RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
SOX6-208ENST00000527619 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
SOX6-208ENST00000527619 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
SOX6-208ENST00000527619 BCL11BQ9C0K0 894 aaPredicted RBP10.53□□□□□ -0.72
SOX6-208ENST00000527619 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
SOX6-208ENST00000527619 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
SOX6-208ENST00000527619 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
SOX6-208ENST00000527619 EEA1Q15075 1411 aa10.52□□□□□ -0.73
SOX6-208ENST00000527619 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
SOX6-208ENST00000527619 FGD1P98174 961 aa10.51□□□□□ -0.73
SOX6-208ENST00000527619 KCNH8Q96L42 1107 aa10.51□□□□□ -0.73
SOX6-208ENST00000527619 SMARCA2P51531 1590 aa10.51□□□□□ -0.73
SOX6-208ENST00000527619 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
SOX6-208ENST00000527619 WIZO95785 1651 aa10.5□□□□□ -0.73
SOX6-208ENST00000527619 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
SOX6-208ENST00000527619 GOLGA3Q08378 1498 aa10.5□□□□□ -0.73
SOX6-208ENST00000527619 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
SOX6-208ENST00000527619 DEKP35659 375 aaKnown RBP10.5□□□□□ -0.73
SOX6-208ENST00000527619 DHX37Q8IY37 1157 aaKnown RBP10.5□□□□□ -0.73
SOX6-208ENST00000527619 SOGA1O94964 1423 aa10.49□□□□□ -0.73
SOX6-208ENST00000527619 ITGAEP38570 1179 aa10.49□□□□□ -0.73
SOX6-208ENST00000527619 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
SOX6-208ENST00000527619 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
SOX6-208ENST00000527619 PEG3Q9GZU2 1588 aa10.46□□□□□ -0.74
SOX6-208ENST00000527619 FBLN2P98095 1184 aa10.45□□□□□ -0.74
SOX6-208ENST00000527619 BAZ1BQ9UIG0 1483 aaKnown RBP10.45□□□□□ -0.74
SOX6-208ENST00000527619 GLIPR1L2Q4G1C9 344 aa10.43□□□□□ -0.74
SOX6-208ENST00000527619 A0A0U1RQG5 324 aaPredicted RBP10.43□□□□□ -0.74
SOX6-208ENST00000527619 TAF7LQ5H9L4 462 aa10.43□□□□□ -0.74
SOX6-208ENST00000527619 CDK11AQ9UQ88 783 aaPredicted RBP10.43□□□□□ -0.74
SOX6-208ENST00000527619 HMGXB3Q12766 1538 aa10.43□□□□□ -0.74
SOX6-208ENST00000527619 VPS8Q8N3P4 1428 aa10.43□□□□□ -0.74
SOX6-208ENST00000527619 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.74
SOX6-208ENST00000527619 CLIP1P30622 1438 aa10.4□□□□□ -0.74
SOX6-208ENST00000527619 AAMPQ13685 434 aa10.39□□□□□ -0.75
SOX6-208ENST00000527619 ZMYND15Q9H091 742 aa10.39□□□□□ -0.75
SOX6-208ENST00000527619 KIF21BO75037 1637 aa10.37□□□□□ -0.75
SOX6-208ENST00000527619 CEP164Q9UPV0 1460 aa10.37□□□□□ -0.75
SOX6-208ENST00000527619 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
SOX6-208ENST00000527619 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
SOX6-208ENST00000527619 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
SOX6-208ENST00000527619 RBM10P98175 930 aaKnown RBP10.34□□□□□ -0.75
SOX6-208ENST00000527619 CUX2O14529 1486 aa10.33□□□□□ -0.76
SOX6-208ENST00000527619 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
SOX6-208ENST00000527619 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
SOX6-208ENST00000527619 NOP58Q9Y2X3 529 aaKnown RBP10.31□□□□□ -0.76
SOX6-208ENST00000527619 PPP1R15AO75807 674 aaPredicted RBP10.3□□□□□ -0.76
SOX6-208ENST00000527619 ANP32CO43423 234 aa10.29□□□□□ -0.76
SOX6-208ENST00000527619 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
SOX6-208ENST00000527619 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
SOX6-208ENST00000527619 NBR1Q14596 966 aa10.29□□□□□ -0.76
SOX6-208ENST00000527619 RRBP1Q9P2E9 1410 aaKnown RBP10.28□□□□□ -0.76
SOX6-208ENST00000527619 MAPKBP1O60336 1514 aa10.27□□□□□ -0.77
SOX6-208ENST00000527619 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
SOX6-208ENST00000527619 PPP4R2Q9NY27 417 aa10.26□□□□□ -0.77
SOX6-208ENST00000527619 WDR97A6NE52 1622 aa10.25□□□□□ -0.77
SOX6-208ENST00000527619 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
SOX6-208ENST00000527619 IRX6P78412 446 aaPredicted RBP10.25□□□□□ -0.77
SOX6-208ENST00000527619 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
SOX6-208ENST00000527619 BRD2P25440 801 aaKnown RBP10.24□□□□□ -0.77
SOX6-208ENST00000527619 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
SOX6-208ENST00000527619 NESP48681 1621 aa10.24□□□□□ -0.77
SOX6-208ENST00000527619 PAK3O75914 559 aaPredicted RBP10.23□□□□□ -0.77
SOX6-208ENST00000527619 CADPSQ9ULU8 1353 aa10.23□□□□□ -0.77
SOX6-208ENST00000527619 NPM3O75607 178 aaKnown RBP10.22□□□□□ -0.77
SOX6-208ENST00000527619 RAPGEF2Q9Y4G8 1499 aa10.21□□□□□ -0.78
SOX6-208ENST00000527619 CCNB3Q8WWL7 1395 aa10.19□□□□□ -0.78
SOX6-208ENST00000527619 HNRNPUQ00839 825 aaKnown RBP eCLIP10.19□□□□□ -0.78
SOX6-208ENST00000527619 FBXO3Q9UK99 471 aa10.19□□□□□ -0.78
SOX6-208ENST00000527619 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
SOX6-208ENST00000527619 RAB3GAP2Q9H2M9 1393 aa10.19□□□□□ -0.78
SOX6-208ENST00000527619 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
SOX6-208ENST00000527619 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
SOX6-208ENST00000527619 ARAP1Q96P48 1450 aa10.16□□□□□ -0.78
SOX6-208ENST00000527619 PDS5BQ9NTI5 1447 aa10.16□□□□□ -0.78
SOX6-208ENST00000527619 IPO9Q96P70 1041 aaKnown RBP10.16□□□□□ -0.78
SOX6-208ENST00000527619 CFTRP13569 1480 aa10.16□□□□□ -0.78
SOX6-208ENST00000527619 ANP32AP39687 249 aaKnown RBP10.16□□□□□ -0.78
SOX6-208ENST00000527619 ZNF326Q5BKZ1 582 aaKnown RBP10.16□□□□□ -0.78
SOX6-208ENST00000527619 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
SOX6-208ENST00000527619 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
SOX6-208ENST00000527619 B4GALNT3Q6L9W6 998 aa10.15□□□□□ -0.78
SOX6-208ENST00000527619 WASHC2AQ641Q2 1341 aa10.14□□□□□ -0.79
SOX6-208ENST00000527619 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
SOX6-208ENST00000527619 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
SOX6-208ENST00000527619 SETD5Q9C0A6 1442 aa10.12□□□□□ -0.79
SOX6-208ENST00000527619 SIN3AQ96ST3 1273 aa10.12□□□□□ -0.79
SOX6-208ENST00000527619 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
SOX6-208ENST00000527619 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
SOX6-208ENST00000527619 IGSF3O75054 1194 aa10.1□□□□□ -0.79
SOX6-208ENST00000527619 FANCD2Q9BXW9 1451 aa10.1□□□□□ -0.79
SOX6-208ENST00000527619 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
SOX6-208ENST00000527619 ERICH3Q5RHP9 1530 aa10.09□□□□□ -0.79
SOX6-208ENST00000527619 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
SOX6-208ENST00000527619 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
SOX6-208ENST00000527619 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
SOX6-208ENST00000527619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
SOX6-208ENST00000527619 NAP1L2Q9ULW6 460 aaPredicted RBP10.05□□□□□ -0.8
SOX6-208ENST00000527619 CDK11BP21127 795 aaKnown RBP10.05□□□□□ -0.8
SOX6-208ENST00000527619 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms