RNA–Protein interactions for RNA: ENST00000527226.2

TPT1-208, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-208ENST00000527226 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
TPT1-208ENST00000527226 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
TPT1-208ENST00000527226 CHD1O14646 1710 aa23.21■■□□□ 1.31
TPT1-208ENST00000527226 NUP160Q12769 1436 aa23.16■■□□□ 1.3
TPT1-208ENST00000527226 RANGAP1P46060 587 aaPredicted RBP23.15■■□□□ 1.3
TPT1-208ENST00000527226 CEP170Q5SW79 1584 aa23.14■■□□□ 1.3
TPT1-208ENST00000527226 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
TPT1-208ENST00000527226 CTTNBP2Q8WZ74 1663 aa23.09■■□□□ 1.29
TPT1-208ENST00000527226 CEP162Q5TB80 1403 aa23.08■■□□□ 1.28
TPT1-208ENST00000527226 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
TPT1-208ENST00000527226 CLIP1P30622 1438 aa23.03■■□□□ 1.28
TPT1-208ENST00000527226 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
TPT1-208ENST00000527226 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
TPT1-208ENST00000527226 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
TPT1-208ENST00000527226 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
TPT1-208ENST00000527226 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
TPT1-208ENST00000527226 UGGT2Q9NYU1 1516 aa22.95■■□□□ 1.26
TPT1-208ENST00000527226 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
TPT1-208ENST00000527226 P3H3Q8IVL6 736 aa22.94■■□□□ 1.26
TPT1-208ENST00000527226 ARHGAP35Q9NRY4 1499 aa22.92■■□□□ 1.26
TPT1-208ENST00000527226 EFCAB5A4FU69 1503 aa22.91■■□□□ 1.26
TPT1-208ENST00000527226 PRG4Q92954 1404 aaPredicted RBP22.9■■□□□ 1.26
TPT1-208ENST00000527226 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.25
TPT1-208ENST00000527226 SAMD9Q5K651 1589 aa22.86■■□□□ 1.25
TPT1-208ENST00000527226 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
TPT1-208ENST00000527226 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
TPT1-208ENST00000527226 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
TPT1-208ENST00000527226 ARHGEF11O15085 1522 aa22.84■■□□□ 1.25
TPT1-208ENST00000527226 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
TPT1-208ENST00000527226 ARAP1Q96P48 1450 aa22.83■■□□□ 1.25
TPT1-208ENST00000527226 KIAA0556O60303 1618 aa22.82■■□□□ 1.24
TPT1-208ENST00000527226 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
TPT1-208ENST00000527226 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
TPT1-208ENST00000527226 FMN1Q68DA7 1419 aa22.73■■□□□ 1.23
TPT1-208ENST00000527226 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
TPT1-208ENST00000527226 PTPRGP23470 1445 aa22.72■■□□□ 1.23
TPT1-208ENST00000527226 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
TPT1-208ENST00000527226 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
TPT1-208ENST00000527226 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
TPT1-208ENST00000527226 PCF11O94913 1555 aaKnown RBP22.59■■□□□ 1.21
TPT1-208ENST00000527226 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
TPT1-208ENST00000527226 APLP2Q06481 763 aa22.58■■□□□ 1.21
TPT1-208ENST00000527226 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
TPT1-208ENST00000527226 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
TPT1-208ENST00000527226 RAPGEF6Q8TEU7 1601 aa22.54■■□□□ 1.2
TPT1-208ENST00000527226 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
TPT1-208ENST00000527226 ABCA8O94911 1581 aa22.53■■□□□ 1.2
TPT1-208ENST00000527226 HECW1Q76N89 1606 aa22.52■■□□□ 1.2
TPT1-208ENST00000527226 NUP153P49790 1475 aaKnown RBP22.49■■□□□ 1.19
TPT1-208ENST00000527226 ABCC2Q92887 1545 aa22.47■■□□□ 1.19
TPT1-208ENST00000527226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
TPT1-208ENST00000527226 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
TPT1-208ENST00000527226 UHRF1BP1LA0JNW5 1464 aa22.45■■□□□ 1.18
TPT1-208ENST00000527226 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
TPT1-208ENST00000527226 EPRSP07814 1512 aaKnown RBP22.45■■□□□ 1.18
TPT1-208ENST00000527226 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
TPT1-208ENST00000527226 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
TPT1-208ENST00000527226 TIAM1Q13009 1591 aa22.39■■□□□ 1.18
TPT1-208ENST00000527226 ATP10BO94823 1461 aa22.39■■□□□ 1.17
TPT1-208ENST00000527226 ADCY10Q96PN6 1610 aa22.39■■□□□ 1.17
TPT1-208ENST00000527226 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
TPT1-208ENST00000527226 NPM1P06748 294 aaKnown RBP eCLIP22.37■■□□□ 1.17
TPT1-208ENST00000527226 CDK11AQ9UQ88 783 aaPredicted RBP22.37■■□□□ 1.17
TPT1-208ENST00000527226 KANK4Q5T7N3 995 aaPredicted RBP22.36■■□□□ 1.17
TPT1-208ENST00000527226 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
TPT1-208ENST00000527226 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
TPT1-208ENST00000527226 KDM5BQ9UGL1 1544 aa22.34■■□□□ 1.17
TPT1-208ENST00000527226 MTUS2Q5JR59 1369 aa22.34■■□□□ 1.17
TPT1-208ENST00000527226 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
TPT1-208ENST00000527226 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
TPT1-208ENST00000527226 ZCCHC11Q5TAX3 1644 aaKnown RBP22.29■■□□□ 1.16
TPT1-208ENST00000527226 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
TPT1-208ENST00000527226 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
TPT1-208ENST00000527226 TROQ12816 1431 aaPredicted RBP22.24■■□□□ 1.15
TPT1-208ENST00000527226 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
TPT1-208ENST00000527226 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
TPT1-208ENST00000527226 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
TPT1-208ENST00000527226 NCOA2Q15596 1464 aa22.15■■□□□ 1.14
TPT1-208ENST00000527226 SUPT6HQ7KZ85 1726 aaKnown RBP22.14■■□□□ 1.13
TPT1-208ENST00000527226 KIF14Q15058 1648 aa22.13■■□□□ 1.13
TPT1-208ENST00000527226 MAPKBP1O60336 1514 aa22.11■■□□□ 1.13
TPT1-208ENST00000527226 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
TPT1-208ENST00000527226 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
TPT1-208ENST00000527226 ABCC10Q5T3U5 1492 aa22.05■■□□□ 1.12
TPT1-208ENST00000527226 MYOM3Q5VTT5 1437 aa22.04■■□□□ 1.12
TPT1-208ENST00000527226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
TPT1-208ENST00000527226 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
TPT1-208ENST00000527226 GPATCH8Q9UKJ3 1502 aaKnown RBP21.99■■□□□ 1.11
TPT1-208ENST00000527226 FAM69CQ0P6D2 419 aa21.98■■□□□ 1.11
TPT1-208ENST00000527226 CFDP1Q9UEE9 299 aaPredicted RBP21.98■■□□□ 1.11
TPT1-208ENST00000527226 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
TPT1-208ENST00000527226 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
TPT1-208ENST00000527226 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
TPT1-208ENST00000527226 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
TPT1-208ENST00000527226 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
TPT1-208ENST00000527226 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
TPT1-208ENST00000527226 RRBP1Q9P2E9 1410 aaKnown RBP21.94■■□□□ 1.1
TPT1-208ENST00000527226 CD109Q6YHK3 1445 aa21.93■■□□□ 1.1
TPT1-208ENST00000527226 ITSN2Q9NZM3 1697 aa21.93■■□□□ 1.1
TPT1-208ENST00000527226 DIP2BQ9P265 1576 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms