416 aa36.42■■■■□ 3.42
LRRK1-206ENST00000527698 CFAP74Q9C0B2 1584 aa36.41■■■■□ 3.42
LRRK1-206ENST00000527698 FRMPD1Q5SYB0 1578 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms