RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
PPFIA1-209ENST00000527612 PRG4Q92954 1404 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-209ENST00000527612 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
PPFIA1-209ENST00000527612 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
PPFIA1-209ENST00000527612 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
PPFIA1-209ENST00000527612 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
PPFIA1-209ENST00000527612 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
PPFIA1-209ENST00000527612 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
PPFIA1-209ENST00000527612 KIAA0556O60303 1618 aa11.83□□□□□ -0.52
PPFIA1-209ENST00000527612 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
PPFIA1-209ENST00000527612 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
PPFIA1-209ENST00000527612 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
PPFIA1-209ENST00000527612 UGGT2Q9NYU1 1516 aa11.81□□□□□ -0.52
PPFIA1-209ENST00000527612 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
PPFIA1-209ENST00000527612 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
PPFIA1-209ENST00000527612 ABCC2Q92887 1545 aa11.75□□□□□ -0.53
PPFIA1-209ENST00000527612 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
PPFIA1-209ENST00000527612 ZCCHC11Q5TAX3 1644 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-209ENST00000527612 PPRC1Q5VV67 1664 aaKnown RBP11.74□□□□□ -0.53
PPFIA1-209ENST00000527612 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
PPFIA1-209ENST00000527612 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
PPFIA1-209ENST00000527612 TSPOAP1O95153 1857 aa11.72□□□□□ -0.53
PPFIA1-209ENST00000527612 TNIKQ9UKE5 1360 aa11.72□□□□□ -0.53
PPFIA1-209ENST00000527612 SAMD9Q5K651 1589 aa11.71□□□□□ -0.53
PPFIA1-209ENST00000527612 PTPRGP23470 1445 aa11.69□□□□□ -0.54
PPFIA1-209ENST00000527612 KDM5BQ9UGL1 1544 aa11.69□□□□□ -0.54
PPFIA1-209ENST00000527612 ABCA8O94911 1581 aa11.68□□□□□ -0.54
PPFIA1-209ENST00000527612 KIF21BO75037 1637 aa11.68□□□□□ -0.54
PPFIA1-209ENST00000527612 MAP3K4Q9Y6R4 1608 aa11.68□□□□□ -0.54
PPFIA1-209ENST00000527612 GLI2P10070 1586 aa11.67□□□□□ -0.54
PPFIA1-209ENST00000527612 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
PPFIA1-209ENST00000527612 GOLGA3Q08378 1498 aa11.65□□□□□ -0.54
PPFIA1-209ENST00000527612 KDM6BO15054 1643 aa11.64□□□□□ -0.55
PPFIA1-209ENST00000527612 PLB1Q6P1J6 1458 aa11.64□□□□□ -0.55
PPFIA1-209ENST00000527612 EEA1Q15075 1411 aa11.64□□□□□ -0.55
PPFIA1-209ENST00000527612 ASXL2Q76L83 1435 aa11.64□□□□□ -0.55
PPFIA1-209ENST00000527612 EPRSP07814 1512 aaKnown RBP11.6□□□□□ -0.55
PPFIA1-209ENST00000527612 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
PPFIA1-209ENST00000527612 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
PPFIA1-209ENST00000527612 WDR7Q9Y4E6 1490 aa11.58□□□□□ -0.56
PPFIA1-209ENST00000527612 FAM69CQ0P6D2 419 aa11.58□□□□□ -0.56
PPFIA1-209ENST00000527612 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
PPFIA1-209ENST00000527612 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
PPFIA1-209ENST00000527612 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
PPFIA1-209ENST00000527612 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
PPFIA1-209ENST00000527612 ABCA9Q8IUA7 1624 aa11.53□□□□□ -0.56
PPFIA1-209ENST00000527612 NUP153P49790 1475 aaKnown RBP11.51□□□□□ -0.57
PPFIA1-209ENST00000527612 FHOD3Q2V2M9 1422 aa11.5□□□□□ -0.57
PPFIA1-209ENST00000527612 TEX14Q8IWB6 1497 aa11.5□□□□□ -0.57
PPFIA1-209ENST00000527612 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
PPFIA1-209ENST00000527612 ATP10BO94823 1461 aa11.49□□□□□ -0.57
PPFIA1-209ENST00000527612 COL17A1Q9UMD9 1497 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-209ENST00000527612 MAGI3Q5TCQ9 1506 aa11.48□□□□□ -0.57
PPFIA1-209ENST00000527612 CHIC1Q5VXU3 224 aa11.47□□□□□ -0.57
PPFIA1-209ENST00000527612 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
PPFIA1-209ENST00000527612 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
PPFIA1-209ENST00000527612 ARHGAP35Q9NRY4 1499 aa11.44□□□□□ -0.58
PPFIA1-209ENST00000527612 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
PPFIA1-209ENST00000527612 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
PPFIA1-209ENST00000527612 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
PPFIA1-209ENST00000527612 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
PPFIA1-209ENST00000527612 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
PPFIA1-209ENST00000527612 PCF11O94913 1555 aaKnown RBP11.41□□□□□ -0.58
PPFIA1-209ENST00000527612 RICTORQ6R327 1708 aa11.4□□□□□ -0.58
PPFIA1-209ENST00000527612 CFAP74Q9C0B2 1584 aa11.39□□□□□ -0.59
PPFIA1-209ENST00000527612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.39□□□□□ -0.59
PPFIA1-209ENST00000527612 ARAP3Q8WWN8 1544 aa11.39□□□□□ -0.59
PPFIA1-209ENST00000527612 MYO5CQ9NQX4 1742 aa11.38□□□□□ -0.59
PPFIA1-209ENST00000527612 ADGRL1O94910 1474 aa11.38□□□□□ -0.59
PPFIA1-209ENST00000527612 ARID3CA6NKF2 412 aa11.37□□□□□ -0.59
PPFIA1-209ENST00000527612 KIF14Q15058 1648 aa11.37□□□□□ -0.59
PPFIA1-209ENST00000527612 NEO1Q92859 1461 aa11.36□□□□□ -0.59
PPFIA1-209ENST00000527612 ARHGEF40Q8TER5 1519 aa11.35□□□□□ -0.59
PPFIA1-209ENST00000527612 FMN1Q68DA7 1419 aa11.35□□□□□ -0.59
PPFIA1-209ENST00000527612 RANGAP1P46060 587 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-209ENST00000527612 SIGLEC1Q9BZZ2 1709 aa11.32□□□□□ -0.6
PPFIA1-209ENST00000527612 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
PPFIA1-209ENST00000527612 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
PPFIA1-209ENST00000527612 KCNH8Q96L42 1107 aa11.32□□□□□ -0.6
PPFIA1-209ENST00000527612 AEBP2Q6ZN18 517 aaPredicted RBP11.31□□□□□ -0.6
PPFIA1-209ENST00000527612 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
PPFIA1-209ENST00000527612 CDC42BPBQ9Y5S2 1711 aa11.3□□□□□ -0.6
PPFIA1-209ENST00000527612 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 EHMT2Q96KQ7 1210 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 FANCAO15360 1455 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 FYCO1Q9BQS8 1478 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
PPFIA1-209ENST00000527612 UBTFP17480 764 aaKnown RBP11.28□□□□□ -0.6
PPFIA1-209ENST00000527612 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
PPFIA1-209ENST00000527612 CCDC18Q5T9S5 1454 aa11.27□□□□□ -0.6
PPFIA1-209ENST00000527612 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
PPFIA1-209ENST00000527612 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
PPFIA1-209ENST00000527612 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
PPFIA1-209ENST00000527612 ITSN2Q9NZM3 1697 aa11.25□□□□□ -0.61
PPFIA1-209ENST00000527612 KDM5CP41229 1560 aa11.24□□□□□ -0.61
PPFIA1-209ENST00000527612 CLIP1P30622 1438 aa11.24□□□□□ -0.61
PPFIA1-209ENST00000527612 POGZQ7Z3K3 1410 aa11.24□□□□□ -0.61
PPFIA1-209ENST00000527612 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
PPFIA1-209ENST00000527612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms