RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 CEP162Q5TB80 1403 aa29.99■■■□□ 2.39
SMPD1-203ENST00000527275 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
SMPD1-203ENST00000527275 CEP170Q5SW79 1584 aa29.96■■■□□ 2.39
SMPD1-203ENST00000527275 NUP160Q12769 1436 aa29.95■■■□□ 2.38
SMPD1-203ENST00000527275 KIAA0586Q9BVV6 1533 aa29.9■■■□□ 2.38
SMPD1-203ENST00000527275 CLIP1P30622 1438 aa29.89■■■□□ 2.37
SMPD1-203ENST00000527275 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
SMPD1-203ENST00000527275 ARHGAP35Q9NRY4 1499 aa29.76■■■□□ 2.35
SMPD1-203ENST00000527275 JPH4Q96JJ6 628 aa29.74■■■□□ 2.35
SMPD1-203ENST00000527275 OSCARQ8IYS5 282 aa29.73■■■□□ 2.35
SMPD1-203ENST00000527275 P3H3Q8IVL6 736 aa29.71■■■□□ 2.35
SMPD1-203ENST00000527275 UGGT2Q9NYU1 1516 aa29.71■■■□□ 2.35
SMPD1-203ENST00000527275 EFCAB5A4FU69 1503 aa29.68■■■□□ 2.34
SMPD1-203ENST00000527275 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
SMPD1-203ENST00000527275 ARAP1Q96P48 1450 aa29.67■■■□□ 2.34
SMPD1-203ENST00000527275 SAMD9Q5K651 1589 aa29.65■■■□□ 2.34
SMPD1-203ENST00000527275 DISP1Q96F81 1524 aa29.62■■■□□ 2.33
SMPD1-203ENST00000527275 FHOD3Q2V2M9 1422 aa29.62■■■□□ 2.33
SMPD1-203ENST00000527275 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
SMPD1-203ENST00000527275 PRG4Q92954 1404 aaPredicted RBP29.57■■■□□ 2.32
SMPD1-203ENST00000527275 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
SMPD1-203ENST00000527275 CARMIL2Q6F5E8 1435 aa29.55■■■□□ 2.32
SMPD1-203ENST00000527275 VPS8Q8N3P4 1428 aa29.53■■■□□ 2.32
SMPD1-203ENST00000527275 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
SMPD1-203ENST00000527275 ERCC6L2Q5T890 1561 aa29.46■■■□□ 2.31
SMPD1-203ENST00000527275 FMN1Q68DA7 1419 aa29.44■■■□□ 2.3
SMPD1-203ENST00000527275 PCGF6Q9BYE7 350 aa29.4■■■□□ 2.3
SMPD1-203ENST00000527275 PTPRGP23470 1445 aa29.33■■■□□ 2.29
SMPD1-203ENST00000527275 PCF11O94913 1555 aaKnown RBP29.33■■■□□ 2.29
SMPD1-203ENST00000527275 ATP1B4Q9UN42 357 aaPredicted RBP29.32■■■□□ 2.28
SMPD1-203ENST00000527275 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
SMPD1-203ENST00000527275 FYCO1Q9BQS8 1478 aa29.27■■■□□ 2.28
SMPD1-203ENST00000527275 TRIM26Q12899 539 aaPredicted RBP29.27■■■□□ 2.28
SMPD1-203ENST00000527275 PLB1Q6P1J6 1458 aa29.27■■■□□ 2.28
SMPD1-203ENST00000527275 APLP2Q06481 763 aa29.24■■■□□ 2.27
SMPD1-203ENST00000527275 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
SMPD1-203ENST00000527275 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
SMPD1-203ENST00000527275 RAPGEF6Q8TEU7 1601 aa29.2■■■□□ 2.26
SMPD1-203ENST00000527275 ABCA8O94911 1581 aa29.17■■■□□ 2.26
SMPD1-203ENST00000527275 ARID3CA6NKF2 412 aa29.16■■■□□ 2.26
SMPD1-203ENST00000527275 HECW1Q76N89 1606 aa29.16■■■□□ 2.26
SMPD1-203ENST00000527275 NUP153P49790 1475 aaKnown RBP29.15■■■□□ 2.26
SMPD1-203ENST00000527275 UACAQ9BZF9 1416 aa29.14■■■□□ 2.26
SMPD1-203ENST00000527275 LRRIQ1Q96JM4 1722 aa29.13■■■□□ 2.25
SMPD1-203ENST00000527275 EPRSP07814 1512 aaKnown RBP29.1■■■□□ 2.25
SMPD1-203ENST00000527275 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
SMPD1-203ENST00000527275 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
SMPD1-203ENST00000527275 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
SMPD1-203ENST00000527275 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
SMPD1-203ENST00000527275 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
SMPD1-203ENST00000527275 MAP3K1Q13233 1512 aa29.08■■■□□ 2.25
SMPD1-203ENST00000527275 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
SMPD1-203ENST00000527275 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
SMPD1-203ENST00000527275 ABCC2Q92887 1545 aa29.05■■■□□ 2.24
SMPD1-203ENST00000527275 CFAP43Q8NDM7 1665 aa29.04■■■□□ 2.24
SMPD1-203ENST00000527275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.03■■■□□ 2.24
SMPD1-203ENST00000527275 HNRNPUL2Q1KMD3 747 aaKnown RBP29.03■■■□□ 2.24
SMPD1-203ENST00000527275 UHRF1BP1LA0JNW5 1464 aa29■■■□□ 2.23
SMPD1-203ENST00000527275 ATP10BO94823 1461 aa28.99■■■□□ 2.23
SMPD1-203ENST00000527275 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
SMPD1-203ENST00000527275 LRRC9Q6ZRR7 1453 aa28.98■■■□□ 2.23
SMPD1-203ENST00000527275 ADCY10Q96PN6 1610 aa28.97■■■□□ 2.23
SMPD1-203ENST00000527275 MTUS2Q5JR59 1369 aa28.93■■■□□ 2.22
SMPD1-203ENST00000527275 MAGI3Q5TCQ9 1506 aa28.92■■■□□ 2.22
SMPD1-203ENST00000527275 KDM5BQ9UGL1 1544 aa28.91■■■□□ 2.22
SMPD1-203ENST00000527275 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
SMPD1-203ENST00000527275 PLEKHD1A6NEE1 506 aa28.85■■■□□ 2.21
SMPD1-203ENST00000527275 ZCCHC11Q5TAX3 1644 aaKnown RBP28.85■■■□□ 2.21
SMPD1-203ENST00000527275 EHBP1L1Q8N3D4 1523 aa28.83■■■□□ 2.21
SMPD1-203ENST00000527275 TROQ12816 1431 aaPredicted RBP28.8■■■□□ 2.2
SMPD1-203ENST00000527275 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
SMPD1-203ENST00000527275 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
SMPD1-203ENST00000527275 HRCP23327 699 aa28.76■■■□□ 2.19
SMPD1-203ENST00000527275 NCOA2Q15596 1464 aa28.74■■■□□ 2.19
SMPD1-203ENST00000527275 SUPT6HQ7KZ85 1726 aaKnown RBP28.74■■■□□ 2.19
SMPD1-203ENST00000527275 PHLDB1Q86UU1 1377 aa28.72■■■□□ 2.19
SMPD1-203ENST00000527275 KIF14Q15058 1648 aa28.69■■■□□ 2.18
SMPD1-203ENST00000527275 KCNH8Q96L42 1107 aa28.68■■■□□ 2.18
SMPD1-203ENST00000527275 ASXL2Q76L83 1435 aa28.67■■■□□ 2.18
SMPD1-203ENST00000527275 WDR7Q9Y4E6 1490 aa28.65■■■□□ 2.18
SMPD1-203ENST00000527275 MYOM3Q5VTT5 1437 aa28.58■■■□□ 2.17
SMPD1-203ENST00000527275 CCNB3Q8WWL7 1395 aa28.58■■■□□ 2.17
SMPD1-203ENST00000527275 ABCC10Q5T3U5 1492 aa28.57■■■□□ 2.16
SMPD1-203ENST00000527275 MAPKBP1O60336 1514 aa28.56■■■□□ 2.16
SMPD1-203ENST00000527275 RRBP1Q9P2E9 1410 aaKnown RBP28.55■■■□□ 2.16
SMPD1-203ENST00000527275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.54■■■□□ 2.16
SMPD1-203ENST00000527275 FGD6Q6ZV73 1430 aa28.52■■■□□ 2.16
SMPD1-203ENST00000527275 GPATCH8Q9UKJ3 1502 aaKnown RBP28.52■■■□□ 2.16
SMPD1-203ENST00000527275 TTC37Q6PGP7 1564 aa28.52■■■□□ 2.16
SMPD1-203ENST00000527275 CDC42BPAQ5VT25 1732 aa28.47■■■□□ 2.15
SMPD1-203ENST00000527275 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
SMPD1-203ENST00000527275 FAM50AQ14320 339 aaKnown RBP28.45■■■□□ 2.15
SMPD1-203ENST00000527275 MIA2Q96PC5 1412 aa28.45■■■□□ 2.15
SMPD1-203ENST00000527275 ITSN2Q9NZM3 1697 aa28.44■■■□□ 2.14
SMPD1-203ENST00000527275 ABCA9Q8IUA7 1624 aa28.42■■■□□ 2.14
SMPD1-203ENST00000527275 PTPN23Q9H3S7 1636 aa28.4■■■□□ 2.14
SMPD1-203ENST00000527275 ZNF644Q9H582 1327 aaPredicted RBP28.4■■■□□ 2.14
SMPD1-203ENST00000527275 ZNF777Q9ULD5 760 aaPredicted RBP28.4■■■□□ 2.14
SMPD1-203ENST00000527275 MYO5CQ9NQX4 1742 aa28.39■■■□□ 2.14
SMPD1-203ENST00000527275 PREX2Q70Z35 1606 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms